Phocoena sinus (vaquita): 116745545
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Entry
116745545 CDS
T07759
Symbol
EIF4A1
Name
(RefSeq) eukaryotic initiation factor 4A-I isoform X1
KO
K03257
translation initiation factor 4A
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116745545 (EIF4A1)
03012 Translation factors [BR:
psiu03012
]
116745545 (EIF4A1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116745545 (EIF4A1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116745545 (EIF4A1)
mRNA cycle factors
Stress granule specific factors
116745545 (EIF4A1)
Translation factors [BR:
psiu03012
]
Eukaryotic type
Initiation factors
eIF-4
116745545 (EIF4A1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116745545 (EIF4A1)
Exosomal proteins of bladder cancer cells
116745545 (EIF4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
116745545
NCBI-ProteinID:
XP_032472214
Ensembl:
ENSPSNG00000011169
LinkDB
All DBs
Position
20:complement(8821605..8828422)
Genome browser
AA seq
406 aa
AA seq
DB search
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagtcaggattcccgatctagagacaatggccccgatgggatggagcccgaa
ggcgtcatcgagagtaactggaatgagattgttgacagctttgatgacatgaacctttcg
gagtcactcctccgtggcatctacgcctatggttttgagaagccctctgccatccagcag
cgagccattcttccttgtatcaagggttatgatgtgatcgctcaagcccaatctgggact
gggaaaacggccacttttgccatatcaattttgcagcagattgaattggatctaaaggcc
acccaggccttggtcctggcacccactagagagttggctcagcagatacagaaggtagtt
atggccttaggagattacatgggtgcctcgtgccatgcctgcattgggggtaccaatgtg
cgtgctgaggtgcagaagctgcagatggaagctccccatatcatcgtgggtaccccaggc
cgtgtgttcgacatgcttaaccggagatacttgtctcccaaatacatcaagatgtttgta
ttggatgaagctgatgaaatgttaagccgtgggttcaaggaccagatctatgacatattc
caaaagctcaatagcaacacccaggtggttttgctgtcagctacaatgccttccgatgtg
cttgaggtgaccaagaagttcatgagggacccaattaggattcttgtcaagaaagaagaa
ttgacgctggagggtatccgccaattctacatcaatgtggaaagagaggagtggaagctg
gacacactatgtgacttgtatgaaaccctgaccatcacccaggcagtcatcttcatcaac
acccgaaggaaggtggattggctcactgagaaaatgcatgcccgagacttcaccgtctct
gccatgcacggagatatggaccaaaaagaacgagacgttatcatgagggagttccgctct
ggctctagcagagtattgattaccactgacctactggccagaggcatcgatgtgcagcag
gtttccttagtcatcaactatgacctccccaccaacagggaaaactacatccacagaatc
ggtcgaggtggccgttttggtcgtaagggtgtggctattaacatggtgacagaagaagac
aagaggactcttcgagacattgagaccttctacaacacctccattgaggagatgcccctc
aatgttgctgacctcatctga
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integrated database retrieval system
