Phocoena sinus (vaquita): 116745859
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Entry
116745859 CDS
T07759
Symbol
TRIM65
Name
(RefSeq) tripartite motif-containing protein 65 isoform X1
KO
K12031
tripartite motif-containing protein 65
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116745859 (TRIM65)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116745859 (TRIM65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
PRY
zf-RING_5
zf-B_box
zf-RING_4
zf-rbx1
zf-RING_6
U-box
zf-RING_10
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116745859
NCBI-ProteinID:
XP_032472842
Ensembl:
ENSPSNG00000015646
LinkDB
All DBs
Position
20:51363597..51370057
Genome browser
AA seq
586 aa
AA seq
DB search
MGSQPRSRRRRVERAHWEWRLVGEEEGLSSSFSQAGPGSARRTHTRVPAVPLRGPGLPPA
RLEPLAANMAAQWLEDRLTCAICLGLYQDPVTLFCGHNFCRACIQDWLGRSEKVCPECRE
PFPDSAELRRNVALSGVLEELRVRPASDPGLGACCPRHGRPLELFCRTEGLCVCSVCTVR
ECRLHERTLLDAERREREAQLRATLEVTQQQATQAESQLQELQQRSSQIQSSACTLTSVI
SGKFNRLLQALEMQRNLALRDIEVAKTQALEQARDEKQRLQGHLEALSCCDHRIRNLLEQ
LDDRTFLQESQLLAPPGPLGPLTLPHWDEDQQLGGLKESLSQLCALLLEEGGHPRAPAEA
ADFGSMEAPGPLAPVASLVCPLRRKLWQSKKAHRMYYRNLTFDPISANRHFYLSQQDRRV
KHCRKPRGPDGPGSFELWQVQCAQSFQAGQHYWEVRVSNHSVTLGVAYSELTRRKLGPHT
DNIGRGPSSWGLCIQEDSTQAWHNGEAQRLPGVSGRLLGMDLDLTSGCLTFYSLEPETQH
LYTFHAIFSRPLYPVFWLLEGRTLTLCHRPEAKLPPGLQEEASGLS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccaaccccgcagccgtcggcgcagggtggagcgagcgcactgggagtggcgg
ctggtcggggaggaagaagggctgtcaagttcgttttcccaggcgggtcctggctccgcc
cgccgcacccacacccgggtgccggcggtccctttgagaggccccggccttccgcccgcg
cgtctggagccgctcgccgccaacatggccgcgcagtggctggaggacaggctgacctgt
gccatctgcctggggctctaccaggacccggtgacgctgttctgcggccacaacttctgc
agggcctgtatccaggactggttgggccgcagcgagaaggtgtgccccgagtgccgggag
cccttccccgacagcgccgagctgcgccgcaacgtggctctgagcggcgtgctggaggag
ctgcgcgtccggccggcgtccgaccccggcctcggcgcgtgctgcccccggcacgggagg
ccgctcgagcttttctgccgcaccgagggcctctgcgtgtgcagcgtgtgcaccgtgcgc
gagtgtcgcctccacgagcggacgctgctggacgccgagcgccgagagcgcgaggcccag
ctgagagccacactggaggtcacccagcagcaggccacccaggctgagagccagctacag
gagctgcagcagcgaagcagccagatccagagctcagcctgcaccctgacctccgtgatc
tctggcaagttcaaccgcctgctgcaggccctggagatgcagcggaacttggccctgagg
gacatcgaggtggccaagacacaggcgctggaacaggcccgggacgagaaacagcgactg
cagggccacctggaggccttgtcttgctgtgaccacaggattcgcaacctcctggagcaa
ttggacgaccggaccttcctccaggaatcacagctcctggcgcccccaggccctcttggg
ccactgactctcccacactgggacgaagatcagcagctgggcggcctgaaggagtccctg
agccagctgtgtgccctcctcctggaagaggggggccaccccagagcaccagccgaggct
gctgactttggctccatggaggccccaggtcccctggcaccagtcgcgagcctcgtttgt
ccactgaggaggaaactctggcagagtaagaaggcccatcgaatgtattatcgcaacctg
accttcgaccccatcagcgccaaccgtcacttctacctgtctcagcaggaccggcgggta
aagcactgtcgcaagccccggggcccagatgggccgggcagcttcgagctctggcaagtg
cagtgtgcccagagcttccaggccgggcagcactactgggaggtacgtgtgtccaaccac
tcggtgacactgggcgttgcctactcagaactaacgaggcgcaagctggggccccacacg
gacaacatcggccgtgggcccagctcctgggggctctgcattcaggaggacagcacccag
gcctggcacaacggggaggcccagcgcctcccgggggtatcagggcggctcctgggcatg
gatttggacctgacctctggctgcctcaccttctacagcctggagcccgagacccaacac
ttgtataccttccatgccattttctcccggcccctctaccccgttttctggctcctcgag
ggtaggaccctgaccctgtgccatcggcccgaggccaagctccctccagggctccaggaa
gaggcctcagggctcagctga
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