Phocoena sinus (vaquita): 116744794
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Entry
116744794 CDS
T07759
Symbol
ANKRD27
Name
(RefSeq) ankyrin repeat domain-containing protein 27 isoform X1
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116744794 (ANKRD27)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116744794 (ANKRD27)
Others
Specific organelles associated proteins
Melanosome
116744794 (ANKRD27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
VPS9
Ank_KRIT1
ANK_LRRK2
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
116744794
NCBI-ProteinID:
XP_032470757
Ensembl:
ENSPSNG00000020465
LinkDB
All DBs
Position
19:17910740..17964317
Genome browser
AA seq
1147 aa
AA seq
DB search
MKKGNTHGLCMEVGSGPALSASGEGAACCSVSPSNIPGCVLQEHIRETLFAPSEVHMALY
DEDLLKNPFYLALQKWRPDLCNKVAQTRGIVLVPCKGSLSGSVQSTCQFESYILIPVEEH
FQTLNGKDVFIQGNRIKLGAGFACLLSVPILFEETFYNEKEESFSILCIAHPLEKRESSE
EPSTPSDPFSLKTIEDVREFLGRHAERFDRNIASFQRTFRECERKSLRHHIDSVNALYTR
CLQQLLRDSHLKVLAKQEAQMNLMKQAVEMYVQHDIYDLIFKYVGTMEASEDAAFNKITR
SLQDLQQKDIGVKPEFSFNIPRAKRELAQLNRCTSPQQKLACLWKVVQLITQSPSQRVNL
ETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSSAKDELGYCLTSVEAAIEYIRQ
GSLSIKPPESEGFGDRLFLKQRMSLLSQLTSTPIDCLFQHIASGNQKEVERLLSQEDRDK
DAVQKMCHPLCFCDDCEKLVSGRLNDPSIVTPFSRDDRGHTPLHVAALCGQASLIDFLVS
KGAVVNATDYHGSTPLHLACQKGCQSVTLLLLHYKASAEVQDNNGNTPLHLACTYGHEDC
VKALVYYDVQSCRLDIGNEKGDTPLHIAARWGYQSIIETLLQNGASTEIQNRLKETPLKC
ALNSKILSMMEAHHPSFEREQKSSEVPARPPQCSVDSISQGSCASSFSSASLSSRQEEPR
KFYREPTEQTMAWMYPSPAGGEPSLTPPRAPPSLSPPGCDLLSEGPVEKLLRAIADGDLE
MVRYLLEWTEEDPDEVEDAVRAVDLEFCHPLCQCPKCAPAQKKLAKIPASGLGVNVTNQD
GSSPLHVAALHGRADLLLLLVKHGASVGARDAKQAVPLHLACQKGHFQVVKCLLDSNAKP
NKKDISGNTPLLYACSRGHHEVAALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLL
LHGASVQVLNKRQCTAIDCAEQNSKIMELLQVVPSCVATLDDVGETDHNEYVTVKIRKKW
NSKMYDLPDEPFTRQFYFVHSVGQFKGRTSREIMARDRSVPNFAEDSLREPGRQRVTRKQ
NNLADQSSSQTADKGNDGQPERPGPRQTAPGQRRMLRRHIVNDAVVPKGPETAGNLTTPQ
EASISQS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggaaatactcatggactttgcatggaggttggaagtggtccagcgttgtca
gcatctggggaaggtgcagcatgctgcagtgtctctcctagcaacattcctggatgtgtg
ctccaggaacacataagggagactctttttgccccatctgaagtccatatggctctgtat
gatgaggacctcctgaaaaatcccttctatctggctcttcaaaagtggcgtcctgacttg
tgcaacaaggtggcccaaacccgtggcattgtgttagtaccctgcaaaggaagcctgtca
ggcagtgttcagtctacttgtcaatttgagtcctatattttgatcccagtggaagaacac
tttcagaccttaaatggaaaggatgtctttatccaaggaaacaggattaaactaggagct
ggtttcgcctgtcttctctcagtgcccattctctttgaagaaactttctacaatgaaaaa
gaagaaagtttcagcatactgtgcatagcccatcctttggaaaagagagagagttcagaa
gagccttcaacaccctcagatcccttttccctgaaaaccatcgaagacgtgagagagttt
ttgggaagacatgcagagagatttgacaggaacatcgcttctttccagcgaacgttcaga
gagtgtgaaagaaagagcctccgtcatcacatagactccgtgaatgctctctacaccaga
tgcctccagcagctgctgagggactcccacctgaaagtgctcgccaagcaggaggcccag
atgaacctgatgaaacaggctgtagagatgtatgtccagcacgatatttacgacctgatc
tttaaatatgtggggaccatggaggcaagtgaggatgctgcctttaacaaaatcacaagg
agccttcaagatcttcagcagaaggatattggtgtgaaacctgagttcagcttcaacata
cctcgtgccaagagggagctggctcagctgaacaggtgcacgtccccacagcagaagctg
gcttgtttgtggaaggtggtgcagctgatcacccagtctcccagccagagagttaacttg
gagaccatgtgtgctgatgatctgctatcagtcctgttgtatttgcttgtgaaaacggag
atccctaattggatggcaaatttgagttatatcaaaaacttccgatttagcagctcagca
aaagatgaactgggatactgcctgacctcagttgaggctgcaattgaatatattcggcag
ggaagcctctccattaagccaccggagtccgagggatttggcgacagactgttccttaag
cagagaatgagcttgctgtctcagctgacctcaactcccattgactgcttgtttcagcac
atcgcatcaggtaaccagaaagaagtggaaagacttctgagccaggaagaccgagataaa
gatgccgtccaaaagatgtgtcaccctctgtgcttctgtgatgactgtgagaaactcgtc
tcagggaggctgaatgacccctccattgtcactccattctccagagacgacaggggtcat
acaccgctccatgtggctgccctctgcgggcaggcatccctcatcgactttctggtttcc
aagggcgcggtggtgaacgctacagactaccatggctccaccccgctgcatcttgcgtgt
cagaagggctgtcagagcgtgacgctgctgctgctgcactacaaagccagcgccgaagtg
caagacaacaacggcaacacccctctgcacctggcctgcacctacggccacgaagactgt
gtgaaggctctggtctactatgacgtgcagtcctgcagactagatattggtaacgagaaa
ggagacactcccctgcacattgctgcccgctggggttaccaaagcatcatagagacgttg
ctacagaacggagcgtccacagagatccagaacaggctgaaggaaacgcccctcaagtgt
gcgttaaactcaaagattctgtccatgatggaagcccaccatccgtccttcgagagggag
cagaagtcttcagaggtgcccgcgcggccccctcagtgctccgtggattccatcagccag
ggctcctgcgcttccagcttctcatccgcgtcgctgagctccaggcaagaggagcccaga
aagttctacagggagcccacagagcagaccatggcgtggatgtacccatcccctgcaggt
ggggagccctcactgactccgccccgggctcctccttcgctgtcacccccaggctgtgac
ctgctctcggagggcccagtagaaaaacttttaagagccattgctgatggagacctagaa
atggtgcgttacctgttggagtggacagaggaggacccggatgaagtggaggatgctgtc
agggcggtggatcttgaattttgtcaccccttgtgccagtgccccaaatgtgctccagct
caaaagaagctggcaaagattcctgccagtgggcttggtgtgaatgtgaccaaccaggat
ggttcctccccactgcacgttgctgccctgcatggtcgggcggacctccttctcctcctc
gtgaagcacggtgccagtgtgggggccagagacgcaaagcaggccgtcccactccacctg
gcctgccagaagggccacttccaggtggtgaaatgtctactagattctaatgcaaaaccc
aataaaaaggatataagtggaaacacacccctcctttatgcttgttccagaggccaccac
gaagttgcggcactgttgctgcagcatggggcctccattaatgcttctaacaataagggc
aacacagcactgcacgaggctgtgatagaaaagcacgtcttcgtggtggagctgcttctg
cttcatggagcatcagttcaggtcttgaacaagaggcagtgcacagctatagactgtgct
gaacagaattcaaaaataatggaattgcttcaggtagtaccaagctgtgtggccacgtta
gatgatgttggagaaacagaccacaacgagtacgttactgtcaagatcaggaaaaaatgg
aactccaaaatgtatgatctaccagatgaaccttttacaagacagttttactttgtccac
tcagttggtcagtttaagggaaggacctcaagggagattatggcaagagatagaagtgtc
cctaattttgctgaagattctttgcgtgagccagggaggcaaagagtcactcggaagcag
aataacctggcagaccagagcagctctcagacagctgacaaaggaaacgatggtcagccg
gagaggcctggaccgagacaaactgctcctggacaaaggcgaatgctccgtagacacata
gtcaatgatgccgttgtacccaagggcccagagactgctggcaacctgaccactccccaa
gaggctagcatttcccaatcttaa
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