Phocoena sinus (vaquita): 116745045
Help
Entry
116745045 CDS
T07759
Symbol
FAAP100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116745045 (FAAP100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116745045 (FAAP100)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116745045 (FAAP100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Motif
Other DBs
NCBI-GeneID:
116745045
NCBI-ProteinID:
XP_032471236
Ensembl:
ENSPSNG00000015599
UniProt:
A0A8C9C8H2
LinkDB
All DBs
Position
20:47043625..47053891
Genome browser
AA seq
882 aa
AA seq
DB search
MAGLAPRVEYLAGFCCPLGGLAAGKPRVLCHGAEVFLSTGSELVYVYDREGRLLIAVYKF
PGQVWHLELLALRRALYVLCARSGIYCLSLDQASRSVSRDDKDDRDDQDSEDGQVDELPV
PVIPVHPDTCVLPSATLHAFTVLDDVLITLSQGPTQWKVQLFECPCPGEDPRPGGQIGEV
ELSTCTPPAGSLGEPTVPRFLPVLCCASPPGSRAPHGHPWGSGGVTLEGALFGLLFGSDA
SLLESPVILCGLPDGQLCCVVLKTLVTSRSAPGDPKALVKILHHLEEPVIFIGALRTEPL
SEDVEDVYCDCLVALGHHGRTLAIKASWDEAGHLVPELREYSLPGPVLCAARGRGGRVYH
STPSDLCVVDLAQEVSPWDLTQRDGAPGGLPSLLCPASLSVCSVVTLSVSSRAPEGGAEL
LALSAKGRLMTCSLDPHSETPHPTRVTSASAGQKIKELLSGIGTVSERVSSLKKAVDQRD
KALTCLNEAMNVSCALLSSREGPRPISCTISTSWSRLQLQDVLTATCLLENSSGFSLDRG
WALCVQVLRSSRALDLDSAVSAITYTIPVDQLGPGGQREVTLPLGPGEDGALDLPVTVSC
ALFYSLREVVGGALAVTDPFKDPSSNECTPDVLPEQDGVCLPLSEHTVDMLQGLRFPGLA
APHTQALGPLSPARDPIHTFLETCCGPVSQPAGPASLRAKYLPPSVATIKVSAELLRAAL
GDSHAGVSLCSATLQWLLAENAVADIVRAQALSSVQGVAPDGTDVHLVVREVAVTDLCPA
GPIQAMEIQVESSSLANMCRAHHAIVRRLQRLVMEQAARGSSPPDLRLQYLHQIQANHET
LLREVQTLRDRLCTEDEASSCATAQRLLQVYRQLRSPSLLLL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctcgcgccgcgggtcgaatacctggcgggcttctgctgcccgctcgggggc
ctggcggcgggcaagcctcgcgtgctgtgccacggggcggaggtcttcctgtccaccggg
agcgagctggtctatgtctacgaccgggaggggcggctgctgatcgccgtgtacaagttt
cccggtcaggtgtggcacctggagctcttggcccttcggagggcgctctacgttctgtgc
gcccggagtggcatctactgcttgtctttggaccaggcgagcaggtctgtgagccgggat
gacaaggatgacagggacgaccaggacagtgaggatgggcaggtcgatgagctccctgtc
cctgtgatccccgtgcacccagacacctgtgtgctccccagtgccacactgcatgccttc
accgtgctcgatgacgtgctcatcaccctgtcacagggccccacccagtggaaggtgcag
ctgtttgagtgtccgtgtccaggggaggaccctaggcccggaggccagattggcgaggtg
gagttgtccacctgcacccccccagctgggagcctgggggagcccacagttccccgcttc
ctcccagtgctgtgctgtgcgtcaccaccaggctccagggccccacatggccacccgtgg
ggctctgggggcgtcacgctggagggggccctctttggactactctttggatccgatgcc
tcccttctggagtcgcccgtgatcctctgcggtctccccgatggccagctctgctgtgtg
gtcctcaagaccctggtcacctccaggtctgcccctggtgatccgaaggcccttgtcaag
atcctccatcacctggaagagcctgtcatcttcattggagccttgaggacagagccgctg
tccgaggatgtggaggacgtgtactgtgactgcctggtggcacttggtcaccatggccgg
acactggccatcaaggccagctgggacgaggcagggcatctggtgccagagctgcgggag
tacagcctcccggggcctgtgctctgtgcagcccgcggcaggggcggccgtgtgtaccac
agcaccccctcggacctctgtgtagtggacctggctcaggaggtctccccctgggacctc
acgcagcgtgacggggccccaggaggcctgccctctctgctgtgtccagccagcttgagt
gtctgcagcgtcgtcaccctctctgtgtcatctagggcgcctgaagggggtgctgagctc
ctggccctgtctgccaaaggccggctgatgacctgcagcctggacccgcactctgagacg
cctcaccccaccagagtgacctcggcgagtgctggccaaaaaattaaggagttgctgtct
ggaattggcactgtctctgagagagtgtcttctctgaagaaggcggttgaccagcgggac
aaggccctgacctgcctcaacgaagccatgaacgtgagctgcgccctgctgtcgagccgg
gagggtcccaggcccatctcctgcaccatcagcacctcctggagccgcctgcagctgcag
gacgtgctgacagctacctgcctgctggagaacagcagtggcttcagcctggaccggggc
tgggccctgtgcgtccaggtgctccgcagctcccgggccttagacctggactcggctgtc
tcggccatcacctacaccatccctgtggaccagcttggccctggcggtcagcgtgaggtg
acgctgcctctgggcccgggagaggacggtgcgcttgacctgcccgtgaccgtgtcctgc
gcactcttctacagcctcagggaggtcgtgggtggggccctcgccgtcacggaccctttc
aaggacccctcttcgaatgaatgcacccctgacgtcctgcctgagcaggacggcgtgtgc
ctgcccctgagcgagcacacggtggacatgctgcagggcctgcgcttccccggcctggct
gcaccccacacgcaggccctgggcccactcagccctgccagagaccccatccacaccttc
ctggaaacttgctgcgggccagtcagccagcctgcaggaccagcgtccctgcgggccaag
tacctgcccccgtcagtggccaccatcaaggtgtcggcagagttgctcagggccgcctta
ggggacagtcacgcaggcgtgtccctgtgttctgccaccctgcagtggcttcttgccgag
aatgccgtcgcggacatcgtgagggcccaagcactgtcctccgtccagggagtggcccca
gatggcactgatgtccacctcgtcgtccgcgaggtggctgtgaccgacctgtgcccagca
gggcccatccaggccatggagatccaggtggagagctcctctctggccaacatgtgcagg
gcacaccacgccatcgtcaggcgtttgcagaggctggtcatggagcaggctgcccggggc
tccagcccgcctgacctccgcctgcagtatctccaccagatccaggccaaccatgagacg
ctgctgcgggaggtgcagaccctgcgggaccggctgtgcacggaggacgaagccagctcc
tgtgccaccgcccagaggctcctgcaggtgtacaggcagctccgcagccccagcctcctc
ctgctgtga
DBGET
integrated database retrieval system
