Phocoena sinus (vaquita): 116745224
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Entry
116745224 CDS
T07759
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00260
Glycine, serine and threonine metabolism
psiu00630
Glyoxylate and dicarboxylate metabolism
psiu00670
One carbon pool by folate
psiu01100
Metabolic pathways
psiu01200
Carbon metabolism
psiu01230
Biosynthesis of amino acids
psiu01240
Biosynthesis of cofactors
psiu01523
Antifolate resistance
psiu04981
Folate transport and metabolism
Module
psiu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116745224 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116745224 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116745224 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116745224 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
116745224 (SHMT1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116745224 (SHMT1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
116745224
NCBI-ProteinID:
XP_032471667
Ensembl:
ENSPSNG00000013645
UniProt:
A0A8C9CAW9
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Position
20:complement(1201972..1227496)
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AA seq
484 aa
AA seq
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MATPVNGAPVDANLWSSHEKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRA
VLEALGSCLTNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDPQGWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTNKKKISATSIFFESMPYKVNPDTGY
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLREIADDNGAYLMADMAHISGLVAAGV
VPSPFEHCHVVSTTTHKTLRGCRAGMIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFRLYQRQVLANCRALAETLMGLGYKVVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQK
VAHFIHRGIELTLQIQDTVGAKATLKEFTEKLAGAEDHQRAVAALRAEVESFAALFPLPG
LPDF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccgtcaacggagcccccgtggatgccaacttgtggtcctcgcatgagaag
atgctggcgcagcccctgaaagatagcgacgtggaggtttacaacatcattaagaaggag
agtaaccggcagagggtcggcctggagctgatcgcctccgagaactttgccagccgggct
gttctggaggccctgggttcttgcctaaccaacaagtactccgaggggtacccgggccaa
aggtactacggcgggacggaattcatcgatgagctggaggtcctctgtcagaagcgagcg
ctgcaggtctatggcctggacccccagggctggggagtcaatgtccaaccctactcaggc
tcccccgcaaacttcgcggtgtacacagccctggtggagccccacggccgcatcatgggc
ctggacctgcccgacgggggccacctgacccatgggttcatgaccaacaagaagaagatc
tccgctacgtccatctttttcgaatctatgccctacaaggtgaaccccgacaccggctac
atcaactacgaccagctggaggagaatgcccgcctcttccacccgaagctcatcatcgca
gggaccagctgctactcccggaacctggactacgcccggctgcgtgagatcgctgacgac
aacggggcgtatctcatggccgacatggcacacatcagtgggctggtggcagccggcgtg
gtgccctcccccttcgagcactgccacgtggtgtccaccaccacccacaagaccctgcgg
ggctgccgcgccggcatgatcttctacaggaagggagtgcgcagcgtggacccgaagacg
ggcagagagactcgctacaacctggagtcactcatcaactctgccgtgttcccaggcctg
caagggggcccccacaaccacgccattgctggggtggcggtggctctgaagcaggccatg
actccggagttcagactctaccagcgccaggtgctggccaactgcagggctctggccgag
accttgatggggctgggctacaaagtggtcacaggtggttctgacaaccacttgatcctc
gtggacctccgctccaaaggcacagacggcggccgggctgagaaggtgctggaagcctgt
tccatcgcctgcaacaagaacacctgcccaggtgacaaaagcgccctgcggcccagcgga
ctgcgcctggggaccccggcgctgacatcccgaggactcttggaagaagatttccaaaaa
gttgcccattttattcacagagggatagagctgaccctgcagatccaggacacggtgggg
gcgaaggctaccctgaaggagttcacggagaagctggcaggggctgaggatcaccagcgg
gctgtggcggcactcagggcggaggtggagagctttgccgccctcttccctctgcccggc
ctgcccgacttctag
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