Phocoena sinus (vaquita): 116744776
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Entry
116744776 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: somatostatin receptor type 3-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04020
Calcium signaling pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116744776
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116744776
04081 Hormone signaling
116744776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
psiu04030
]
116744776
G protein-coupled receptors [BR:
psiu04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
116744776
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
116744776
NCBI-ProteinID:
XP_032470736
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Position
19:complement(58341203..58347499)
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AA seq
580 aa
AA seq
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MRQNKRLTDYLRHRPEGASLFCPSPGQAVTSRAPGPCVSLGPGSLERQVFIAQREARLLV
WTPPGVPSPSSACAATVENGSGPGSPSAVSLVPSEAVPSPEYEMVSVFLVFLVCVVGIVG
NAMVVLTTRDMHMPTNGYLVSLALADLTVLVAAGLPTVSKSLAGQWVCGHAGCLGITCLR
YLGIRASNSSVPAFAAEREVHPNPSCRPGLPGHEPWCASPSDTRCVVAGVWGTTSVYCLF
WFFLVALDAGGHRGATACTCPSACWTFTARGTNSGASMGVVRTGQSSEPRGGSSRGPGGA
AGSLPWSQSLPFFQEEGAMSLGHLVCQVPGASHPCPPALQVTPMLVVVVPLFAVLWMPYR
TLVLLCSFVARPFLDPWGPLFCRTCVYTNSAIDPIIYSLTSPKFRXAFQRLCGGGMEEPQ
RRTAGLISTSYGVDPRRRRPAGVGSQALRQLGRHSSRRGLVSAPSEGCPPPAQPLSPPSV
CSCAGSCPLVAGRARRGETLLCQRLFWVPSAFPPHERGRVTCPSSGPVAGLHLGSSLPSS
GSGGGGVGAGRSWEGASLHWCMVRTFHLLLFIRLSTLFST
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagaacaagcggctcactgactatttacggcacaggccagaaggagcatccctg
ttctgtccctcgcctggccaagcagtcacgtcacgggcgccaggtccctgcgtgtccctg
gggccaggctctctggagaggcaggtgttcatcgcgcagcgtgaggcccggctgctggtg
tggacgcctcccggagtcccctccccctccagcgcctgcgcagccaccgtggaaaacggg
agcgggccgggcagccccagcgccgtgtccctggttcccagtgaggccgtccccagccct
gagtacgagatggtctcggtcttcctggtgttccttgtgtgcgtggtgggcattgtgggc
aacgccatggtggtgctgaccacacgggacatgcacatgcccaccaacggctacctggtc
agcctggccctggcagaccttactgtgctggtggctgccgggctgcccaccgtctccaaa
agcttggctgggcagtgggtctgcggccatgccggctgcctgggcatcacctgcttgcgg
tacctgggcatccgtgcctccaactcctccgtcccggcgttcgccgcggagagggaggta
caccccaacccctcctgcaggcctggacttcctggccacgagccttggtgtgcctcgcca
tctgatacccgatgcgtcgtggccggcgtctgggggaccacgtccgtctactgcctgttc
tggttcttcctggtggccttggatgctggcgggcaccggggggccacagcctgcacctgc
ccatcagcctgctggaccttcaccgctcgggggaccaactcgggggccagcatgggggtg
gtgaggaccggccagagctcggaacccaggggaggcagctcccgtgggccagggggtgca
gcgggcagcttgccctggagccagagtctccccttcttccaggaagaaggagccatgtcc
cttggtcacttggtgtgccaggtgccgggggcttcccacccctgccctcccgccctgcag
gtcaccccgatgctggtggtagtcgtgccactctttgccgtcctgtggatgccctaccgc
acactggtgcttctctgctcctttgtggcccggcctttcctggacccctgggggcccctc
ttctgccgcacctgtgtctacaccaacagcgccatcgaccccatcatctacagcctcacg
tccccgaagttccggnctgccttccagcggctgtgcgggggcgggatggaggagccacag
aggcgcacggctggcctcatctccaccagctacggcgtggaccccagaagacgcagaccc
gcgggagtggggtcacaggccctcaggcagctgggccgccactccagcaggaggggcctg
gtttcagcaccgtctgagggctgccctccccctgcccagcccctctcgcctccctcggtt
tgctcctgtgctgggtcctgtccgctggtggctggcagggccaggagaggggagacactc
ctttgccaacggctcttctgggtccccagtgccttccctccccatgaacgaggacgggtc
acgtgtcctagttctggcccggtggctggactccatttgggtagctccctcccctcctct
ggaagtgggggggggggggtaggagcaggaagaagctgggagggtgccagccttcactgg
tgtatggttaggaccttccatctgttattattcattcgcttaagcactctgttttccacc
tga
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