Phocoena sinus (vaquita): 116745816
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Entry
116745816 CDS
T07759
Name
(RefSeq) C-type lectin domain family 10 member A-like isoform X1
KO
K06721
C-type lectin domain family 10 member A
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
psiu04054
]
116745816
04090 CD molecules [BR:
psiu04090
]
116745816
04091 Lectins [BR:
psiu04091
]
116745816
Pattern recognition receptors [BR:
psiu04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
116745816
CD molecules [BR:
psiu04090
]
Proteins
116745816
Lectins [BR:
psiu04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
116745816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_N
Lectin_C
DUF4709
FKBP15
DUF2508
Filament
Baculo_PEP_C
Mis12
GAS
DUF5682
DUF7491
FapA
FUSC
FlgK_D1
DUF848
Myosin_tail_1
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
116745816
NCBI-ProteinID:
XP_032472759
LinkDB
All DBs
Position
20:9239825..9244986
Genome browser
AA seq
311 aa
AA seq
DB search
MSVKYEDLQYLESEKKSQGFTDGLPALETFLQRLLSSTRSFLLSLGLSLLLLVGICVIGS
QNSKFQRDLATLRTTFSNFTSNTTAEVQALKSQGEPGGSLQEMITSLKAEVESHKQELQA
ARSLNDKVLSLESSLENQLQELKAGYSEMLLRVQQLVKNLNSLTCKMAALKSNGSQNNCC
PTSWLEHEGSCYWFSYSGKPWPEAEKYCQLEDAYLVVINSREEQDFVQAHIGSSYTWMGL
SDLDGVWKWADGTDYETNFKNWKPGQPDDWQGHGLGGGEDCAHFHPDGKWNDDACQRPYH
WICEAGLSKGS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaagtatgaagacctccagtacttggagagtgagaagaaaagccaggggttt
acagatgggctgcctgccctcgagaccttcctgcagcggctcctctccagcacccgctcc
ttcctgctctccctgggcctcagcctcctcctgctggtcggcatctgtgtgatcggatcc
caaaattccaagtttcagagggacctggcaaccctgagaacaactttcagcaacttcact
tcaaacactacggctgaggtccaggcactgaaatcccagggtgagcctggtggaagtttg
caagaaatgataacatctctgaaagctgaggtggaaagtcacaagcaggaactgcaagca
gcccgtagcttgaatgacaaggtgctttctctggagagcagcctggagaaccagctgcag
gaactcaaagcaggttattccgaaatgctcttgcgagtccaacagctggtcaagaacctg
aactccctgacctgcaagatggctgctctcaagagcaatggctcgcaaaacaactgctgt
cctaccagttggctggagcatgaaggcagctgctactggttctcttactcggggaagccc
tggcccgaggctgagaagtactgccagctggaggatgcctacctggtggtcatcaactcc
agagaggagcaggattttgtccaggcccatataggctcctcctacacctggatgggcctc
agtgatctggatggagtctggaaatgggcggatgggacggactatgagaccaacttcaag
aactggaagccaggccagccagacgactggcaagggcacgggctgggtgggggcgaggac
tgtgcccacttccaccccgatggcaagtggaatgacgacgcgtgccagagaccctaccac
tggatctgcgaggccgggctgagcaagggcagctag
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integrated database retrieval system
