Phocoena sinus (vaquita): 116744996
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Entry
116744996 CDS
T07759
Symbol
UBTF
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116744996 (UBTF)
03021 Transcription machinery [BR:
psiu03021
]
116744996 (UBTF)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116744996 (UBTF)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116744996 (UBTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
DUF4473
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
116744996
NCBI-ProteinID:
XP_032471069
Ensembl:
ENSPSNG00000017372
UniProt:
A0A8C9CE79
LinkDB
All DBs
Position
20:complement(40770806..40786930)
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AA seq
757 aa
AA seq
DB search
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
FLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEE
KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGKLPESPKR
AEEIWQQSVIGDYLARFKNDREKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSE
RRAPPATANSSKKMKFQGEPKKPPMNGYQKFSQELLSNGQLNHLPLKERMVEIGSRWQRI
SQSQKEHYKKQAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLRGPNPKSS
RTTLQSKSESEDDDEEDEEEEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED
DDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaagccgactgccccacagacctggaaatggccgcccccaaaggccaagac
cgctggtcccaggaagacatgctgactttgctggaatgcatgaagaacaaccttccatcc
aatgacagctccaagttcaaaaccactgagtcacatatggactgggaaaaagtagcattt
aaagacttttctggagacatgtgcaagctcaaatgggtggagatttctaacgaggtgagg
aagttccgtacgttgacagaattgatcctcgatgctcaggaacatgttaaaaacccttac
aaaggcaaaaaactcaagaaacacccggacttcccaaagaagcccctgaccccttatttc
cgctttttcatggagaagcgggccaagtacgcaaaactccaccccgagatgagcaacctg
gacctgaccaagattctgtccaagaaatacaaagagttgccagagaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagtttgagcgaaacctcgcccgattcagg
gaggatcacccagacctaatccagaatgccaagaagtcggacatccctgagaagcccaaa
accccccagcagctgtggtacacccacgagaagaaggtgtacctcaaagtgcggccagac
gccactacgaaggaggtgaaggactccctggggaagcagtggtctcagctctcggacaaa
aagaggctgaaatggattcataaggccctggagcagcggaaggagtacgaggagattatg
cgagactatatccagaagcaccccgagctcaacatcagtgaggagggcatcaccaagtcc
accctcaccaaggccgaacgccagctcaaggacaagtttgacgggcgacccaccaagcca
cctccgaacagctactcgctgtactgcgcagagctgatggccaacatgaaggacgtgccc
agtacagagcgcatggtgctgtgcagccagcagtggaagctgctctcccagaaggagaag
gatgcctaccacaagaagtgcgaccagaaaaagaaagattatgaggtggaactgctccgt
tttctagagagcctgcctgaggaggagcagcagcgggtcctgggggaggagaagatgttg
aacatcaacaagaagcaagccaccagcccagcctccaagaagccctcccaggaagggggc
aagggtggctcggagaagcccaagaggcccgtgtcagccatgttcatcttctcggaagaa
aagcggcggcagctgcaggaagagcggcctgagctttcagagagcgagctgacccgcctg
ctggcccgcatgtggaacgacctgtcagagaagaaaaaggccaagtacaaggcccgggag
gccgccctgaaggcccagtcggagaggaagccgggcaagctgccagagtcgcccaaaaga
gccgaggagatctggcaacagagcgtcatcggcgactacctggcccgcttcaagaatgac
cgggagaaggccttgaaagccatggagatgacttggaacaacatggaaaagaaggagaaa
ctaatgtggattaagaaggcggccgaagaccaaaagcgatatgagagagagctgagtgag
aggcgggcacccccggctactgcaaactcatccaagaagatgaagttccagggagaaccc
aagaagcctcccatgaacggttaccagaagttctcccaggagcttctgtccaacgggcag
ctgaaccacctgccactgaaggagcgcatggtggagattggcagccgctggcagcgcatc
tcccagagccagaaggagcactacaaaaagcaggccgaggagcagcagaagcagtacaaa
gtgcacctggacctctgggtcaagagtctgtctccccaggaccgtgcagcatataaagag
tacatctcgaataaacgtaagagcatgaccaagctgcgaggcccgaaccccaagtccagc
cggacgaccctgcagtctaagtcggagtctgaggatgacgatgaagaggatgaggaggag
gaggaggaggaggaggaggaggaagatgatgagaacggggactcctctgaggatgggggg
gactcttccgaatccagcagcgaggatgagagcgaggatggggatgagaacgaggaggat
gacgacgacgaggacgacgacgaggacgacgacgaggatgaggacaacgagtccgagggc
agcagctccagctcctcctcctcgggggactcctcggactctgactccaactga
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