Phocoena sinus (vaquita): 116745376
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Entry
116745376 CDS
T07759
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116745376 (TMC6)
03037 Cilium and associated proteins [BR:
psiu03037
]
116745376 (TMC6)
Transporters [BR:
psiu02000
]
Other transporters
Pores ion channels [TC:
1
]
116745376 (TMC6)
Cilium and associated proteins [BR:
psiu03037
]
Other cilia and associated proteins
Stereociliary proteins
116745376 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
EutK_C
Motif
Other DBs
NCBI-GeneID:
116745376
NCBI-ProteinID:
XP_032471964
Ensembl:
ENSPSNG00000021896
LinkDB
All DBs
Position
20:49717263..49734441
Genome browser
AA seq
816 aa
AA seq
DB search
MSRSLAFVLNVPETPQDPEDSQEPSPYDESEVHDSFHQLIQEQSRWVAEEGLELQHRALG
AGALGASGSDHQALLGPEGAPVYSTATLHILASMPSRTIAASTGRSRGAIISQYYSRTVR
LRRRAGRPQLRDVGRSARPSLRLYDLELDPAVLEEDEKQGLLVKELQGLTVAQRDHILRG
MPLSLAEKRCLREESRPPRGKRRAQGRHGLLSCCSRLRDSCILASHNLGLALLSGLQALM
PWHYALKRIGGQFGSSVLSYFLFLKTLLAFNTLLLLPLLAFIVAVQAAFPPAPSGSAPAF
RGLELLTGGGCFTHTVMYYGYYSNATLNQPCASPLDGCQCTPEAGGLPYNMPLAYLFTVG
VAFFITCITLVYSMSRSFGESYRVGSTSGVHAITVFCSWDYKVTQKWASRLQHDNIRTQL
KELLAEGQLRQRPRRACGRLQQAAVLGLVWLLCLGTTLVCALAVYTFSELVIQQSRVSAE
RDGALLALPLVVCLLNLGAPYLFRVLAVLERHDSPVLEVYVAICRNLILKVVILGILCYH
WLGRRVGTLKDQCWEDFVGQELYRLMVMDFIFTLLDTLLGELVWRLISEKRSQENGKPEF
DIAGNVLELIYGQTLTWLGVLFSPLLPAMQIIKLLFLFYVKKTSLMANCQAPRRPWKASH
MSTVFISLLCFPSFLGAAVFVCYAIWQVKPSNICGPFRTLDTMYEAGKVWVRHLEEAGPG
VSWLPWIHRYLVESAFPIYLASALLLAVIYFNIQVVKGQRKVICLLKEQLSNEGEDKIFL
INKLQRIYERKERSRVGRTEEAVMPPAVFTDDWDAQ
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtcgctggcttttgtcctcaatgtccctgagaccccacaggacccagaggac
agccaggagcccagcccctacgatgagagcgaagtgcacgactccttccaccagctcatc
caggagcagagccgctgggtggccgaggaggggctggagctgcagcacagggcgctgggg
gctggagccctgggggcctcaggcagtgaccaccaggccttgctggggcccgagggcgcc
cctgtctacagcacggccacactccacatcttggccagcatgcccagtcgcaccattgcg
gcctccacaggccggagccgcggcgccatcatctcccagtactacagccgtacggtgagg
ctgcgccgcagggccggccggcctcagctcagagatgtgggccgctcagcccggcccagc
ctccgcctgtacgacctggagctggaccccgcggtcctggaggaggatgagaagcagggc
ctcctggtgaaggagcttcagggcctgacggtggcccagcgggaccacatactccggggg
atgccgctgagcctggccgagaaacgctgcctgcgagaggagagccggcccccgaggggc
aagcggagggcccaggggcgccatgggctcctctcctgctgcagccggctgcgtgacagc
tgtatcctggcgtcgcacaacctggggctcgcgctgctctcggggctgcaggccctgatg
ccctggcattatgccctgaagcggatcgggggccagttcggctccagcgttctctcctac
ttcctcttcctcaagaccctgctggccttcaacacgctgctgctgctgccactgctggcc
tttatcgtggccgtgcaggcagccttcccgcctgcgccctcgggctccgcgcccgccttc
aggggcctggagcttctcacgggcgggggctgcttcacccacaccgtcatgtactatggc
tactatagtaacgcgacgctgaaccagccgtgtgcctccccactggatggctgccagtgc
acgcctgaggcgggcggcctgccctacaacatgcccctggcctacctcttcaccgtgggg
gtagctttctttatcacctgcatcactctggtgtacagcatgtcccgctcttttggggag
agctaccgggtaggcagcacttcgggggtccatgccatcactgttttctgttcctgggac
tacaaagtgactcagaaatgggccagccgcctccagcacgacaacatccgaacccagctg
aaggagctgctggccgaggggcagctgaggcagcgcccccggagggcgtgcggacggctg
caacaggcggccgtgctggggctcgtttggctgctgtgtttggggaccacgctggtgtgc
gccctggccgtctacaccttctcagagctcgtgatccagcagagccgcgtgtctgctgag
cgggacggggcgctgctggccctgcccctggtggtctgccttctcaacttgggggccccc
tacctgttccgcgtcctggccgtcctggagcggcacgactccccggtgctggaggtgtac
gtggccatctgcaggaacctcatcctcaaggtggtcatcctggggattctttgctaccac
tggctgggccgcagggtgggcaccctgaaggaccagtgttgggaggactttgtgggccag
gagctgtaccggctcatggtgatggacttcatcttcacgctgctggacacgcttctgggg
gagctggtgtggaggctcatctctgagaagaggtctcaggagaacgggaagcctgagttc
gacattgcggggaatgttctggagctgatttacgggcagaccctgacctggctgggggtc
ctcttctccccgctgctccccgccatgcagatcatcaagctgctgttcctcttctacgtc
aagaagaccagcctgatggccaactgccaggcgccccgcaggccctggaaggcctcccac
atgagcaccgtcttcatctcgctgctctgcttcccctcctttctgggcgctgccgtcttc
gtctgctacgccatctggcaggtgaagccctcgaacatctgcggccccttccggaccctg
gacaccatgtatgaggcaggcaaggtgtgggtgcgccacctggaggaggcgggccccggg
gtctcctggctgccctggatccaccggtacctggtggaaagtgccttccccatctacttg
gcatcggctctgctgctggccgtgatctacttcaacatccaggtggtgaagggccagcgg
aaagtcatctgcctcctcaaggagcagctaagcaatgagggggaagacaaaatcttctta
atcaacaagcttcagcgtatctatgagaggaaggagaggagcagggttggtaggaccgag
gaggccgtgatgcccccagccgtattcacagacgactgggatgcccagtag
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