Phocoena sinus (vaquita): 116745989
Help
Entry
116745989 CDS
T07759
Symbol
PSMC5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03050
Proteasome
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116745989 (PSMC5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116745989 (PSMC5)
09164 Neurodegenerative disease
05010 Alzheimer disease
116745989 (PSMC5)
05012 Parkinson disease
116745989 (PSMC5)
05014 Amyotrophic lateral sclerosis
116745989 (PSMC5)
05016 Huntington disease
116745989 (PSMC5)
05017 Spinocerebellar ataxia
116745989 (PSMC5)
05020 Prion disease
116745989 (PSMC5)
05022 Pathways of neurodegeneration - multiple diseases
116745989 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psiu03051
]
116745989 (PSMC5)
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116745989 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
AAA_17
PhoH
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
DUF5906
RNA_helicase
ABC_tran
Zeta_toxin
AAA_11
AAA_19
TsaE
HR1
Prominin
Motif
Other DBs
NCBI-GeneID:
116745989
NCBI-ProteinID:
XP_032473046
Ensembl:
ENSPSNG00000017340
UniProt:
A0A8C9E6T3
LinkDB
All DBs
Position
20:44246590..44251204
Genome browser
AA seq
406 aa
AA seq
DB search
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacggaccagagcagatggagctggaagaggggaaggcaggcagtggactc
cgccagtattatctgtccaagattgaagaactccagctgattgtgaatgataagagccaa
aatctccggaggctgcaggcacagaggaatgagcttaatgcaaaagttcgcctgttgcgg
gaagagctacagctgctgcaggaacagggctcctatgtgggggaagtagtccgggccatg
gataagaagaaagtgttggttaaggtacatcctgagggcaagtttgtcgtagacgtagat
aagaacatcgacatcaatgatgtgacacccaattgccgggtggccctcagaaatgacagc
tacactctgcacaagatcctgcccaacaaggtagacccattggtgtcactgatgatggtg
gagaaggtgccagattcaacttacgagatgattggtggcctggacaagcagatcaaggag
atcaaagaagtgattgagctgcccgttaagcatcctgagctctttgaagcgctgggcatc
gcacagcccaagggagtgctgctgtacggacccccaggcactgggaagacactgttggcc
cgggctgtggctcatcatacagactgtactttcattcgtgtctctggctctgaattggtg
cagaaattcatcggggaaggggcaagaatggtgagggaactgtttgtcatggcccgagaa
cacgctccatctatcattttcatggacgaaatcgactccatcggctcctcccggctggag
ggaggctccggaggggacagtgaagtccagcgcacgatgctggagctgctcaaccagctg
gatggcttcgaggccaccaagaacatcaaggtcatcatggccaccaacaggattgacatc
ctggactcagcactgctccgcccagggcgcattgacagaaaaattgaattcccacccccc
aatgaggaggcccggctggacattttgaagatccattctcggaaaatgaacctgacccgg
gggatcaacctgagaaaaattgctgagctcatgccaggagcatcaggggctgaagtgaag
ggcgtgtgcactgaagccggcatgtacgcactgcgggagcggcgagtccacgtcacccag
gaggactttgagatggcagtagccaaggtcatgcaaaaggacagtgagaaaaacatgtcc
atcaagaagctgtggaagtga
DBGET
integrated database retrieval system
