Phocoena sinus (vaquita): 116745233
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Entry
116745233 CDS
T07759
Name
(RefSeq) keratin, type I cytoskeletal 12-like isoform X1
KO
K07604
type I keratin, acidic
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04382
Cornified envelope formation
psiu04915
Estrogen signaling pathway
psiu05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
116745233
09158 Development and regeneration
04382 Cornified envelope formation
116745233
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
116745233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116745233
04147 Exosome [BR:
psiu04147
]
116745233
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
116745233
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116745233
Exosomal proteins of other body fluids (saliva and urine)
116745233
Exosomal proteins of colorectal cancer cells
116745233
Exosomal proteins of melanoma cells
116745233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
T2SSM
UPF0242
Motif
Other DBs
NCBI-GeneID:
116745233
NCBI-ProteinID:
XP_032471683
Ensembl:
ENSPSNG00000011850
LinkDB
All DBs
Position
20:complement(38653234..38664363)
Genome browser
AA seq
497 aa
AA seq
DB search
MRAWSPYRTIQKIALSLTGPGLLLTWLSSQSGTLGRARGISASSIGSSYGGSAFGFGGSY
GGGFSAASMFASSSGFGGGSGSSFAGGLGAGYGGARGGGFGSLGIGFGGSPGGGSLGILS
GNDGGLLSGSEKETMQNLNDRLASYLDKVRALEEANADLENKIREWYEIRGSGDPPNDYS
KYHLLIEDLRNKIISDSTANAQLLLQIDNARLAAEDFRMKYENELALCQNVEADINGLRK
VLDEMTLARADLETQIETLNEELAYRKKNHEEELQSFRAGGPGQVSVEMDAAPGVDLTSL
LNDMRGQYEAIAQQNREDAEAWFVEKSAELRKEISSNTEELQSSKSVVTDLRRVLQTLEI
ELQSQLATKKSLDDSLAETEGDYCSQLSQVQQLIGNVEEQLRQVRCDAEHQSADYQLLLN
IKAHLELEIETYRRLLDGEAQGDCLDESSSVTASNSQAPSTDSSKDPTRARKIKTIVQEV
VNGEVVSSQVQEIEEII
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgtggtccccctaccgaacaatacaaaaaattgcactgagtctaaccggacca
ggattgctccttacttggctgtcctcccaaagtgggacactgggcagagccaggggcatt
tctgcctcaagcattggaagcagctacgggggaagtgccttcggctttggaggcagctat
gggggaggcttttcagctgcttccatgtttgcttctagttctggctttggtggtggctct
ggaagctcctttgcgggaggactgggcgctggttatggaggagccaggggaggtggcttt
gggagcctggggattgggtttgggggaagcccaggagggggctctctagggattctctct
ggcaacgatggaggccttctttctggatcagaaaaggaaactatgcaaaatcttaatgac
agattggcttcctacctggataaggttcgagctctagaagaggctaacgctgacctagaa
aacaaaattcgagaatggtacgaaatacgaggatctggagacccaccgaatgattatagt
aaatatcatctgttgattgaagacctcaggaataagatcatttctgacagcaccgcaaac
gcacagctgctcttgcagatcgacaatgcgagactggctgccgaagacttcagaatgaaa
tacgaaaatgagctggccctgtgccagaacgtggaggccgacatcaacggcttgcgcaag
gtgctggacgagatgaccctggccagagccgacctggagacgcagatcgagaccctgaat
gaggagctggcctaccggaagaagaatcacgaagaggagctccaaagcttccgggccggc
ggcccaggccaggtcagcgtagaaatggacgctgcccccggagtggacctcacgagcctc
cttaacgacatgcgggggcagtatgaagccatagcccagcagaatcgggaggatgcggaa
gcctggttcgttgaaaagagcgccgagctcaggaaggagatcagcagcaacaccgaggag
cttcagtccagcaagagcgtggtcaccgacctgcggcgcgtgcttcaaaccctggagatc
gagctccagtcccagctcgccacgaagaaatccctggacgactcgctggccgaaaccgag
ggcgactactgcagccagctgtcccaggtgcagcagctcatcggcaacgtggaggagcag
ctgcggcaagtgcgctgcgacgccgagcaccagagcgccgactaccagctgttgctgaac
atcaaggcccatctggagctggagatcgagacctaccgccgcctgctggacggagaagcc
caaggtgactgtttggatgaaagttcctctgtgacagcctccaactctcaagccccgtca
actgattcctccaaagaccctaccagagcccgaaaaatcaagacaattgtgcaggaagtg
gtgaatggtgaggtggtctcctcccaagttcaggaaatcgaagaaataatataa
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