Phocoena sinus (vaquita): 116744668
Help
Entry
116744668 CDS
T07759
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116744668 (NPAS1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116744668 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
116744668
NCBI-ProteinID:
XP_032470601
Ensembl:
ENSPSNG00000021101
UniProt:
A0A8C9EAH6
LinkDB
All DBs
Position
19:complement(8446312..8462864)
Genome browser
AA seq
594 aa
AA seq
DB search
MAAPYPSSGGGGEVRCGGGRGGSVPWDFLPGFVVKTPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSAGPQAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SLFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIEASPIEVP
PSSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAE
LPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDL
LDKGQVMTGYYRWLQRAGGFVWLQSVATVAMSGKSPGERHVLWVSYVLSQAEGGQIPLDA
FQLPASVAHEDTSSPEPAPTEPEPPVEGKQAVPPQEDKDPQPRGKPIKVEPGPGETEDLE
DSGDEKPSGHLAPTRPEFTSVIRAGALKQDLVGPWGLAPPGDPPPSLLHTGFLPPVVRGL
CAPGTIRYGPAELGLVYPHLQRLGPGPTLPEAFYPALGLPYAGPLGTRVQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctaccccagcagtggcggtggaggcgaggtcaggtgcgggggaggtcgc
ggcggcagcgtcccttgggactttctgccagggttcgtggtcaagaccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccgtaacgcggcgcgctcgcggcgcggaaag
gagaacctggagttcttcgagctggccaagctactcccgctgcccggagccatctccagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcgccgcttc
gccgctctcggggcgccaccctggggtttgaggtccgcggggccgcaggctggcctagcc
ccaggccgcaggggccccgtggcgctggtctccgaagtcttcgagcagcacctgggagga
cacatcctgcagtccctggacggcttcgtgtttgccttgaaccaggaagggaagttcctc
tacatctcagagacagtctccatttatctgggtctctcacaggtggagctaacgggcagc
agcctcttcgactacattcatccgggggaccactccgaggtgctggagcaactggggttg
cgggccccgacccccggaccccccaccccgccctccgtcccctcctcttcctcctcctcg
tcctcgtcctcctcgcttgcggatacccctgagatagaggccagccccatcgaggtgccc
ccctcctcccgggtccaggagcgctccttcttcatccgcatgaaatccaccctcaccaag
agggggctgcacgtcaaggcctcagggtacaaggtcatccatgtgaccggtcgccttcgg
gcccgcgccctgggccttgtggcccttggccacacgttgcccccggccccactggctgag
ctgccgctgcacggacacatgatcgtcttccgactcagcctgggtctcaccatccttgct
tgtgagagcagagtcagcgaccacatggacctggggccctcggagctagtgggccgcagc
tgctaccagtttgtccacggacaggatgcaaccaggatccgccaaagccacctggacctg
ctggacaagggccaggtgatgaccggttactaccgttggctgcagcgcgccgggggcttc
gtgtggctacagtccgtggccaccgtggccatgagcgggaagagccctggagagcgtcac
gtgctctgggtcagctacgtgctcagtcaagccgaggggggccagatacctctggatgcc
ttccagcttccggccagcgtggcccatgaggacacgtccagcccggagccagcacccaca
gagccagagccaccagtggaaggaaagcaggccgtccccccgcaggaggacaaggacccc
cagccccggggcaaacccatcaaagtggagcccggcccgggggagactgaagacctggag
gacagtggggatgagaagccatccggccacctggccccaacgaggcccgagttcacgtcg
gtcatccgggcgggggccctgaagcaggacctggtggggccgtggggcctggcacctcct
ggggaccccccaccttccctcctgcacactggcttcctgccccccgtggtgcggggcctg
tgcgcacctggcaccatccgctacggccctgccgagctgggcctcgtgtacccgcacctg
cagaggctgggcccgggccccaccctccccgaggccttctaccccgcgctgggcctgccc
tacgcggggcccctgggcaccagggtgcagcggaagggggactga
DBGET
integrated database retrieval system
