Phocoena sinus (vaquita): 116745895
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Entry
116745895 CDS
T07759
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
116745895 (HNF1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116745895 (HNF1B)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116745895 (HNF1B)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
116745895
NCBI-ProteinID:
XP_032472911
Ensembl:
ENSPSNG00000019157
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Position
20:complement(32721727..32774409)
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AA seq
558 aa
AA seq
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MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGAEPDTKP
VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQSSGNLTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSSSQTHGLNPLLSHGSPPHQPSTSPPNKLPGVRYSQQGNNEV
TSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGGLPPVSTLTNI
HSLSHHNPQQSQNLIMTPLSGVMAIAQSLNSSQAQSVPVINSVAGSLAALQPVQFSQQLH
SSHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSS
ISTLTNMSSSKQCPLQAW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagctcacgtcgctccagcaagaactcctgagcgccctgctgagctccggg
gtcaccaaggaggtgctggtccaggccttggaggagttgctgccatccccgagtttcggg
gtgaagctggagacgctgcccctgtcccctgggagcggggccgagccggacaccaagccg
gtcttccatactctcacgaacggccacgccaagggccgtctgtccggggacgagggctcc
gaggacggggacgactatgacacccctcccatcctcaaggagctgcaagccctcaacacc
gaggaggcggcggagcagcgggcggaggtggaccggatgctcagcgaggacccttggagg
gctgccaaaatgatcaagggctacatgcagcaacacaacatcccccagagggaggtggtc
gatgtcaccggcctgaaccagtcacacctctcccagcatctcaacaagggcacccctatg
aagacccagaagcgcgccgccctgtacacctggtacgtccgaaagcaacgggagatcctc
cgacaattcaaccagacagtccagagttctggaaatttgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcagtcaacagagccaggggcctgggcagtccgat
gacgcctgctctgagcccaccaacaagaagatgcgtcgcaaccggttcaaatgggggccc
gcgtcccagcaaatcttgtaccaggcctacgaccggcaaaagaaccccagcaaggaagag
agggaggccttagtggaggagtgcaacagggcggaatgtttgcagcggggtgtctccccc
tccaaggctcacggcctgggctccaacctggtcactgaggtccgcgtctacaactggttt
gcgaaccgcaggaaggaggaggcattccggcagaagctggccatggacgcctacagctcc
agccagacgcatggcctgaacccgctgctctcccacggctcccccccgcaccagcccagc
acctcccctcccaacaagctgccaggagtgcgctacagccagcagggaaacaatgaggtc
acttcctcctcaacaatcagtcaccatggcaacagcgccatggtgactagccagtctgtt
ttacagcaagtctctccagccagcctggacccgggccacaatctcctctcacctgatggt
aaaatgcagatctcagtctcaggaggaggtttgcccccggtcagcaccttgacgaatatc
cacagcctgtcccaccacaatccccagcaatctcaaaacctcatcatgacccccctctct
ggagtcatggccattgcacaaagcctcaactcctcccaagctcagagcgtccctgtcatc
aacagcgtggccggcagcctggcagccctgcagcccgtccagttctcccagcagctgcac
agctctcaccagcagcccctcatgcagcagagcccgggcagccacatggcccagcagccc
ttcatggccgctgtgacgcagctgcagaactcacacatgtacgcacacaagcaggaaccc
ccccagtattcccacacctcccggtttccatcggcaatggtggtcacagataccagcagc
atcagtacactcaccaacatgtcttccagtaaacagtgtcctctccaagcctggtga
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