Phocoena sinus (vaquita): 116745345
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Entry
116745345 CDS
T07759
Symbol
CHRNB1
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116745345 (CHRNB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116745345 (CHRNB1)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116745345 (CHRNB1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
T7-like_gp67
Motif
Other DBs
NCBI-GeneID:
116745345
NCBI-ProteinID:
XP_032471890
Ensembl:
ENSPSNG00000011840
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Position
20:complement(8924577..8932825)
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AA seq
506 aa
AA seq
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MTPGALLLLLLLGALGAPFAPGARGSEAEGRLREKLFSGYDSSVRPAREVGDRVGVSIGL
SLAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPEEHEGIDSLRITAESVWLPDVVLLNN
NDGNFDVALDISVVVSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSE
VSLQTGLGPDGQERQEVHIHEGTFIENGQWEIIHKPSRLIQPPVDPRGGGERRREEVTFY
LIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKV
PETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHKLPPYL
GLKRPKPERDQIPEPPPIPLRDSPGSGWGRGTDEYFIRKPPNDFLFPKPNRFQSELSAPD
LRRFTDGPNRAVGLPPELREVVSSISYIAQQLQEQEDHDALKEDWQFVAMVVDRLFLWTF
IIFTSVGTLVIFLDATYHLPPPDPFP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaggggcgctgctgctgctgctgctgctgggggcgttgggggcgccattcgcc
ccgggcgcccgcggctcagaggcggagggccgactccgcgagaaacttttctcgggctat
gatagctcggtgaggccggcgcgggaggtgggagaccgcgtcggggtcagcattggtctc
agcctagcgcaattaatcagcctgaacgagaaggatgaggagatgagcacaaaggtctac
ttagacctggagtggactgactacaggctgagctgggaccctgaggagcacgagggcatc
gattcactccgcatcactgccgaatccgtgtggctaccagacgtggtgctcctaaacaac
aacgacggaaattttgatgttgctctggacatcagcgtcgtggtgtcctccgacggctcc
gtgcgctggcagcccccgggcatctatcgcagcagctgcagcatccaggtcacctacttc
ccctttgactggcagaactgcaccatggtgttcagttcctatagctatgacagctcagaa
gtcagtctgcagaccggcttgggtcccgatgggcaggagcggcaggaagtgcacattcat
gaaggcacttttattgagaatggtcaatgggagattattcacaagccttctcggctaatc
cagcctccagtggatcctaggggaggaggggaaagacggcgtgaagaagtcaccttctac
ctcatcattcgccggaagcctctcttttacctggttaacgtcattgccccatgcatcctc
atcactcttctggccatcttcgtcttctacctgccaccagatgcaggagagaagatgggg
ctctcgatctttgccctgctgacccttactgtgttcctgctgctgctggcagacaaagtg
cctgagacctccctgtctgtccccatcattatcaaatacctcatgtttaccatggtcctc
gtcaccttctcagtcatccttagcgtcgtagtcctcaacctgcaccatcgctcaccccac
acccaccaaatgcccctttgggtccgtcagatctttatccacaaactccctccgtatctg
ggtctgaagagacccaaacctgagagagaccagataccggagccacctcctatacctctc
agggattctccaggaagtggctggggtcggggaacagatgaatatttcatccgcaagcca
ccaaatgattttctcttccccaaacccaacaggttccagtctgaactgtctgccccggac
ctgcggcgatttaccgatggtccaaaccgggctgtgggcctgcctcccgagctacgggag
gtcgtttcctcaatcagctacatcgctcaacagctgcaggaacaggaggaccacgacgcg
ctgaaggaggactggcagtttgtggccatggtggtggaccgcctcttcctgtggaccttc
atcatcttcacgagcgtcgggaccctcgtcatctttctggacgccacgtaccacttgccc
cctcccgacccctttccttga
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