Phocoena sinus (vaquita): 116745938
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Entry
116745938 CDS
T07759
Symbol
NF1
Name
(RefSeq) neurofibromin isoform X1
KO
K08052
neurofibromin 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01521
EGFR tyrosine kinase inhibitor resistance
psiu04010
MAPK signaling pathway
psiu04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116745938 (NF1)
04014 Ras signaling pathway
116745938 (NF1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
116745938 (NF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_NF1
RasGAP
CRAL_TRIO_2
CRAL_TRIO
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
116745938
NCBI-ProteinID:
XP_032472983
Ensembl:
ENSPSNG00000021244
LinkDB
All DBs
Position
20:16876169..17128911
Genome browser
AA seq
2995 aa
AA seq
DB search
MKPAGAGACAAGPLSSRFPLPFPSRALNLELARSPSPRAVERIPLPVGCHGGVSDCDGCG
ETALVGRATKRPPPLPESPSPVPSPKPPRQRPFPFPPPGRAPATIPTPVGTFGACTPQPL
SSPLPSPQPPLPALFPALGAGRPVPPPPPGRGEDMAAHRPVEWVQAVVSRFDEQLPIKTG
QQNTHTKVSTEHNKECLINISKYKFSLVISGLTTILKNVNNMRIFGEAAEKNLYLSQLII
LDTLEKCLAGQPKDTMRLDETMLVKQLLPEICHFLHTCREGNQHAAELRNSASGVLFSLS
CNNFNAVFSRISTRLQELTVCSEDNVDVHDIELLQYINVDCAKLKRLLKETAFKFKALRK
VAQLAVINSLEKAFWNWVENYPDEFTKLYQIPQTDMAECAEKLFDLVDGFAESTKRKAAV
WPLQIILLILCPEIIQNISKDVVDENNMNKKLFLDSLRKALAGHGGSRQLTESAAIACVK
LCKASTYINWEDNSVIFLLVQSMVVDLKNLLFNPSKPFSRGSQPADVDLMIDCLVSCFRI
SPHNNQHFKICLAQNSPSTFHYVLVNSLHRIITNSALDWWPKIDAVYCHSVELRNMFGET
LHKAVQGCGAHPAIRMAPSLTFKEKVTSLKFKEKPTDLETRSYKYLLLSMVKLIHADPKL
LLCNPRKQGPETQGSTAELITGLVQLVPQSHMPEIAQEAMEALLVLHQLDSIDLWNPDAP
VETFWEISSQMLFYICKKLTSHQMLSSTEILKWLREILICRNKFLLKNKQADRSSCHFLF
LYGVGCDVPSSGNTSQVSIDHEELLRTCTPGTSLRKGKGNSSMDSAAGYSGTPPICRQAQ
TKLEVALYMFLWSPDTEAVLVAMSCFRHLCEEADIRCGVDEVSVHNFLPNYNTFMEFASV
SNMMSTGRAALQKRVMALLRRIEHPTAGNTEAWEDTHAKWEQATKLILNYPKAKMEDGQA
AESLHKTIVKRRMSHVSGGGSIDLSDTDSLQEWINMTGFLCALGGVCLQQRSNSGLATYS
PPMGPVSERKGSMISVMSSEGNADTPVSKFMDRLLSLMVCNHEKVGLQIRTNVKDLVGLE
LSPALYPMLFNKLKNTISKFFDSQGQVLLTDTNTQFVEQTIAIMKNLLDNHTEGSSEHLG
QASIETMMLNLVRYVRVLGNMVHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEY
LTDWVMGTSNQAADDDVKCLTRDLDQASMEAVVSLLAGLPLQPEEGDGVELMEAKSQLFL
KYFTLFMNLLNDCSEVEDENAQTGGRKRGMSRRLASLRHCTVLAMSNLLNANVDSGLMHS
IGLGYHKDLQTRATFMEVLTKILQQGTEFDTLAETVLADRFERLVELVTMMGDQGELPIA
MALANVVPCSQWDELARVLVTLFDSRHLLYQLLWNMFSKEVELADSMQTLFRGNSLASKI
MTFCFKVYGATYLQKLLDPLLRIVITSSDWQRVSFEVDPTRLEQSESLEENQRNLLQMTE
KFFHAIISSSSEFPPQLRSVCHCLYQATCHSLLNKATVKEKKENKKSVVSQRFPQNSIGA
VGSAMFLRFINPAIVSPYEAGILDKKPPPRIERGLKLMSKVLQSIANHVLFTKEEHMRPF
NDFVKSNFDAARRFFLDIASDCPTSDAVNHSLSFISDGNVLALHRLLWNNQEKIGQYLSS
NRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHWSSLNLTSSKFEEFMTRHQVHEKEEF
KALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVD
LTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSK
RLIFIDCPGKLAEHIEHEQQKLPAATLALEEDLKVFHNALKLAHKDTKVSIKVGSTAVQV
TSAERTKVLGQSVFLNDIYYASEIEEICLVDENQFTLTIANQGTPLTFMHQECEAIVQSI
IHIRTRWELSQPDSIPQHTKIRPKDVPGTLLNIALLNLGSSDPSLRSAAYNLLCALTCTF
NLKIEGQLLETSGLCIPANNTLFIVSISKTLAANEPHLTLEFLEECISGFSKSSIELKHL
CLEYMTPWLSNLVRFCKHNDDAKRQRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQIT
DLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTCLS
PTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTFLVATGPLSLRASTHG
LVINIIHSLCTCSQLHFSEETKQVLRLSLTEFSLPKFYLLFGISKVKSAAVIAFRSSYRD
RSFSPGSYERETFALTSLETVTEALLEIMEACMRDIPTCKWLDQWTELAQRFAFQYNPSL
QPRALVVFGCISKRVSHGQIKQIIRILSKALESCLKGPDTYNSQVLIEATVIALTKLQPL
LNKDSPLHKALFWVAVAVLQLDEVNLYSAGTALLEQNLHTLDSLRIFNDKSPEEVFMAIR
NPLEWHCKQMDHFVGLNFNSNFNFALVGHLLKGYRHPSPAIVARTVRILHTLLTLVNKHR
NCDKFEVNTQSVAYLAALLTVSEEVRSRCSLKHRKSLLLTDISMENIPMDTYPIHHGDPS
YRTLKENQPWSSPKGSEGYLAASYPPAGQTSPRARKSMSLDMGQPSQANTKKLLGTRKSF
DHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQRISSSQQHPHLRKVSVSESNVL
LDEEVLTDPKIQALLLTVLATLVKYTTDEFDQRILYEYLAEASVVFPKVFPVVHNLLDSK
INTLLSLCQDPNLLNPIHGIVQSVVYHEESPPQYQTSYLQSFGFNGLWRFAGPFSKQTQI
PDYAELIVKFLDALIDTYLPGIDEETSEESLLTPTSPYPPAVQSQLSITANLNLSNSMTS
LATSQHSPGIDKENVELSPTTGHCNSGRTRHGSASQVQKQRSAGSFKRNSIKKIV
NT seq
8988 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggccggagcgggcgcatgcgctgcaggccccctttcctctcgcttccccctc
ccctttcccagccgcgctctcaatctcgagctcgctcgctctccctctccccgggccgtg
gaaaggatcccacttccggtggggtgtcatggcggcgtctcggactgtgatggctgtggg
gagacggcgctagtggggagagcgaccaagaggccccctcccctccccgagtccccctcc
cccgtcccctcccccaagcctcctcgccaacgccccttcccctttccccctcccggccgg
gcgccggccaccatccccacccccgtgggaacgttcggcgcctgcactcctcagcccctc
tcttcgcctctcccctcacctcagcccccgctccccgccctcttcccggccctgggcgcc
ggccgcccggtccctccgccgccccccggccgcggggaggacatggccgcgcacaggccg
gtagaatgggtccaggccgtggtcagccgcttcgacgagcagcttccaataaaaacagga
cagcagaacacacataccaaagtcagtaccgaacacaacaaggaatgtcttatcaatatt
tccaaatacaagttttctttggttataagcggcctcaccactatcttaaagaatgttaac
aatatgagaatatttggagaagctgctgaaaaaaatttatatctctctcagttgattata
ttggatacactggaaaaatgtcttgctgggcaaccaaaggacacgatgaggttagatgaa
acgatgctggtcaaacagttgctgccagaaatctgccattttcttcacacttgtcgtgag
ggaaaccaacatgcagctgaacttcggaattctgcctctggggttttattttctctcagc
tgcaacaacttcaatgcagtctttagtcgaatttctaccaggttacaggaattgactgtt
tgttcagaagacaatgttgatgttcatgatatagaattgttacagtatatcaatgtggat
tgtgcaaaattaaaacgactcctgaaggaaacagcatttaaatttaaagccctaaggaaa
gttgcacaattagcggttataaatagcctggaaaaagcattttggaactgggtagaaaat
tatccagatgaatttacaaagttataccagattccacagactgatatggctgagtgtgca
gaaaaactctttgacctagtggatggttttgctgaaagcaccaaacgtaaagcagcagtt
tggccactacaaatcattctccttatcttgtgtccagaaataatccagaatatatccaag
gatgtggttgatgaaaacaacatgaataagaagttgtttctggacagtctacgaaaagca
cttgccggccacggaggaagcaggcagctgactgaaagtgctgcaatcgcctgtgtcaaa
ctgtgtaaagcaagtacttacatcaattgggaagataactctgtcatcttcttactagtt
cagtccatggtggttgatcttaagaacctgctttttaatccaagtaaaccattctcaaga
ggcagtcagcctgcagatgtggatctaatgattgactgccttgtttcttgctttcgtata
agccctcacaacaaccaacactttaagatctgtctggctcagaattccccttctacattt
cactatgtgctggtaaattcactccatcgaatcatcaccaattctgcattggattggtgg
cctaagattgatgccgtatattgtcactcagttgaacttcgaaatatgtttggtgaaaca
cttcataaagcagtccagggttgtggagcgcacccagcgatacgaatggcaccgagtctt
acatttaaagaaaaagtaacaagccttaaatttaaagaaaaacctacagacctggagaca
agaagctataagtatcttctcttgtccatggtgaaactaattcatgcagatccaaagctc
ttgctttgtaatccaagaaaacaggggcctgaaactcaaggcagtaccgcagaattaatt
acagggctcgtccaactggtacctcagtcacacatgccagagattgctcaggaagcaatg
gaggctctgttggttcttcatcagttagatagcattgatttgtggaatcctgatgctcct
gtagaaacattttgggaaatcagctcacaaatgcttttttacatctgcaagaaattaact
agccatcaaatgcttagtagcacagaaattctcaaatggttgcgggaaattttgatctgc
aggaataaatttcttcttaaaaataagcaggcagatagaagttcctgtcactttctcttc
ctttatggagtaggatgtgatgttccttcaagtggaaataccagtcaggtgtccatagat
catgaagaattactacgtacttgtactcctggaacctctctccgaaagggaaaaggaaat
tcatccatggatagtgctgcagggtacagcggaaccccgccgatatgccgacaagcccag
accaaactagaagtggccctgtacatgtttctgtggagccctgacactgaagctgttctg
gttgccatgtcctgttttcgtcacctctgtgaggaagcggatatccggtgtggggtggat
gaagtgtcagtgcacaacttcttgcccaactataacacattcatggagtttgcctctgtc
agcaatatgatgtcaacaggaagagcagcccttcagaaaagagtgatggcattactacgg
cgaattgagcatcccaccgcaggaaacactgaggcttgggaagatacacatgcaaagtgg
gaacaagctacaaaactaatcctcaactacccaaaagccaaaatggaggatggccaggct
gctgaaagccttcacaagaccatcgttaagaggcgaatgtctcatgtgagtggaggagga
tccatagatttgtctgacacagactccctacaagaatggatcaacatgactggcttcctt
tgtgcccttgggggagtatgcctgcagcagagaagcaattctggcctggcaacctatagc
ccacccatgggcccagtcagtgaacgcaagggttccatgatttcagtgatgtcctcagag
ggaaacgcagatacacctgtcagcaaatttatggatcgattgctatccttaatggtctgt
aaccatgagaaagtgggacttcagatacggaccaatgttaaggatctggtgggtctagaa
ttgagtcctgctctttatccaatgctctttaacaaactgaagaataccatcagcaagttt
tttgactcccaagggcaggttttattgactgacaccaatactcagtttgtggagcaaacc
atagctataatgaagaacttactagataatcatactgaaggcagctctgaacatctgggg
caagctagcattgaaacaatgatgttaaatctggtcagatatgttcgtgtgcttgggaat
atggtccatgcaattcaaataaaaacgaaactgtgtcagttagtggaggtaatgatggca
aggagagacgacctctcattttgtcaagagatgaaatttaggaataagatggtagaatac
ctgacagattgggttatgggaacatcaaaccaagcagcagatgatgatgtaaaatgtctt
acaagagatttggaccaggcaagcatggaagcagtagtttcactcctggctggtcttccg
ctgcagcctgaggaaggagatggtgtggaattgatggaagccaaatcacagttatttctt
aagtatttcacattgtttatgaaccttttgaatgactgtagtgaagttgaagatgaaaat
gcacaaacaggtggcaggaaacgtggcatgtctcggaggctggcatcactgaggcactgt
acagtcctggcaatgtcaaacttactcaatgctaacgtggacagtggcctcatgcactcc
ataggtttaggttatcacaaagatcttcagacaagagctacatttatggaagttctgaca
aaaatccttcaacaaggcacagaatttgacacacttgcagaaacggtgttggcagatcgt
tttgagagactggtagagttggtcacaatgatgggtgatcaaggagagctcccaatagct
atggctctggccaatgtggtcccttgttctcagtgggatgaactagctcgagttctagtg
actctatttgactctcggcatttactctaccaactgctctggaacatgttttctaaggaa
gtagaattggcagactccatgcagactcttttccgaggcaacagcttggccagtaaaata
atgaccttctgtttcaaggtatatggtgctacctacctacagaaactcctggatccttta
ttacggattgtgatcacatcctctgattggcagcgtgttagctttgaagtagatcctacc
aggttagaacagtcagagagccttgaggaaaaccagcgaaacctccttcagatgaccgag
aagttcttccatgccatcatcagttcctcctccgagtttccccctcagctacgaagtgtg
tgccactgtttgtaccaggcaacttgccactccctactgaataaagctacagtaaaagaa
aaaaaggaaaacaaaaaatcagtggttagccagcgtttccctcagaacagcatcggtgca
gtgggaagtgccatgtttctcagatttatcaaccctgccattgtctcaccatatgaagca
gggattctagataaaaagccaccacctagaatcgaaagaggcttgaagttaatgtcaaag
gtacttcagagtattgccaatcatgtccttttcacaaaagaagagcacatgcggcctttt
aatgattttgtgaaaagcaactttgatgcagcacgaaggtttttccttgatatagcatcc
gattgtcctacaagtgatgcagtaaatcatagtctttccttcatcagtgatggcaatgtg
cttgctttacatcgtctactctggaacaatcaagagaaaattggccagtatctttccagc
aacagggatcacaaagctgttggaagacgaccttttgataagatggcaacacttcttgca
tacctgggtcctccagagcacaaacctgtggcagatacacactggtccagccttaacctt
accagttcaaagtttgaggaatttatgactaggcatcaagtacatgaaaaagaagagttc
aaagctttgaaaactttgagtattttctaccaagctgggacttccaaagctgggaatcct
atattttattatgttgcacggaggttcaaaactggtcaaatcaatggcgatttgctgata
taccacgtcttacttactttaaagccatattatgcaaagccatatgaaattgtcgtggac
cttacccatactgggcctagcaatcgctttaaaacagactttctctccaagtggtttgtt
gtttttcctggctttgcttatgataatgtctctgcagtctatatctataactgtaactcc
tgggtcagggaatacaccaagtatcacgagcggctgctgactggcctcaaaggcagcaaa
agactcattttcatagactgtcctgggaaactggccgagcacattgagcatgaacaacag
aaactacccgctgccaccttggctttagaagaggacctgaaggtattccacaatgctctc
aagctagctcacaaagacaccaaggtttctattaaagttggttctactgctgttcaagta
acctcagcagagcgaacaaaagtcctggggcagtcagtctttctaaatgatatctattat
gcttcggaaattgaagagatctgcctagtggatgagaaccagttcaccttaactattgca
aaccagggcacaccactgaccttcatgcaccaagagtgtgaagccattgttcagtctatc
attcacatccggacacgttgggagctgtcgcagcctgactccatcccccagcacaccaag
attcgcccgaaagatgtccctgggacactgctcaatatcgcattacttaatttaggcagt
tcagaccctagtttacggtcagctgcctataatcttctgtgtgccttaacttgtaccttt
aatttaaaaatcgagggccagttactagagacatcaggtttatgtatcccagccaacaac
accctatttattgtctctattagcaagacactggcagccaatgagccacacctcacctta
gaatttttggaagagtgtatttctggatttagcaaatctagtattgaattgaaacacctt
tgtttggaatacatgactccgtggctgtcaaatctagtacgtttttgtaagcacaatgat
gatgccaaaagacaaagagttactgcgattcttgataagctgataacaatgactataaac
gagaaacagatgtatccatctattcaagcaaaaatatgggggagccttgggcagattaca
gacctccttgatgttgtcctagacagtttcatcaaaaccagtgcaacgggtggcttggga
tcaataaaagctgaggtgatggcagatactgctgtagctttggcttctggaaatgtgaaa
ttggtttcaagcaaggttattggaaggatgtgcaaaataattgacaagacatgcttatct
ccaactcctactttagagcaacatctcatgtgggacgatattgctattctagcccgctac
atgctgatgctgtccttcaacaattccctggatgtggcagctcatctcccctacctcttc
cacgtcgttactttcttagtagccacagggccactctcccttagagcttccacacatgga
ttggtcattaatatcattcactctctgtgtacttgttctcagcttcattttagtgaagag
accaagcaagttttgagactcagtttgacagagttctcattacccaaattttacctgctg
tttggcattagcaaagtcaagtcagctgctgtcattgccttccgctccagctaccgggac
aggtcattctctcctggctcctatgagagggagacttttgctttgacatccttggaaaca
gtcacagaagctttgttggagatcatggaggcatgtatgagagatattccaacatgcaag
tggctggaccagtggacagaactagctcaaagatttgcattccaatataatccatccctg
caaccaagagctcttgttgtctttggctgtattagcaaacgagtgtctcatgggcagata
aagcagattatccgtattctcagcaaggcgcttgagagttgcttaaaaggacctgatact
tacaacagtcaagttctgatagaagctacagtgatagcactaaccaagttacaaccactt
cttaataaggactcccctctgcataaagccctcttttgggtagctgtggccgtgctgcag
ctcgatgaagtcaacttgtattcagcgggcaccgcacttctggaacaaaacctgcacacc
ttagacagtctccggatattcaatgacaagagtccagaggaagtgttcatggcgatccgg
aatcctctggaatggcactgcaaacaaatggatcattttgttggactcaatttcaactct
aactttaacttcgcactggttggacacctcttaaaaggatacaggcatccttcacctgcc
attgttgcaagaacagtcagaattttgcatacactactaactctggttaataaacataga
aattgtgacaaatttgaggtgaatacacagagcgtggcttacctggcagctttacttaca
gtgtctgaggaggttcgaagtcgctgtagcctaaaacatagaaagtctcttcttcttact
gatatttcaatggaaaatattcctatggatacatatcccattcatcatggtgaccctagc
tataggacactaaaggagaatcagccatggtcctctcccaaaggttctgaagggtacctt
gcagccagctatccacctgcgggccagaccagtccccgagccaggaaatccatgagtttg
gacatggggcagccttctcaggccaacacgaagaagttgcttggaacaaggaaaagtttt
gatcacttgatatcagacacaaaggctcctaaaaggcaagaaatggaatcagggatcaca
acaccccccaaaatgaggagagtagcagaaactgattatgaaatggaaactcaaaggatt
tcctcatcacaacagcacccacatttacgtaaagtttcagtgtctgaatcaaatgttctc
ttagatgaagaagtacttactgatccgaagatccaagcacttcttcttactgttctggct
acgctggtgaaatacaccacggatgagtttgatcaacgaattctttatgaatacttagca
gaagctagtgttgttttccccaaagtttttcctgttgtgcacaatttgttggactctaag
atcaacaccctgttgtcattgtgccaagatccaaatttgttaaatccaatccatgggatt
gtgcaaagtgtggtgtaccatgaagaatccccaccacagtaccaaacatcttacctgcaa
agttttggttttaatggcctatggcggtttgcaggacccttttcaaagcaaacacaaatc
ccagactatgctgagcttattgttaagtttcttgatgccttgattgacacgtatttgcct
ggaattgatgaagaaaccagtgaggagtccctcctgacacccacatctccttatcctcct
gcagtgcagagccagcttagtattactgctaaccttaacctttctaattccatgacctca
cttgcaacttcccagcattccccaggaatcgacaaggagaatgttgaactctcccctacc
actgggcactgtaacagtgggcgaactcgtcatggatccgcaagccaggtgcagaagcaa
agaagcgctggcagtttcaaacgtaatagcattaagaagatcgtgtga
DBGET
integrated database retrieval system