Phocoena sinus (vaquita): 116745839
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Entry
116745839 CDS
T07759
Symbol
CLUH
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psiu03012
]
116745839 (CLUH)
Translation factors [BR:
psiu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116745839 (CLUH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_NPHP3
TPR_MalT
GSKIP_dom
TPR_2
Motif
Other DBs
NCBI-GeneID:
116745839
NCBI-ProteinID:
XP_032472804
Ensembl:
ENSPSNG00000020063
UniProt:
A0A8C9E9D1
LinkDB
All DBs
Position
20:12262878..12284646
Genome browser
AA seq
1349 aa
AA seq
DB search
MVIKTDELPAAAPADSAREPSSQAGGKGRPGAAELPSVMLLNGDCPESLKKEEGAAEPPR
ENGLDEAEPGEETTGQEVIVIQDTGFSVKILAPGIEPFSLQVSPQEMVQEIHQVLMDRED
TCHRTCFSLHLDGNMLDHFSELRSVEGLQEGSVLRVVEEPYTVREARIHVRHVRDLLKSL
DPSDAFNGVDCNSLSFLSVFTDGDLGDSGKRKKGLEMDPIDCTPPEYMLPGSRERPLCPL
QPQNRDWKPLQCLKVLTMSGWNPPPGNRKMHGDLMYLFVITAEDRQVSITASTRGFYLNQ
STAYHFNPKPASPRFLSHSLVELLNQISPTFKKNFAALQKKRVQRHPFERIATPFQVYSW
TAPQAEHAMDCVRAEDAYTSRLGYEEHIPGQTRDWNEELQTTRELPRKNLPERLLRERAI
FKVHSDFTAAATRGAMAVIDGNVMAINPSEETKMQMFIWNNIFFSLGFDVRDHYKDFGGD
VAAYVAPTNDLNGVRTYNAVDVEGLYTLGTVVVDYRGYRVTAQSIIPGILERDQEQSVIY
GSIDFGKTVVSHPRYLELLERTSRPLKILRHRVLNDRDEEVELCSSVECKGIIGNDGRHY
ILDLLRTFPPDLNFLPVPGEVLPEECTRAGFPRAHRHKLCCLRQELVDAFVEHRYLLFMK
LAALQLMQQKASKMETPPSLENGDPPSSESKPEDPPAPEVGSEEEGSSASGLAKVKELAE
TIASDDGTADPRSREVIRNACKAVGSISSTAFDVRFNPDIFSPGVRFPESCQEEVRDQKQ
LLKDAAAFLLSCQIPGLVKDFADHAVLPMDGATLAEVMRQRGINMRYLGKVLDLVLRSPA
RDQLDHIYKIGIGELITRSAKHIFKTYLQGVELSGLSAAISHFLNCFLSSYPNPVAHLPA
DELVSKKRNRRRRNRPPGAADNTAWAVMTPQELWKNICQEAKNYFDFSLECETVDQAVET
YGLQKITLLREISLKTGIQILLKEYSFDSRHKPAFTEEDVLNIFPVVKHVNPKASDAFHF
FQSGQAKVQQGFLKEGCELINEALNLFNNVYGAMHVEICACLRLLARLHYIMGDYAEALS
NQQKAVLMSERVMGIEHPNTIQEYMHLALYCFASSQLSTALSLLYRARYLTLLVFGEDHP
EMALLDSNIGLVLHGVMECELSLRFLENALAVSTKYHGPKSLKVALSHHLVARVYESKAE
FRSALQHEKEGYTIYKTQLGEDHEKTKESSEYLKCLTQQAVALQRTMNEIYRNGSSANIP
PLKFTAPSMASVLEQLNVINGILFIPLSQKDLENLKAEVARRHQLQEASGNRDKAEEPMA
TEPEPAGASEDVASQPPAAKDPPSLSLQG
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcaaaacagacgagttgccggcggccgccccggcggacagcgcccgggagccc
agctcgcaggccggtggcaaggggcggccgggcgcggcggagctgccatcagtcatgctg
ttgaatggggactgcccggagagcctgaaaaaggaagagggggctgccgaaccgccccgg
gaaaatgggctggatgaggctgagccgggagaggagaccactggacaggaagtcattgtc
attcaggacacgggcttttctgtgaagatcctggctcctgggatcgagcccttctccctc
caggtgtccccccaggagatggtacaggagatccaccaggtgctcatggaccgtgaagac
acatgtcaccgcacctgcttctcactgcacctggacggcaacatgctggaccacttctca
gagctgcgcagtgtggaggggctgcaggagggctcggtgctacgcgtggtggaagagcca
tacacggtgcgagaggcccgcatccacgtgcgccacgttcgagacctgctcaagagcctg
gacccatccgatgccttcaacggggttgactgcaattccttgtccttcctgagtgtcttt
actgatggcgacctgggagacagcgggaagcggaagaagggcttggagatggaccccatc
gactgtacaccgcctgagtacatgcttccagggagccgggagcggccgttgtgtcctctg
cagccccagaaccgtgattggaagcccctgcagtgcctgaaagtgctcaccatgagcggc
tggaacccaccccctgggaatcgcaagatgcacggggacctcatgtacctgtttgtgatc
acagccgaggaccgacaagtcagcatcacggcatccactcggggattttacctgaaccag
tccacagcgtaccacttcaaccccaagcctgccagcccccgcttcctcagccattccctg
gtggagctgctcaaccagatcagcccaaccttcaaaaaaaactttgctgccctgcagaag
aaaagggtccagcgccacccgttcgagaggatcgccaccccattccaggtatacagctgg
acagcgccccaggcggagcacgccatggactgtgtgcgcgcagaggacgcctacacctcc
cggctgggctacgaggagcatattccaggacagacccgggactggaatgaagagctgcag
acaacgcgggagctgcctcggaagaacctgcctgagcggctgctgcgagaaagagccata
ttcaaggtacacagcgacttcacagcggcagccacgcggggcgccatggcagtcatcgat
ggcaacgtgatggccatcaaccccagcgaggagaccaagatgcagatgttcatctggaac
aacatcttcttcagcttgggctttgatgtccgcgaccactacaaggacttcgggggggac
gtggcggcctatgtggcgcccaccaatgacctcaatggcgtgcgcacatacaatgccgtg
gacgtggaggggctgtacacgctgggcacggtggtggtggattaccgcggctaccgtgtc
acggcccagtccatcatccccggcatcctggagcgggaccaggagcagagcgtcatctac
ggctccattgactttggcaagacggtggtgtcgcacccacgttacctggagctgctggaa
cgcacgagccggcccctcaagatcctgaggcaccgggtgctcaacgaccgggacgaggag
gtggagctctgctcctccgtggagtgcaagggcatcatcggcaacgacggtcgccactac
atccttgacttgctgcgcaccttcccccccgacctcaacttcctgcccgtgcccggcgag
gtgctgcccgaggagtgcacccgcgccggtttcccccgcgcccaccgccacaagctctgc
tgcctgcgccaggagctggtggacgccttcgtggagcacaggtacctcctcttcatgaag
ctggcagccctacagctgatgcagcagaaggccagcaagatggagacacccccgtcactg
gaaaacggcgaccccccatcctcggagtctaagcctgaagaccctccagcacccgaggtg
ggaagcgaggaggagggcagcagtgctagtggcctggccaaggtgaaggagctggcagag
accatcgcctcggacgacgggacagcagaccctcgcagtcgggaggtgatccgcaacgca
tgcaaggctgtgggctccatcagcagcacggcctttgacgtccgcttcaaccccgacatc
ttctcgccaggggttcgcttcccggagtcttgccaggaggaagttcgggaccagaagcag
ctgctaaaagatgctgctgccttcctgctctcctgccagatccccggcttggtgaaggac
ttcgcagaccacgcggtgctgcccatggacggggccacgctggccgaggtgatgcgccag
cgcggcatcaacatgcgctacctgggcaaggtgctggacctggtactccggagcccggcc
cgggaccagctggaccacatctacaagatcggcatcggagagctcatcacccgctctgcc
aagcacatcttcaagacgtacttacagggggtcgagctctcggggctctcggctgccatc
agccacttcctgaactgcttcctgagctcctaccccaaccccgtggcccacctgcccgcc
gacgagcttgtctccaagaagaggaacaggaggaggagaaaccggccgccaggggcagcg
gataacacagcctgggctgtcatgaccccccaggagctttggaagaacatctgccaggag
gccaagaactactttgacttcagcctcgagtgtgagaccgtggaccaggctgtggagacc
tacgggctgcagaagatcacgctgctgcgggagatctccctgaaaaccggaatccagatc
ctgctgaaggagtacagcttcgacagccgccacaagcccgcgttcacggaggaggacgtg
ctcaacatcttccctgtggtcaaacacgtcaacccgaaggcttcagacgcctttcacttc
ttccagagcgggcaggccaaagtacagcagggcttcctgaaggagggctgcgagctcatc
aacgaggccctgaacctgttcaacaacgtgtacggagccatgcacgtggagatctgtgcc
tgcctgcgcctcctcgcccgcctccactacatcatgggcgactacgctgaggccctcagc
aaccaacagaaggctgtgctgatgagcgagcgagtgatgggcatcgagcaccccaacacc
atccaggaatatatgcacctggccctgtactgcttcgccagcagccagctgtccacggcc
ctgagcctgctgtaccgcgcccgctacctcacactgctcgtgttcggggaggaccaccct
gagatggccctgctggacagcaacatcgggctggtgctgcacggagtgatggagtgtgag
ctatcgctgcgcttcctggagaacgcgctggccgtcagcaccaagtaccatggacccaag
tccctcaaggtggccctcagccaccacctggtcgcccgggtctatgagagtaaagccgag
ttccggtcagccctgcagcacgagaaggaaggctacaccatctacaagacgcagctgggc
gaggaccacgagaagaccaaggagagctccgagtacctcaagtgcctgacccagcaggcc
gtggccctgcagcgcaccatgaacgagatctaccgcaacggctccagcgccaacatcccg
cccctcaagttcacagcccccagcatggccagcgtcttggaacagctgaacgtcatcaac
ggcatcctcttcattcctctcagccaaaaagacttggagaatctgaaagctgaggtggcg
cggcggcaccagctccaggaggccagcgggaacagggataaggctgaggagcctatggct
actgagccagagccagcaggggcctcagaggatgtggcctcccagcccccagctgccaag
gaccctccttccctgagcttgcaggggtag
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