Phocoena sinus (vaquita): 116745795
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Entry
116745795 CDS
T07759
Symbol
USP43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116745795 (USP43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116745795 (USP43)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116745795 (USP43)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116745795 (USP43)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116745795 (USP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116745795
NCBI-ProteinID:
XP_032472727
Ensembl:
ENSPSNG00000021281
LinkDB
All DBs
Position
20:complement(7175909..7237525)
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AA seq
1134 aa
AA seq
DB search
MDPGAGAATGEGPPAPRPRRRRSLRRLFGRFLLALGSRSRPGDSPPRPQPQPGHGDGDGE
GGFAGPPGPEPAAPGSPGEERPPRPQPQLPAGDGARIPGAQGLKNHGNTCFMNAVVQCLS
NTDLLAEFLALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQG
NSQHDALEFLLWLLDRVHEDLEGAARGLGSTRQSPSKQHLQPEARKTSEDLLSPSAQLPL
GQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKSQRS
LRVGLAVPILSTVAALRKMVAEEGGIPVDEVILVELHPSGLQRSFFDEEDLNTIAEGDNV
YAFQAPPSPGQEMLSARPSGLPISPCLAVCEGQRLSLPVHSETTVLILFCNLVGSGQQAS
RFGPPFLIREDRAISWVQLHQCILSKVRYLMKSEASVQNLGSLFSIRVVGLSLACSYLSP
KDSQPLYHWTVDRALHLRRPGGPPHIKLAVEWDSGTKEHLFGSIQEERVQDADSVWRQQQ
AHQQQSCTLDECFQFYTKEEQLAQDDAWRCPHCQALQQGVVKLSLWTLPDILIIHLKRFC
QVGERRNKLSTLVKFPLAGLDMAPHVAQRSTGPKASPGPWPPSWKQPACLPTSYPPDFLY
DLYAVCNHHGSLQGGHYTAYCRNSLDGQWYSYDDSTVEPLLEDEVNTRGAYILFYQKRDS
IPPWSASSSMRGSTSSSLSDHWLLRLGSSDGSMRGSLLSWSPTPGPARPQLPGPASCTKS
LPSQEKGGLESRPLARGVQGRSISMKVPTPSRAKQGTFKTMPLRWSFGSREKPLGASIEL
VEYLESRRRPRSTSQSIVPLLMGTAGGDEKSNATLSAKGEDSGRAGDRVLAEAPCPSGHP
GRCTVPGNSDGLNAARNLKESASQDIGLPRQCDLPLTVMSSMDGGKRAWPEGQRTTSCKG
SGLAGSSGQTPSPKKAPSAATLSRNSADSCPNTFGKMRANVERRDPATDRFPQGTLPFLR
SVFWRRESRKSDRAEAVSGRQSPAVNERARGSPPSLRIRESLARGPASPLERDVRSAPSS
LRLPRKAGRLPRATALGTSQRSVPGEQTSFGTLPKVKYHTLSLGRKKTLPESSF
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacccgggcgcgggggccgcgaccggagaggggccgcccgcgccccggccccgccgc
cgccgctccctgcgccgcctgtttggccgcttcctgctggcgctgggcagccgctcccgc
cccggggactcgccgccccggccccagccccagccgggacacggcgatggcgacggggag
ggaggctttgctggccccccgggcccggagccagctgcgcccggaagccccggggaggag
cgcccgccccgaccccagccccagctccccgccggcgacggggcgcggatcccgggagct
cagggcttgaagaaccacggcaacacctgtttcatgaacgccgtggtgcagtgtctcagc
aacaccgacctgctggccgagttcctggcgctggggcgctatcgggcggcgccgggccgc
gccgaggtcaccgagcagctggcggcgctggtgcgcgcgctctggacgcgcgaatacacg
ccccaactttccgccgagttcaagaatgccgtctccaagtatggctctcagttccaaggc
aattcccagcacgacgccctggagttcctgctctggttgctggatcgtgtgcacgaggac
ttggagggcgcggcccgggggctggggtcgacaaggcagtcgccctcgaaacaacacctt
cagcctgaagccaggaagacctccgaggacctcctgtcgccatcagctcagcttcctcta
ggccaaagctttgtgcaaagccactttcaagcacagtacagatcttccttgacctgtccc
cactgcctgaaacagagcaacaccttcgatcctttcctgtgtgtgtcgctgcctatcccc
ttgcgacagacgagattcttgagcgtcaccttggtcttcccctctaagagccagcggtcc
ctgcgggttggcctggccgtgccaatcctcagcacggtggcagccctgaggaagatggtt
gcagaggaaggtggcatccctgtggatgaggtgatcttggttgaacttcatcccagtgga
ctccagcggtctttctttgatgaagaggacttgaatactattgcagagggagataatgtg
tatgccttccaagcccctccgtcacctggccaggagatgctctcagctcgtccatctggt
ctacccatctccccatgcttggcagtctgcgagggtcagcgattatccctgcccgtccac
agcgagaccacggtgctaatcctcttctgtaatttggtgggctcaggccagcaggccagc
aggtttgggccacctttcctgattagggaagacagagccatctcatgggtccagctccat
cagtgcattctcagcaaggtccgctatctcatgaagagcgaggcttccgtacagaacctg
gggtcacttttctccatccgggttgtggggctgtccctggcctgcagttacttgtcccca
aaggacagccagcccctctatcactggacagttgacagggctctgcacctcaggaggccg
ggaggccccccgcacatcaaactggccgtggagtgggacagtggcaccaaggagcacctg
ttcgggagcatccaggaggagcgagtccaggacgcggacagcgtgtggcggcagcagcaa
gcccaccagcagcagagctgcaccctggacgagtgtttccagttctacaccaaggaggag
cagctggcccaggacgatgcgtggcggtgtccccactgccaggccctgcagcagggcgtg
gtgaagctgagcctgtggaccctgcccgacatcctcatcatccacctcaaacggttctgc
caagtgggcgaaaggagaaacaagctctccacgctggtgaagttcccgctcgccggcctc
gacatggctccccatgtggcccagagaagcacgggccccaaggcctccccgggcccctgg
cctccttcctggaagcagccggcctgcctgcccaccagctacccaccagacttcctgtat
gacctgtacgcggtctgcaaccaccacggcagtttgcaaggtgggcattacacagcctac
tgccggaactctctggatggccagtggtacagttatgacgacagcacggtggaaccgctt
ctagaagatgaggtcaatacgcgaggggcttacatcctgttttatcagaagagagacagc
atccctccctggtcagccagcagctccatgagaggttccaccagttcctccttgtccgat
cactggctcctccggcttgggagcagtgatggtagcatgaggggcagcctgctgtcctgg
agccccacccccggccctgcccggccccagctgcctgggcctgcctcctgcaccaagagc
ctccccagccaagaaaagggaggcttggagtccaggcctttggcacggggtgtccaaggc
cgcagcatcagcatgaaggtgcccaccccttcccgagccaagcaggggaccttcaagacc
atgcccctccggtggtcttttggctccagggagaaacccctgggtgcatccatcgagctg
gtagagtacttggagtccagacggagacctcggtccacgagccagtccatcgtgccgctg
ctgatgggcacggctggtggggatgagaagtcaaacgccaccctctctgctaagggtgaa
gatagtgggcgagccggcgacagagtgctggccgaagcgccctgcccctcgggccacccc
ggccgctgcacggtccctggcaactcagatggcctgaacgcagcaaggaacctcaaggaa
agcgcaagtcaggatatcgggctgcccagacagtgtgacctgcccctcacagtgatgtcc
tcaatggacggcgggaaacgagcctggccggagggccaaaggaccacaagctgtaaggga
agtggcctggcagggagcagtggccaaacaccctcccccaagaaggctcccagcgctgcg
acgttatctagaaacagtgcagacagttgcccaaatacttttggcaagatgagggctaat
gtggagagaagggaccccgcgacagacagattcccacagggaaccctcccctttctgagg
tctgtgttttggaggagggagagcaggaagagtgacagggcagaggcggtgagtggcagg
cagagccccgctgtgaatgagcgggcccggggttcgcctccatccctcaggattcgagag
agcctggccaggggccctgccagccccctggagagggacgtccggtccgcgcccagctct
ctgcgcctccctcgcaaggccggcaggctcccgagggccactgcccttggcacatcacag
aggagtgtccctggggagcagacttctttcggcaccttgccaaaggtgaagtaccacacg
ctctccttaggtcggaagaaaacattgcccgagtccagcttctga
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