Phocoena sinus (vaquita): 116745001
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Entry
116745001 CDS
T07759
Symbol
SSH2
Name
(RefSeq) protein phosphatase Slingshot homolog 2 isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04360
Axon guidance
psiu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116745001 (SSH2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116745001 (SSH2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116745001 (SSH2)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116745001 (SSH2)
3.1.3.48 protein-tyrosine-phosphatase
116745001 (SSH2)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
116745001 (SSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
116745001
NCBI-ProteinID:
XP_032471086
Ensembl:
ENSPSNG00000013352
LinkDB
All DBs
Position
20:14795739..15039034
Genome browser
AA seq
1449 aa
AA seq
DB search
MALVTVQRSPTPSTTSSPCASSSHLEDSESAALLCCEREESEIFSDSNEADSGEEECRSQ
PRSISESFLTVKGAALFLPRGNGSSTPRISHRRNKHAGDLQQHLQAMFILLRPEDNIRLA
VRLESTYQNRTRYMVVVSTNGRQDTEESIVLGMDFSSNDSSTCTMGLVLPLWSDTLIHLD
GDGGFSVSTDNRVHIFKPVSVQAMWSALQSLHKACEVARMHNYYPGSLFLTWVSYYESHI
NSDQSSVNEWNAMQDVQSHRPDSPALFTDIPTERERTERLIKTKLREIMMQKDLENITSK
EIRTELEMQMVCNLREFKEFIDNEMIVILGQMDSPTQIFEHVFLGSEWNASNLEDLQNRG
VRYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHCK
MGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLASKQRH
NKLWRSHSDSDLSDHHEPICKAGLELNKKEITTSADQIAEVKTMENHPPIPPVFVEHVVP
QDENQKGLCTKERMICLEFTSREFHAGQIEDELNLNDINGCSSGCCLNESKFPLDNCHAS
KALIQPGQDPEMANKFPDLTVEDLETDALKADMNVHLLPMEELTSRLKDLPMSPDPDSPS
PQPSCQAEVSDFSTDRIDFFSALEKFVELSQETRARSFSHSRMEELGGGRSESCRLSVVE
VAPSEATADDQRSSSLSNTPHASEESSIDEEQSKAISELVSPDIFMQSHSENAISVKEIV
TEIESISQGVGQIQVKGDILSIPCHTPKKHIVHELPLERAQATENKPGNLEQSGGSCTAQ
PELAKDSGKWEPEGCPVAHSSTTELEEEEPAEGELELWGPGMPPGAKWCPGSVRRATLEF
EERLRQEQEQHGAAAACASLSTRKNSKNDSSSVADQASKGRSDEATLEHAFVPREPEMSK
GKGKCSGSEAGSLPHSEQHAIVPAPELPESHPLPAPQKCPGSGPRTQQEGVLKEQRTLVS
CQGPETPAVPLPLPKKIEIIEYTHTVTTPDHGPEGETATSEKSGEQGLRKVKVEESITVL
CALDENLNRTLSPDRASLHPRALPLPHSSSPEPEHGRPAHPAPTLSSPGDWGNSPAAALE
TAAPFVSHSTHVLGDSLAYLHPQTVVHLEGFTEQSSTTDNEPSAEKGSWEESQEGPLSRG
SEVPYQGSQLSSEDLCLISRLGNSVGEQQEKLDPSPVACQLPHSPSSDGIKGLSHSPSGV
KERAKEIESREISQVGLPKPSQMRRSASLTKLGYLDLCKDCLPERGPICSESPHLKLLQP
FLRMGSGMEAQEPPENPDAPQNLEPTKCFIEQLKTTECIAQSKPVERPLVQYAKEFGSSQ
QCLLPRAGPELTSSEGGLPLVQTQGLQGAGPAPGLAVVPRQQHGRTHPLRRLKKANDKKR
TTNPFYNTM
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctttggtcacggtccagcggtcgcctacccccagcactacctccagcccctgcgcc
tcgagctctcatttggaagacagtgaatccgcagcattactttgctgtgaacgtgaagaa
tcagaaatctttagtgattccaatgaggcagacagtggggaggaggaatgccgatcacag
cccaggagcatcagcgagagctttctaacggtcaaaggtgctgccctttttctgccacgg
ggaaatggctcatccacaccaagaatcagccacagacgcaataagcatgcaggtgacctc
caacagcatctccaagcaatgttcatattactccgcccagaagacaacatcaggctggct
gtaagactagaaagtacttaccagaatcgaacacgctatatggtagtggtttcaactaac
ggtagacaagacactgaagaaagcatcgtcctaggaatggatttctcctctaatgacagt
agcacttgtaccatgggtttagtcctgcctctctggagtgacaccctaattcatttggat
ggtgatggtgggttcagcgtatcaacagataacagagttcacatattcaaacctgtgtct
gtgcaggcaatgtggtctgcattacagagtctacacaaggcttgtgaagtcgccagaatg
cataactactaccctggcagcctgtttctcacctgggtgagttattatgagagccatatc
aactcagatcaatcctcagtcaatgaatggaatgctatgcaggatgtgcagtcccaccgg
cctgactctccagctcttttcacagacataccaactgaacgtgagcgaacagaaaggcta
attaaaaccaaattaagggagattatgatgcagaaggatttggagaatatcacatccaaa
gagatacgaactgaattggaaatgcaaatggtgtgcaacttgcgagaattcaaggaattt
atagataatgaaatgatagtgatccttggtcagatggatagccctacacagatatttgag
cacgtgttcttgggctcggaatggaatgcctctaacttagaggatttgcagaaccgaggg
gtgcgatatatcttgaatgtcactcgagagatagataacttcttcccaggagtctttgag
tatcacaacattcgggtatatgatgaagaggcaacggatctcctggcttactggaatgac
acttacaaattcatctctaaagcaaagaaacacggatctaaatgccttgtgcactgcaaa
atgggggtaagtcgctcagcctccactgtgattgcctatgcgatgaaggagtatggctgg
aatctggaccgagcctatgactacgtgaaggaaagacgaacagtgaccaagcccaacccc
agcttcatgagacagctggaagagtaccaggggatcttgctggcaagcaaacagcggcat
aacaagctctggcgatctcattcagatagtgacctctcagaccaccacgaacccatctgc
aaagcaggactagaactcaacaagaaggagatcaccacctcagcagaccagattgccgag
gtcaagaccatggagaatcacccacccatacctcccgtcttcgtggaacatgtcgtccca
caggatgaaaatcagaaaggcctgtgtaccaaagaaagaatgatctgcttggagtttact
tctagggaatttcatgccggacagattgaagatgaattaaacctaaatgacatcaatgga
tgctcatcagggtgttgtctcaatgaatcaaaattccctcttgacaactgccatgcatcc
aaagccttaatccaacctggacaggacccagaaatggccaacaagttcccagacttaaca
gtggaagatttggagacagacgcactgaaagcagacatgaacgtccacttactgcccatg
gaagaattgacatcccgcctgaaagatctccccatgtcccctgatcctgactcaccgagc
ccccaacccagttgccaggctgaagtctcagatttcagtacagatcgcattgactttttt
agcgcgctagagaagtttgtagagctttcccaagaaacccgggcccgatctttttctcac
tcaaggatggaggaactgggtggaggaaggagcgagagctgtcgactgtcagtggtcgaa
gtagccccttccgaggcgaccgctgatgaccagagaagcagctctctgagtaatactccc
catgcatctgaagaatcttcaatagatgaggaacagtcaaaggcaatctcggaactggtc
agcccagacatcttcatgcagtctcactcagaaaatgcaatttcagtcaaagaaatcgtc
actgagatcgaatccatcagtcaaggagttggacagattcaagtgaaaggcgacatccta
tccattccatgccatacaccaaagaagcacatcgtccatgagctgccccttgagagggcc
caagccacagagaacaaacctggaaatctggagcagagtggaggttcctgcacagcccag
cctgaactagccaaagactcagggaagtgggagccagaagggtgcccagtggcacactca
tccaccacagagttggaagaagaggaaccagctgagggggaactagagctctggggccca
gggatgcccccgggtgccaagtggtgccccgggtccgtgaggcgagccaccttggagttt
gaggagcgcttgcggcaggagcaggagcagcacggtgctgccgctgcttgtgcctcgttg
tccactcggaagaattccaagaatgattcttcttctgtggcagatcaggcatcaaaaggg
aggagtgatgaagccaccctagaacatgcatttgtccccagggaaccagagatgagcaag
ggcaaagggaaatgcagtgggtctgaggctggctccctaccccattctgagcagcatgcc
atcgttccagcacccgagctgccggagtctcacccgttgccagctcctcagaagtgccca
gggtcaggtcccagaacacagcaggaaggagtcctgaaggagcagaggactttggtctca
tgccagggacctgagacaccagcagtccctctgcctcttcccaagaagatagaaatcatt
gaatacacccacacagtcacgacacctgatcacgggccagagggggaaacagccaccagc
gaaaagagtggggagcagggactgaggaaagtgaaagtggaggagtccatcactgtcctc
tgtgcgctggatgaaaatctgaaccggacactgagccccgaccgggcttctctgcacccc
agagcgctacctctgcctcactcttcctctcccgagcctgagcacggcaggcccgcccac
ccagcccccaccctgagcagccctggagactggggcaacagcccagcagctgccctggaa
acggcagcgccttttgtcagtcactcgacccacgtacttggtgacagcttggcttacctg
catccccagacagtggttcacctggaaggcttcacagagcaaagcagcaccacagacaat
gagccctctgcggagaagggcagctgggaggagagtcaggagggccccctctccaggggc
agtgaagtgccatatcagggctcccagttaagtagcgaagacctgtgtttaattagcaga
ctcggtaacagtgttggggagcagcaagaaaaactggacccatcacctgtagcctgtcag
ctcccacacagccctagtagtgacggtataaagggtctcagtcacagccccagtggggtg
aaggaacgcgctaaagaaatcgagtcccgagagatttcccaggtagggctccccaaacca
tcgcaaatgaggcgttcagcttccctcaccaagttaggttacctggacctctgtaaagac
tgtttaccggagagggggcctatctgctctgagtcccctcatctcaaactgcttcagccc
ttcctcagaatgggctcgggaatggaggcccaggagcccccagaaaacccagatgctccc
cagaacctagagcccaccaagtgtttcatagagcaactcaaaacaacagagtgtatcgca
cagagcaagccggtggagaggccccttgtacagtatgccaaagaatttggttccagtcag
cagtgtttgctccccagggcaggacctgaattgactagttctgaaggaggccttcctttg
gtacagacccagggactgcagggtgcaggcccagctccagggctggctgtagtgccccgt
cagcagcacggcagaactcaccccctaaggagactgaaaaaagcaaatgataaaaaacgg
acaaccaaccccttctataataccatgtga
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integrated database retrieval system
