Phocoena sinus (vaquita): 116745521
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Entry
116745521 CDS
T07759
Symbol
RNF135
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF135
KO
K16272
E3 ubiquitin-protein ligase RNF135 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116745521 (RNF135)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116745521 (RNF135)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116745521 (RNF135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-RING_10
TRAF3_RING
PRY
zf-RING_4
Sina_RING
NADH_4Fe-4S
Motif
Other DBs
NCBI-GeneID:
116745521
NCBI-ProteinID:
XP_032472175
LinkDB
All DBs
Position
20:17735503..17754579
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AA seq
536 aa
AA seq
DB search
MCFQSAESSKETVAPFCIVIAILKESSGGGFYKYSAGAPPQTMKSDSLGVEAEQHRGGGL
GTRAGLDACPAVPMXLAEDDLGCIVCHELLARPATLSCGHSFCHNCLMGLWGAGRHGSCP
TCREGAERKNTMLQDLEDKYSRKARELEGPNPAPGPPRRTAQLPVVAQKSLTEVGWGLAE
LVERLIDTVRSLQSQRHLPESEPDNEMSIPAVALSDGVDLSLASPKLVTSNTPEGKMRDX
LHDLEEIQEKLQENFMWKEALEEQIKGELILFGKGGLIMEVGAAFRGFVFWGQDLRAQLC
YPCGVNEEGVQIGENFTFTVHTLTFPLLSLILPNYGHCKHIVVLRPLSMNHQRWLVLFWF
FSPGVINPTFDLGSLSCSLEVSKDXTVSHRPQPYPWSHERFASCQALCSQALSSGQQYWE
VDTQQCSHWAVGVASRGMRRDQILGRTRDFWCVEWKGTSQLSAWDMVKKTVLGSNRPSVV
GIWLDLEEGKLAFYSVADQVTLLYECPVSVAFPLHPAXWLYGLFPGSSLTIRQINI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttcagtcagcagagagcagtaaggaaacagtggctcccttctgcattgtaata
gcgattttaaaagaatcatctgggggaggtttttacaaatactccgctggggctccaccc
cagacaatgaaatcagactctctgggagtggaggccgaacaacatcgcggcggcggtctg
gggaccagggcgggcctggacgcctgcccggccgtccccatgtgactggccgaggacgac
ctgggctgcatcgtctgtcacgagctgctggcccggcccgccacgctctcctgcggccac
agcttctgtcacaactgcctgatgggtctgtggggcgcagggcgccacgggtcctgcccc
acctgccgcgagggcgccgagcggaagaacacgatgcttcaggacctggaggacaagtac
agtcggaaggcgcgcgagctggagggcccgaacccagcgcccggacccccgcgccgcacc
gcgcagctgccggtggtggcgcagaagagcctcacagaagttggctgggggctcgcagag
ctggtggaacggcttatagatactgtcaggagccttcagagtcagagacatctcccagaa
tctgaaccagacaatgaaatgagcatcccggctgtggctttgtcagatggggtggacctt
tccttggcttctccaaaactagtgacttccaacacacctgaggggaaaatgagagacnat
ctccatgacctagaagagatccaagaaaaattacaagaaaacttcatgtggaaagaggcc
cttgaagaacaaattaagggtgagttgattttatttggtaaaggaggtttaattatggaa
gttggggcagcgttccgtggctttgttttttggggacaggatctgagagcccagctgtgt
tatccctgtggtgtgaatgaggaaggagtacaaataggggaaaatttcaccttcacagtc
catactctgacatttcccttactgtcccttattctacctaactatggtcattgcaagcac
atagtagttttaagacctcttagcatgaaccatcagaggtggctagtcctgttctggttt
ttttccccaggggtcatcaatccaacctttgacctagggagcctctcctgtagcctggag
gtgtccaaggatnncactgtatctcaccgcccacagccctatccctggagtcatgagagg
tttgcctcctgccaggccttatgttcccaggctctctcttctgggcagcagtactgggaa
gtggacactcagcaatgtagccactgggcagttggggtggcttcccgggggatgaggcgt
gaccagatcctgggaaggaccagggacttctggtgtgtagagtggaaagggactagccag
ctctctgcatgggacatggtcaagaaaactgtccttggctcaaacagacctagtgtggtg
ggcatctggctggaccttgaggaaggaaagcttgccttctattctgtggctgatcaggtg
acgctcctctatgagtgcccagtctctgttgcctttcctctgcaccctgccntctggctg
tatggcttattccctggaagctctctgactataaggcaaataaacatataa
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