Phocoena sinus (vaquita): 116745485
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Entry
116745485 CDS
T07759
Symbol
CDC27
Name
(RefSeq) cell division cycle protein 27 homolog isoform X1
KO
K03350
anaphase-promoting complex subunit 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04110
Cell cycle
psiu04114
Oocyte meiosis
psiu04120
Ubiquitin mediated proteolysis
psiu04914
Progesterone-mediated oocyte maturation
psiu05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116745485 (CDC27)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116745485 (CDC27)
04114 Oocyte meiosis
116745485 (CDC27)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
116745485 (CDC27)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
116745485 (CDC27)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116745485 (CDC27)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116745485 (CDC27)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116745485 (CDC27)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
116745485 (CDC27)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
116745485 (CDC27)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
116745485 (CDC27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ANAPC3
TPR_8
TPR_12
TPR_17
TPR_11
TPR_19
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_9
TPR_6
ARM_TT21_N
TPR_Slam
ChAPs
PPTA
ARM_TT21_C
ANAPC8
TPR_10
ARM_TT21_2nd
TPR_MalT
Csm6_6H
ARM_TT21_5th
TPR_20
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
116745485
NCBI-ProteinID:
XP_032472129
Ensembl:
ENSPSNG00000013235
LinkDB
All DBs
Position
20:complement(42785264..42844544)
Genome browser
AA seq
825 aa
AA seq
DB search
MTVLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRL
LKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSL
LGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKLTSLQNFSSCL
PNSCTTLVSNHSLSHRQPETVLTETPQDTIELNRLNLESSNSKYSLNTDSSVSYIDSAVI
SPDTVPLGTGTSILSKQVQNKPKTGRSLLGGPAALSPLTPSFGILPLETPSPGDGSYLQN
YTNTSSVIDVPSTGAPSKKSVARIGQTGTKSVFSQSGNSREVTPILVAQTQSSGPQTSTT
PQVLSPTITSPPNALPRRSSRLFTSDSSTTKENSKKLKMKFPPKIPNRKTKSKTNKGGIT
QPNINDSLEITKLDSAIISEGKISTITPQIQAFNLQKAAAEGLMSLLREMGKGYLALCSY
NCKEAINILSHLPSHHYNTGWVLCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIY
STTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPN
YAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQ
KALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKY
KSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQIKEAI
DKRYLPDDEEPITQEEQIMGTDESQESSMTDADDTQLHAAESDEF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgctgcaggaacctgtccaggctgctatatggcaagcgctaaaccactatgct
tacagagatgcagttttcctcgcagagcgactatatgcagaagtacactcagaagaagcc
ttgtttttactggcaacctgttattaccgctcaggaaaggcatataaagcatatagactc
ttgaaaggacacagttgtactacaccgcaatgtaaatacctgcttgcaaaatgttgtgtt
gatctcagcaagcttgcagaaggggaacagatcttatctggtggagtgtttaataagcag
aaaagccatgatgatattgttactgagtttggtgattcagcttgctttactctttcattg
ttgggacatgtatattgcaagacagatcggcttgccaaaggatcagaatgttaccaaaag
agccttagtttaaatcctttcctctggtccccctttgaatcattatgtgaaataggtgaa
aagccagatcctgaccaaacatttaaattaacatctttacagaactttagcagctgtctg
cccaactcttgcacaacactagtatctaatcatagtttatctcacagacagcctgagaca
gttcttacagaaacaccccaggacacaattgaattaaacagattgaatttagaatcttcc
aattcaaagtactcattgaatacagattcttcagtgtcttatattgattcagctgtaatt
tcaccagatactgtccctcttggaacaggaacttccatattatctaaacaagttcaaaat
aaaccaaaaactggtcgaagtttattaggaggaccagctgctcttagcccattaacccca
agttttgggattttgccattagaaaccccaagtcctggagatggatcctatttacaaaac
tacactaatacatcttctgtaattgacgtgccatcaaccggagccccttcaaaaaagtct
gttgccagaatcggccaaactggaacaaagtctgtcttctcacagagtggaaacagtcga
gaggtaactccaattcttgttgcacaaacacaaagttctggcccacaaacaagtacaaca
cctcaggtattgagccccactatcacatctcccccaaatgcactgcctcgaagaagttca
cgactttttactagtgacagctctacaaccaaggagaatagcaaaaaattaaaaatgaag
tttccgcctaaaatcccaaacagaaaaacaaagagtaaaactaataaaggaggaataact
caacctaacataaatgatagcctagaaataactaaattagactctgcaatcatttcagaa
gggaaaatctccacaatcacacctcagatccaggcatttaatctacagaaagcagcagca
gaaggtttgatgagccttcttcgtgaaatggggaaaggttatttagctttgtgctcatac
aactgcaaagaagctataaatatcttgagccacctaccttctcaccactacaatactggt
tgggtcctgtgccagattggaagggcctattttgaactttcagagtacatgcaagctgaa
agaatattctcagaggttagaagaattgagaattacagagtcgaaggcatggagatctac
tctacaacactttggcatcttcaaaaggatgttgctctttcagttctttcgaaagactta
acagatatggataaaaattcaccagaggcctggtgtgctgcagggaactgtttcagtttg
caacgggaacatgatattgcgattaaattcttccagagagctatccaggttgatccaaat
tatgcttatgcctatactctattagggcatgagtttgtgttaactgaagaattagacaaa
gcattagcttgttttcgaaatgctatcagagtcaatcctagacattataatgcatggtat
ggtttaggaatgatttattacaagcaagaaaaattcagccttgcagaaatgcatttccag
aaagcacttgacatcaaccctcaaagttcagttttgctttgccacattggagtagttcag
cacgcactgaaaaaatctgaaaaggctttggataccctaaacaaagccattgttattgat
cctaagaaccctctatgcaaatttcacagagcctcagttttatttgcaaatgaaaaatat
aagtctgctttacaagaacttgaagaattgaaacaaattgttcccaaagagtccctcgtt
tacttcttaataggaaaggtttacaagaagttaggtcaaacgcacctcgccctgatgaat
ttctcttgggctatggatttagatcctaaaggagccaataaccagattaaagaggcaatt
gataagcgctaccttccagatgatgaggagccaatcacccaagaggaacagatcatggga
acagatgaatcccaggagagcagcatgacagatgcggatgacacacaacttcatgcagct
gaaagtgatgaattttaa
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