Phocoena sinus (vaquita): 116745214
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Entry
116745214 CDS
T07759
Name
(RefSeq) protoheme IX farnesyltransferase, mitochondrial isoform X1
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00190
Oxidative phosphorylation
psiu00860
Porphyrin metabolism
psiu01100
Metabolic pathways
psiu01240
Biosynthesis of cofactors
psiu04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
116745214
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
116745214
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
116745214
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psiu01006
]
116745214
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116745214
Enzymes [BR:
psiu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
116745214
Prenyltransferases [BR:
psiu01006
]
Compound prenylation
Protoheme farnesyltransferase
116745214
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
116745214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
116745214
NCBI-ProteinID:
XP_032471649
Ensembl:
ENSPSNG00000016801
LinkDB
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Position
20:complement(3659471..3769900)
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AA seq
632 aa
AA seq
DB search
MLLTTPRRGSGARSPRASLPASDNEYGKAVTDGAGSWGHRPQNHFLPAPRRPKSIPEVSA
SGPQAARGRPCPRARPLGSGQGCWPRGGRRRSAVARGLSSEASAAPRSSRPAKVPQVPCP
RPSALQPGGRSTPLRPQPSTSASRPPEVTTRKLPLLSRGAGKRRWRHPAAGEERGRGDPG
GPPDSCVMAASPHTLSSRVMTGWVGGCVWYLERRALQESPRRFLHLLRNVNQQWVTFQHF
NFLRHMYVTQLNRSFNQQMKPKPEPVASPFLEKASLDEAKAEIYEMRPLSPPSLSLSRKP
NEKESIELEPTPVIEGSIAVGTETKEEKQWKEMKLRVDDLPGILARLSKIKLTALVVSTT
SAGFALAPAPFDWPCFLLTFVGTGLASCAANSINQVSFFEVPFDSNMNRTKNRPLVRGQI
SPLLAVSFATCCAVPGVALLTWGVNPLTGALGLFNIFLYTCCYTPLKRISIANTWVGAVV
GAIPPLMGWTAATGSLDAGACLLGGILYSWQFPHFNALSWGLREDYSRGGYCMMSVTHPD
LCRRVALRHCLALVAMSAAAPALDVTTWTFPVIALPINLYISYLSFRFYRDADRKSSRKL
FFCSLWHLPLFLLLMLTCKRPAAQGDAGGPQS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgacgactcctcggcgtggctcaggggccaggagcccgcgtgcgtcgctcccc
gcatctgacaacgaatatggtaaagctgtaaccgatggggctggaagctgggggcaccgt
ccccagaaccatttcctcccggcgcctcggcggcccaaaagtatcccggaggtatctgca
agcggcccgcaagcagcccgcggccggccctgcccaagggccaggcccctcgggtccggc
cagggatgctggcctcggggcgggaggcgcaggtccgccgtcgcgcgcggcctttcctcg
gaagcctccgccgccccgcgctcctcgcgccccgcgaaggtacctcaggtcccctgtcct
aggcccagcgcgctccagccgggcggccggtcaacgcccctcaggccacagccctccact
tccgcgtcccgcccaccggaagtgacgacccggaagctcccgctcctctcacggggggcg
gggaaaagaagatggcggcacccagcagccggtgaggagagaggacgcggggaccccggg
gggccgccggactcgtgcgtgatggccgcatccccgcatactctctcttcgcgtgtcatg
acaggctgggtaggaggatgtgtctggtatctagaaaggagagccttgcaggagtcacct
cgtaggttcctgcatcttctcaggaacgtcaatcaacagtgggttacatttcagcacttt
aacttcctcaggcacatgtatgtcacacaactgaacagaagcttcaaccagcaaatgaaa
ccaaagccggaaccagtggcatctcctttccttgaaaaagcatctttggatgaggccaaa
gccgaaatatacgagatgagacctctttcacccccaagcctgtctctgtcgagaaagcca
aatgaaaaagaatcgatagaactcgaacccaccccagtaattgaaggctctatagctgtg
ggaacagagacaaaagaagaaaagcagtggaaagagatgaagctgcgtgtggatgacttg
ccaggaattttggctcggctgtccaaaatcaaactcacagcccttgtggtcagcaccacc
tcagccggatttgccttggccccagcaccttttgactggccctgcttcttgctgactttt
gtcggaactggcctggcttcctgtgctgccaactccatcaatcaggtcagtttttttgag
gttccatttgattcaaacatgaataggacaaagaacagacctctggttcgtggacagatc
agcccgttgctagctgtgtcctttgccacttgctgtgcagttccgggagttgcccttctg
acctggggcgtaaacccactcacgggagctctggggctcttcaacattttcctgtacacc
tgctgctacaccccgctcaagaggatcagcattgccaacacgtgggtgggagccgtcgtg
ggggccatccctcccctcatgggctggaccgcggccacgggcagcctggatgctggagcg
tgtcttttgggaggaatcctctactcctggcagtttcctcatttcaacgcgctgagctgg
ggcctccgcgaagactactcccggggcggctactgcatgatgtcggtcacccacccggac
ctgtgccggcgcgtcgccctgcgccactgcctggccttggtcgcaatgtccgccgcggcc
ccagccctggacgtcaccacgtggaccttccccgtcatcgccctccccatcaacctgtac
atttcctacctcagctttcggttctacagggacgcagaccggaagagctcccggaagctg
ttcttctgcagcctctggcatctgccccttttcctgctgctgatgctgacctgcaagagg
ccggctgcgcagggcgacgcgggcgggccgcagagttga
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