Phocoena sinus (vaquita): 116745439
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Entry
116745439 CDS
T07759
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01522
Endocrine resistance
psiu04350
TGF-beta signaling pathway
psiu04919
Thyroid hormone signaling pathway
psiu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116745439 (NCOR1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116745439 (NCOR1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116745439 (NCOR1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
116745439 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116745439 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116745439 (NCOR1)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116745439 (NCOR1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
116745439 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116745439
NCBI-ProteinID:
XP_032472061
Ensembl:
ENSPSNG00000013765
LinkDB
All DBs
Position
20:complement(2294404..2439192)
Genome browser
AA seq
2512 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQASQLLQQQ
QQQQLRRRPSLLSEFHPGSDRPQERRTGYEQFHPGPSPADHDSLESKRPRLEQVSDSHFQ
RVSAAVLPLVHTLPEGVRSSADAKKDPAFGVKHEAPSSPISGQPCGDDQNASPSKLSKEE
LIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTGVPARRMMKNQVMRKKLIL
FFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRK
QREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAE
QRRVKFINMNGLMEDPMKIYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSV
PDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKEEDKAEKTEKKEE
EKKDEEEKDEKEDSKENTKEKDKTESTAEETEEREQATPRGRKTANSQGRRKGRVTRSMT
SEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAI
AKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKASRKPREERDVSQCESVASTVSAQE
DEDIEAYNEEENPEDSEGAENSSGTESAPSPSPVEAVKPGEDSTENAPPRGTTPDPVPRA
SPSPAVPSTEAAEDASVETQANDSVAVDTAEPMDVGHRECGAEGTSALDLPSATKADAAD
VEMPESSPSRVEGDPKDRDLERGSEKPEPGGDDLGVAQQMSAPRPELPSDHDSSATCSAD
EDVDGEPERQRMFPMDSKPSLLNPTGSILVSSPIKPNPLDLPQLQHRAAVIPPMVSCTPC
NIPIGTPVSGFALYQRHIKAMHESALLEEQRQRQEQMDLERRGSASPRGAPKSPNREWEG
KSVAYMPYAEVTRALAQEAQMPSTAARSASPCRLSPREVSKAAPQPDVSAARCSVPPVLQ
PAPHQVITNLPEGVRLPTTRPTRPPPPLIPSSKTTVASEKPSFILGGSISQGTPGTYLPS
PNQASYAPEAAKPSAGSISLGLPRQQEAAKPATVPYIKQEEFSPRSQNSQPEGLLVRAQH
EGVVRGTTGAIQEGSITRGTPSSKLSVESIPSLRGSITQGTPALSQAGIPTEALVKGPIS
RLSIEESSPEKGREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPRTAHEISLKRSYE
SVEGALKQGLSMRESPVSAPLEGLICRALPRGSPHSDLKERTVLSGSIMQGTPRATTESF
EDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPRQDVLTQESQKTP
EVVQSTRPMVEGSISQGTPVKSDSSSGQSAIKHNVKSLVAGPSRLPRGLPPLEIRPENIK
AVERGKYEDVKAGEPVRSRHTSVVSSGPSVLRSTLHEAPKAQLSPGIYEDASARRTPGSY
ASTAPRGSPMMSRAPDVTISSSKSTSHERKSTLTPTQRESITAKSPVPGVDPAVSHSPFE
PHHRGGAPGEVYRSHLPTHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYAMEN
TRQTILNDYITSQQMQVGLRPDVARGLSPREQQLGLPYPATRGIIDLTNMPPAILVPHPG
GTSTPPMDRITYIPGTQVTFPPRPYNSASMSPGHSTHLAAAANAEREREREKEREHLTAA
PSDLCLRPGSEQPGRPSSHGYVRSPSPSVRAQETLLQQRPSVFQGTNGTSVITPLDPSAQ
LRIMPLPAGGPSISQGLPASRYSTAADALAALVDAAASAPQMDVSKTKESKHEAARLEEN
LRSRSAAVSEQQLEQKSLEAEKRPGQCLYTSSALPSGKPQPHSAVVYSEAGKEKGPPPKS
RYEEELRTRGKTTITAANFIDVIITRQIASDKDARDRGSQSSDSSGSLSSHRYETPGDAI
EVISPASSPAPPPERLQAYQPEVVKASQAENEACRQYEGPLHHYRPQPESPSPQPPPPPS
SQAEGVGQVPRTHRLITLADHICQIITQDFARNQVPSQPPQQPPTSTFQNSPSALVSTPV
RTKTSNRYSPESQSQSLHHQRPGSRVSPENLVDKSRGSIRPGKSPERSHVSSEPYEPISP
PQVAVVHEKQDSVLLLAQRGAEPAEQRNDSRSPGSISYLPSFFTKLENTSPMVKSKKQEI
FRKLNSSGGGDSDMAAAQPGTEIFNLPAVTTSGSVSSRGHSFADPASNLGLEDIIRKALM
GSFEDKVEDHGVAMPQPLGGVPGGAGTSVATGGEARREEGDPSPHSGGVCKPKLISKSNS
RKSKSPIPGQGYLGAERPSSASSVHSEGDYHRQTPGWAWEDRPSSTGSTQFPYNPLTMRM
LSSTPPAPVACAPVACAPASASPAAPHQPSRIWDREPAPLLSAQYETLSDSD
NT seq
7539 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggttatcctcccaaccaaggagcattcagcacagagcaaagtcgttat
cctccccactctgttcagtacacctttcccagcacccgtcaccagcaggagtttgcagtc
cctgattatcgttcttctcatctcgaagtcagtcaggcctcacagctcttgcagcaacag
cagcagcagcagcttcgcagacgaccttccctgctttcagagtttcacccaggttccgac
aggcctcaagaaaggagaactggatatgagcagtttcacccaggcccttccccggcggat
catgattcactggaatccaagcgaccacgtctggagcaggtttctgattcccatttccag
cgggtcagtgctgcggtcttacctttagtgcacacgctgccagaaggggtgaggtcttct
gcagatgctaagaaggatccagcatttggagtcaaacatgaagctccttcctctccaatc
tctgggcaaccatgtggagatgatcaaaatgcttcaccttcaaaactttcaaaggaagag
ttaatacagagtatggatcgtgtagatcgagaaattgcaaaagtagaacagcagatcctt
aaactgaaaaagaaacaacaacagctcgaagaagaagctgctaaacctccagagcctgag
aagcctgtgtcacctcctcccgtggagcagaaacaccgcagtattgtccagattatttac
gatgaaaatcggaaaaaagcagaagaagctcataaaatatttgaaggtcttggcccaaaa
gttgaactgccactctataaccagccatcagataccaaagtgtatcatgagaacatcaag
actggagtacctgcaaggcgcatgatgaaaaaccaggtgatgaggaaaaaactcatttta
ttttttaaaagaagaaatcatgcaagaaaacaaagggagcaaaaaatctgccaacgttat
gatcagctcatggaggcatgggagaaaaaagtggacagaatagaaaataatcctcggagg
aaagctaaagaaagcaaaacaagggagtattatgaaaagcagtttccagaaattcgaaaa
caaagagaacagcaagaacggtttcagcgagttgggcagaggggagctggtctttcagcc
accattgctaggagtgaacatgagatttctgaaattatcgatgggctctctgaacaggag
aataatgagaaacaaatgcgacagctctctgtgatcccacctatgatgtttgatgcagaa
cagagaagggtcaagttcattaacatgaatgggcttatggaggaccctatgaagatttat
aaagataggcagttcatgaatgtttggactgaccatgagaaggagatctttaaggacaag
tttatccagcatccaaaaaactttggactaattgcatcttacttggaaaggaagagtgtt
cctgattgtgttttatattactacttaaccaagaaaaatgagaattataaagccctagta
agaaggaactatggaaaacgcagaggaagaaatcagcagcaaattgcccgaccctcacaa
gaagaaaaagtagaagaaaaagaagaagataaagcagaaaaaacagaaaaaaaagaggag
gaaaagaaagatgaagaagaaaaagatgaaaaggaggactctaaagaaaacaccaaggaa
aaggataagacagaaagtacagcagaagaaactgaggagagagaacaggccacgccccgg
ggccgaaagactgccaacagtcagggccgccgaaagggccgggtcaccaggtccatgacc
agtgaggccgcagctgccagcgctgcagctgctgcagccaccgaggagccccccccacct
ctgccaccgccgccagaacccatttctacagaacctgtagaaacctctcgatggacagaa
gaagaaatggaagttgctaaaaaaggtctagtagaacatggtcgtaactgggcagcaatt
gccaaaatggtgggaactaaaagtgaagcccaatgtaaaaacttctattttaactataag
agacgacacaatcttgacaacctcttgcagcagcataaacagaaagcctcacggaagcct
cgtgaagagcgagatgtgtctcagtgtgaaagtgtagcttccaccgtttctgctcaggag
gacgaggacatcgaagcctacaacgaagaggaaaatcccgaggacagtgaaggtgctgaa
aatagttctggtacagaaagtgctccttctccttcaccagttgaagctgtcaagcccggc
gaagacagcactgaaaacgcgcctcctcgggggaccacgcccgaccccgtgcccagggcc
tctccgtcgccggcagttccgagcacagaagcagccgaggatgccagtgtggagacccag
gcgaacgacagcgtggcagtggacacagcagagccgatggacgtggggcacagggagtgc
ggggctgaaggcacttctgctctggacctcccctcggccaccaaggctgacgctgcggac
gtggaaatgccagaaagcagtccatccagagtcgaaggggaccccaaagacagagacctg
gagagaggcagcgagaagccggagcctggaggcgacgacctaggggtggcccagcagatg
agcgccccgaggcccgagctcccctctgaccacgactccagtgccacgtgcagtgccgac
gaggatgtggacggggaacccgagaggcagcgaatgtttcctatggattcaaaaccttca
ttgttaaaccccactggatctatactggtctcgtccccaataaaaccaaatccactggac
ctgccacagcttcagcatcgagctgctgtcatcccgccaatggtttcctgcaccccatgt
aacataccgattggaactccagtgagcggcttcgccctctaccagcgacacatcaaagcc
atgcatgagtcagcgcttctggaggagcagcggcagaggcaggagcagatggacctggag
cgcaggggttctgcgagcccgcgtggcgcccccaagagcccaaacagagagtgggaagga
aaatcagtcgcctatatgccttatgctgaggtcacacgtgctctagcacaggaagcacag
atgcccagtaccgcagcaaggtcagcatcaccgtgtaggctctctccgagagaagtcagt
aaagctgcgccacagcccgatgtgagtgcagcccgctgtagtgtcccgccagtcctccag
cctgctcctcatcaagtgataactaacctccctgaaggggttcggcttccaacaactcga
cccactaggccacctcctcctctcatcccatcatccaaaaccacagtggcttcagaaaaa
ccatcttttatactgggaggctccatctcacagggaacacccggcacttacttgccttct
cctaatcaggcctcctatgctcccgaggcagcgaagccctcggcgggctccatctccctg
ggactgccgcggcagcaggaggccgccaagccagctactgtgccctacatcaagcaagaa
gagttttctccccgaagccaaaactcacaacctgagggtttattggtcagagcccaacat
gaaggagtggtcagaggtaccacaggagccattcaagaaggaagtataactcggggaact
ccctccagcaaactttctgtggagagcatcccatccctccggggctctatcacccagggg
accccggctctgtcccaggctggcataccaactgaggctttggtgaagggacccatttct
agactgtccattgaagagagcagtcctgagaaaggccgagaggaagctgcatccaaaggc
catgttatttatgaaggcaaaagtggacacatcttatcttacgataatattaagaatgcc
cgagaagggacgaggagtccgagaacagctcatgaaatcagtctcaaaagaagctatgaa
tcagtggaaggagctctaaagcaagggttgtccatgagggagtctcctgtgtcagcaccg
ctggaggggctgatctgccgagcattacccagggggagccctcactctgacctcaaagaa
aggactgtgctgtctggttccataatgcagggcacaccaagagcaacaactgaaagtttt
gaagatggccttaagtaccccaaacagattaaaagggagagtccgcccatacgagcgttt
gaaggtgccattaccaaaggaaaaccttacgatggcatcaccaccatcaaagagatgggg
cgctccatccatgagatcccacggcaagatgttttaactcaggaaagccagaaaacccca
gaagtggtacagagcacgaggcccatggttgagggctccatctcccagggcacacccgtc
aagtctgacagcagttcaggccaatccgccatcaagcacaacgtcaagtccttggtcgcg
gggcctagcagactgccccgtgggctgcctccactggaaattaggccagagaacataaaa
gcggtcgaacggggaaaatacgaggacgtgaaagcaggcgagcctgtgcgttcccggcac
acgtcggtggtaagctctggcccctcggttctcaggtcaacgcttcacgaagcccccaaa
gcacagctgagcccggggatttacgaggacgccagcgcacggcggacgccggggagttac
gccagcactgcgcccagaggctcgcccatgatgagcagagctcccgatgttacgatttct
tctagcaagtctaccagtcatgaaaggaaatcgacactgacccctacccagagggaaagc
atcacagcgaagtctccagttcctggggtagaccctgcagtgagccacagcccttttgag
ccgcaccacaggggcggtgccccaggggaggtttaccggagccatctgcccacacatctg
gacccagccatgccgtttcaccgggctctggatcctgcagctgccgcttacctgttccag
agacagctgtcaccaactccaggttaccccagtcagtatcagctctatgcgatggagaac
acgcggcagacgatcctcaacgactacatcacctcacagcagatgcaagtgggcctgcgc
ccggacgtggcccgagggctgtccccccgggagcagcagctgggtcttccgtacccagca
accaggggaatcattgacctgaccaatatgcccccagcaattttagtgcctcatccaggg
ggaacaagcactccccccatggacagaatcacttacattcctggaacacaggtcaccttc
cctccgcggccgtacaactctgcgtccatgtctccaggacactcaacacacctcgcggct
gcggcaaatgctgaaagagagcgggagcgggagaaggagcgggagcacctcaccgcagcc
ccctcggacctctgcctgcggccaggctcagaacagcccggccggcccagcagccacggc
tatgttcgctccccgtctccttcagtcagagctcaggagaccctgctgcagcagagaccc
agcgttttccagggaaccaacggaaccagcgtgatcacacctttggacccgagcgcacag
ctacggatcatgccgctgcctgctgggggcccttccatcagccagggcctgccggcctcc
cgttacagtactgctgcggacgccctggctgctcttgtggacgccgcagcgtctgctccc
cagatggacgtgtccaaaacaaaagagagtaagcatgaagctgccaggttagaagaaaat
ttgaggagcaggtcagcagcagttagtgagcagcagctagagcagaaaagcctggaggcg
gagaagagacccggtcagtgtctgtacacttcttcagccctgccgagtggcaagccccag
cctcattctgcagtagtttactctgaggctgggaaagagaaagggcctcctccaaaatcc
agatatgaggaagagctaaggacccgagggaagactaccattaccgcagctaacttcata
gacgtgatcatcacccggcaaattgcctcggacaaggatgcaagggaccgtggctcccag
agttcagactcttccggtagcttatcttctcaccggtatgaaacacctggcgatgccatt
gaggtgataagccctgccagctcccctgcgccgccccccgagaggttgcaggcctaccag
ccggaggtcgtgaaggcgagccaggcagaaaacgaagcctgcaggcagtacgaaggaccg
ctgcaccactatcggccgcagccggagtcgccctccccacagccgccgccgcccccatct
tcacaggccgagggggtggggcaggtacccaggacacaccgactcatcacacttgctgat
cacatctgtcaaattatcacgcaagattttgctagaaatcaagttccgtcacagcctccc
cagcagcctcccacttctacattccaaaattcaccgtctgctttggtgtctacacccgtg
aggactaaaacatcaaaccgttatagcccagaatcccagtctcagtctcttcaccatcaa
agaccaggttcaagggtctctccagaaaatcttgtggacaaatccaggggaagtatcagg
cctggaaagtccccagagaggagtcacgtctctagcgagccctacgagcccatctcccca
ccccaggttgcggtcgtgcacgagaaacaggacagcgtgctgctcctggcccagcgcgga
gccgagcccgcagagcagaggaatgattcccgatcaccagggagtataagctacttgcct
tcattcttcaccaagctggaaaacacctcacccatggttaaatcaaagaagcaggagatc
tttcgtaagttgaactcctctggtggaggtgactctgatatggcagctgctcagccagga
actgagatctttaacctgccagcagtcaccacctcaggctccgtgagctcccgaggtcat
tcctttgctgaccctgccagcaacctcgggctggaggacatcatccggaaggcgctcatg
gggagctttgaagacaaagtggaggaccacggggtcgccatgccccagcccctggggggg
gtgcccggtggtgccggcacctcggtggcaaccggcggtgaggcccggagagaggaaggg
gacccgtcacctcattcaggaggagtttgcaaaccaaagctgatcagcaagtcaaacagc
aggaagtcgaaatctcctatcccggggcaaggctacttgggagctgagcggccctcctca
gcctcctctgtgcactcggaaggggactaccacaggcagacgccaggctgggcctgggag
gacaggccttcctccacaggctcgacgcagttcccctacaaccccctgaccatgcggatg
ctcagcagcacgccccctgcgcccgtcgcctgtgcgcccgtcgcctgtgcgcccgcctct
gccagccccgccgcccctcaccagccgagcaggatctgggatcgggagccggccccgctg
ctctccgcgcagtatgagacgctgtccgacagcgactga
DBGET
integrated database retrieval system
