Phocoena sinus (vaquita): 116745542
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Entry
116745542 CDS
T07759
Symbol
RHOT1
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116745542 (RHOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116745542 (RHOT1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
psiu04031
]
116745542 (RHOT1)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
116745542 (RHOT1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
116745542 (RHOT1)
GTP-binding proteins [BR:
psiu04031
]
Small (monomeric) G-proteins
Rho Family
Miro
116745542 (RHOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_7
Arf
MMR_HSR1
EF-hand_6
EF-hand_1
SRPRB
RsgA_GTPase
Dynamin_N
AAA_22
Rad4
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
116745542
NCBI-ProteinID:
XP_032472208
Ensembl:
ENSPSNG00000022092
UniProt:
A0A8C9EDU3
LinkDB
All DBs
Position
20:17762967..17824092
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AA seq
704 aa
AA seq
DB search
MRAGRGRPLRAADMKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVT
PERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDK
DSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVL
HPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALE
DVKNVVRKHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYL
FPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGPDVNN
TVCTNEKGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKI
DLQKKQTQRNVFRCNVIGMKNCGKSGVLQALLGRNLMRQKKIRDDHKSYYAINTVYVYGQ
EKYLLLHDISESEFLTEAEILCDVVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLIVAA
KSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPEDHYRDR
LSRDMGNTDRIENLRKIWVFLKTAFHARLRCMCTCNRCTFCICQNFLNSDLLQSVKNKIF
TAVLNRHVTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgggccgaggccggcccctgcgagccgcagacatgaagaaagacgtgcggatc
cttctggtgggagaacctagagttgggaagacatcactgattatgtctctggtcagtgaa
gaattcccagaagaggttcctccccgggcagaagaaatcaccattccagctgatgtcacc
cctgagagagttccaacgcacattgtagattactcagaagcagaacagagtgatgaacaa
cttcatcaagaaatatcacaggctaatgttatctgcatagtttatgctgttaacaacaag
cattctattgataaggtaaccagtcgatggattcctctcataaatgaaagaacagacaaa
gacagcaggctgcctttgatattggttgggaacaaatctgatctggtggaatacagtagt
atggagaccatccttcctattatgaaccagtacacagaaatagaaacctgtgtggagtgt
tcagcaaaaaatctgaagaacatatcggagcttttctattatgcacagaaagctgttctt
catcctacagggcccctgtactgcccagaggagaaagagatgaaaccagcctgtataaaa
gcccttactcgtatatttaaaatatctgatcaagataatgatggtactctcaatgatgct
gaactcaacttctttcagagaatttgtttcaacactccgttagctcctcaagctctagaa
gatgtcaaaaatgtagtcagaaaacatataagtgatggtgtggctgatagtggattgaca
ctgaaaggttttctttttttacacacactttttattcagagagggagacatgaaactact
tggactgtgcttcgacgatttggttatgatgacgatctggatttgacacccgaatattta
tttcccttgctaaaaatacctcctgattgcactactgaattaaatcatcacgcatatttg
tttctccaaagtacttttgacaagcatgatttggatagagactgtgctttgtcacctgat
gagcttaaagacttgtttaaagttttcccttacataccttgggggccagatgtgaataac
acagtttgtacgaatgaaaaaggctggataacctaccagggattcctttcccagtggacg
ctcacgacctatttagatgtgcagcggtgcctggagtatttgggttatctaggctattca
atattgactgagcaagagtctcaagcttcagccatcacagtaacaagagataaaaagata
gaccttcagaaaaaacagactcaaagaaatgtgttcagatgtaatgtaattgggatgaaa
aactgtgggaaaagtggagttcttcaggctcttcttggaagaaacttaatgaggcagaag
aaaattcgtgatgaccataaatcatactatgcaattaacactgtttatgtatatggacaa
gagaaatacttgttgttgcatgatatctcagaatcggaatttctaactgaggctgagatc
ctttgtgatgttgtgtgcctggtatatgatgtcagtaaccctaaatcctttgaatactgt
gccaggatttttaagcaacactttatggacagcagaataccttgcttaatcgtagctgca
aagtcagacctgcatgaagtcaaacaagaatatagcatttcacctactgatttctgcagg
aaacacaaaatgcctccaccacaagccttcacttgcaatactgctgatgcacccagtaaa
gacatctttgttaaattgacaacaatggccatgtacccagaggatcattacagagacaga
ctctcccgagacatgggcaacactgatagaatagagaatttgagaaaaatctgggtcttt
ctaaaaactgctttccatgcccggttacgctgtatgtgcacctgcaacaggtgtacattt
tgcatctgtcagaacttcctcaactcagacttgctgcaatctgtaaagaacaaaatcttc
actgcagttcttaacaggcacgtgacacaagctgacctcaagagctccacattttggctt
cgagcaagttttggtgctactgtttttgcagttttgggctttgctatgtacaaagcatta
ttgaaacagcgatga
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