Phocoena sinus (vaquita): 116745539
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Entry
116745539 CDS
T07759
Symbol
EME1
Name
(RefSeq) crossover junction endonuclease EME1 isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03440
Homologous recombination
psiu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116745539 (EME1)
03460 Fanconi anemia pathway
116745539 (EME1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116745539 (EME1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116745539 (EME1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
116745539
NCBI-ProteinID:
XP_032472198
Ensembl:
ENSPSNG00000013179
UniProt:
A0A8C9E423
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Position
20:complement(34310606..34317075)
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AA seq
576 aa
AA seq
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MAVEKSSLALDSSESESEELPTFAFLKKEPSSTKRRQPQKEEKIVVVDTSDSEASCPPSP
KLRDPPPVPETAETVTQTEPVRVLSSGSEDEEEFAPLAERLTCKFLTHKQLSPEGSSSPV
KRVLDHQNNEGASRDWQNQPFTKIRDIPLCDTSERCASSNKDPVVDSPCHQLPACQTTCS
VQSNSVTVTKTNAEVPPPQKRTKPNQKVQRRGSQGCQQRGQAGQKESTQRQRERKKKAAL
ADRLKAQRPEECLKHTVVLLDPVLLQMEGGGQLLGALQSMECCCVIEVPAVPCSITWRRA
GSTEDGEEEWVEEPMVLVLLQAEAFVSMVYNFKQGSLGSTEEGKKTLRSFVTDITARTAG
KALSLVIVDPEKCFRAPNPPRRRKQGVANGEQAKEKKQRQPEANTAALVTRVDMEEALVD
LQLHTEAQARIVQSWKELADLACTFTKAVAEAPFKKLRDQAGFSFCPESDWAGGAKVDRS
GRGLAVVWRRQVQQLNRVSLEMASAVVDAYPSPQLLIQAYKRCSSEQERQNLLADIQVRR
GEGVTATSRRLGPELSRRIYLQMTALQPDLSLDSAD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagagaagtcatcactcgcgctggattccagcgagagtgagtctgaggagctg
ccaacatttgcctttctgaagaaggaaccgtcttcaaccaagaggaggcagcctcagaag
gaggagaagattgtagtggttgacacctcagattctgaggcctcctgtcctccatcacca
aaattgagagatccaccacctgttccagagacagctgaaactgtcacacaaacagagcca
gtcagggtgctaagcagtggaagtgaggatgaggaagaatttgctcccctggctgagaga
cttacttgtaagtttttgacccacaagcagctgagccctgagggctccagctccccagtt
aaaagggttttagatcatcaaaataatgaaggagcatcgcgtgactggcaaaaccagccc
ttcacgaagatccgtgatattcctctctgtgacacctcagagaggtgtgcgtcgagtaac
aaggaccctgtggtagacagtccatgccatcagctgccagcctgccaaactacctgctct
gtccagagcaacagcgtgacagtaactaaaacaaatgctgaggtacccccacctcagaag
agaaccaagcctaatcagaaggtccagaggagaggctcacagggatgccagcagcgggga
caagcaggccaaaaggaaagcacccagaggcaacgggaaaggaagaagaaggcagccctg
gctgacaggctgaaagctcagaggccagaggaatgcttgaagcacaccgttgtgctgctg
gatccagtgctcttgcagatggaaggtgggggccagctcctcggagccctgcagtccatg
gagtgctgctgtgtgattgaggtgccggccgtgccttgcagcatcacgtggagaagggct
gggtccaccgaggatggagaggaggagtgggtggaggagccgatggttctggtgctgctc
caggcagaggcgtttgtgtccatggtctacaacttcaagcaggggagtctgggcagcacc
gaggaagggaagaaaacgcttcggagctttgtaactgacatcacagcaaggacagctggg
aaagctctgtcactggtgattgtggatccggagaaatgcttcagggctccgaatcctcca
aggagaaggaaacagggggtggcaaatggagaacaggccaaggagaagaagcagagacaa
ccggaggccaacacagcggctttggtgaccagggtagacatggaagaggcattggtagat
ctgcagctacacacagaagcccaggctcgaattgtgcagagctggaaagagctggccgac
ttggcctgcacattcacaaaggctgtggctgaggcgcccttcaagaagctccgagatcaa
gctggtttctccttctgcccggagagtgactgggctggaggggcaaaggtggaccgctct
ggcagggggcttgcagtggtctggaggagacaggttcagcagctgaaccgagtcagcctg
gaaatggccagtgccgttgtggacgcctacccctccccacagctcctgatccaggcttat
aagcggtgttcttctgagcaagaacgccagaatctgcttgcagacatacaggtgcgccgt
ggggaaggtgtgacagccacctcccgccgtcttggaccagagctctccaggcgtatctac
cttcagatgaccgctttgcagccagatctctctctagacagtgcagactga
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