KEGG   Phocoena sinus (vaquita): 116744768
Entry
116744768         CDS       T07759                                 
Symbol
BCO1
Name
(RefSeq) LOW QUALITY PROTEIN: beta,beta-carotene 15,15'-dioxygenase
  KO
K00515  beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu00830  Retinol metabolism
psiu01100  Metabolic pathways
psiu01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00830 Retinol metabolism
    116744768 (BCO1)
Enzymes [BR:psiu01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.63  beta-carotene 15,15'-dioxygenase
     116744768 (BCO1)
SSDB
Motif
Pfam: RPE65
Other DBs
NCBI-GeneID: 116744768
NCBI-ProteinID: XP_032470727
LinkDB
Position
19:52248170..52305463
AA seq 742 aa
MDIIFGRNKKEQLEPLRARVTGRIPAWLQGTLLRNGPGMHTVGETRYNHWFDGLALLHSF
TIRDGEVYYRSKYLRSDTYNANIEANRIVVSGFGTMAYPDPCKNIFSKAFSYLSHTIPDF
TDNCLINIMKCGEDFYATMETNYIRKINPQTLETLEKVDYRKHVAVNLATSHPHYDDAGN
VLNIGTSIVDKGKTKYVIFKIPATVSGGGKKGLSPLKHMEVFCSIASHSLLSPSYYHSFG
VTESYIVFLEQPFKMDILKMATAYLRGASWASCLAFHREDKTXIHIIDQRTRKSVLTKFY
TDPMVVFHHVNAYEEDSCLLFDVIAYEDSSLYQLFYLAKLNKNFEENSRLTSVPALKRFA
VPLHMDKNADTGSNLIKLSSTTARALKEEEDQVYCQPELRYEGLELPRINYAHNGKRYRY
VFAAEVQWSPIPSKIIKYDILTKSSLKWGEVHCWPAEPVFVPTPGAEDEDHGIILSAIVS
ADPHKLPFLLVLDARTFTELAHASVDVEMHLDLHGLFIPGADWDAGKQAPSREERDRAAE
RRVAPRPGRVGARALENCSTRLKGGPSLGGGQGGPSFYFALILSMESGLSDQVQTQGHCP
GCRAAAGSSLSRSSASREAGVFLDKRSLSAADRARQRPFGDQQLSRRNEASDWQPPATPG
EREGTKAQGRRAEMTQHRGSLKAPDSRAAHGAGAFRKISILLASLGAGPGRRARAGCADG
ACAGRGRLERSVWAASGARPAG
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggatataatatttggcagaaataagaaggaacaactggagcctctgagggccagagtg
acaggcaggattccagcatggctgcaggggaccctgctccgcaatgggcctgggatgcac
acagtgggcgagaccagatacaaccactggttcgatggcctggccttgctccacagcttc
acaatcagagacggtgaagtctattacaggagcaaatacctgagaagtgatacctacaat
gccaatattgaagcgaataggattgtggtgtcaggatttggaacaatggcctatccagac
ccctgcaaaaacatattttccaaagctttctcctacctgtcccacaccatccctgatttc
acagacaactgtctgatcaacatcatgaagtgtggagaagacttctatgcaaccatggag
accaattacatcaggaaaatcaatccccagaccctggaaaccctggagaaggttgattat
cgtaaacatgtggctgtaaatctggcaacatcacatcctcattatgatgacgctggaaat
gttctcaacattggtacgtccatcgtggacaaggggaagacaaaatatgtgatctttaag
atccctgccacagtatcagggggcgggaagaaggggctgagccccctgaaacacatggag
gtgttctgctccatcgcctcgcactcgctcctctccccgagctattaccacagcttcgga
gtcaccgagagctacatcgttttcctcgaacagcctttcaagatggatatcctcaagatg
gcaaccgcctacctccggggcgcaagctgggcttcctgcctggctttccacagggaggac
aagacttaaattcacatcattgaccaaaggacgaggaagtccgtgctgaccaaattttac
acggaccccatggtggtgtttcatcacgtcaatgcctacgaagaggacagttgccttctg
ttcgacgtcattgcctacgaggacagcagcctttaccagctcttctacttggccaagctg
aacaagaacttcgaggagaactccaggctcacctccgtcccagccctcaagaggtttgca
gtgcccctccacatggacaagaacgcagacacgggctccaatttaatcaaactgtcatct
acaacagcaagagccctgaaggaagaagaggaccaagtctactgccagccggagttgcgt
tatgaaggcttagagctgcctcggatcaattacgctcacaacgggaagcgataccgttat
gtctttgctgctgaagtccagtggagccccatcccaagcaagataataaaatacgacatt
ctcacgaagtcatccttgaagtggggagaggtgcactgctggccggcggagccagtgttc
gtgcccacaccaggtgccgaggacgaggatcacgggattatcttatcagccattgtctct
gccgatccccataagctgccctttctgctggttctggatgccaggacttttacggaattg
gctcatgcctctgttgatgtagagatgcacctggatctccacgggctgttcatcccaggt
gctgactgggatgcagggaagcaggccccttcccgggaggagcgggacagggctgctgag
cgccgtgtggccccaaggcctggcagggtgggggcccgggccctggagaactgctccacc
agactcaagggtggtccctccctgggtggggggcaggggggcccttcattttattttgca
cttattctttccatggagtctggactcagcgaccaggtgcagacgcagggccactgccct
ggctgccgggctgcagcaggaagcagtctctcgaggtcaagcgccagcagggaggctgga
gttttcttggacaagcgatcgctctcagcggcggaccgcgcccggcagcgcccgttcggg
gaccagcagctcagtaggaggaacgaggcttcggattggcagcctccggcgacgccgggg
gagagggagggcacaaaggcgcaggggcgtcgcgcagaaatgacgcaacaccgcggctcc
ttaaaggcgccggactctcgagcggcgcacggcgcaggcgcgttccggaagatctcgatt
ttgctcgcatcgctgggagccggcccgggcagacgggcgcgagcgggctgtgcagacggg
gcgtgcgctggacgcgggcggctcgagaggtccgtttgggcggcgtccggagcccgaccg
gcgggctga

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