KEGG   Phocoena sinus (vaquita): 116745994
Entry
116745994         CDS       T07759                                 
Symbol
CHMP6
Name
(RefSeq) charged multivesicular body protein 6 isoform X1
  KO
K12195  charged multivesicular body protein 6
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03250  Viral life cycle - HIV-1
psiu04144  Endocytosis
psiu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116745994 (CHMP6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116745994 (CHMP6)
  09143 Cell growth and death
   04217 Necroptosis
    116745994 (CHMP6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116745994 (CHMP6)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116745994 (CHMP6)
Membrane trafficking [BR:psiu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    116745994 (CHMP6)
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116745994 (CHMP6)
  Exosomal proteins of other body fluids (saliva and urine)
   116745994 (CHMP6)
SSDB
Motif
Pfam: Snf7 RTP
Other DBs
NCBI-GeneID: 116745994
NCBI-ProteinID: XP_032473055
Ensembl: ENSPSNG00000018270
LinkDB
Position
20:complement(47488952..47496592)
AA seq 202 aa
MGNLFGRKKQQSRVTEQDKAILQLKQQRDKLKQYQKRITQQLEREREIARQLLRDGRKER
AKLLLKKKRYREQLLDKTENQITSLETMVQSIEFTQIEMKVIEGLQFGNECLNKMHQVMS
IEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELDAITQEQIELPEVPSEPLP
EKIPEKVPVKARPRQAEVVAAS
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggcaacctgttcggccgtaagaagcagcagagccgggtcacggagcaggacaaggcc
atcctgcaactgaagcagcagcgggataagctgaagcagtaccagaagaggatcacccag
cagctggagcgggagcgggagattgcccggcagctcctgcgtgacggcaggaaggaacgg
gccaagctgctgctcaagaagaagcgataccgggagcagctcctggacaagacagaaaac
cagatcaccagcctggagaccatggtccagagtattgagttcacccagattgaaatgaag
gtgatcgaggggctgcagtttggaaatgagtgtctgaataagatgcaccaggtgatgtcc
atagaagaggtggagcggatactggacgagacgcaggaggctgtggagtaccagcggcaa
atagatgagctgttggcaggaagcttcactcaggaggacgaagatgccatcctggaggag
ctggacgcaatcactcaggaacagatagagctgccagaggttccttcagagccccttcct
gaaaagatcccagagaaagtccccgtcaaggccaggccccgacaggcggaagtggtggca
gcctcgtaa

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