Phocoena sinus (vaquita): 116746098
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Entry
116746098 CDS
T07759
Symbol
NTN1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116746098 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116746098 (NTN1)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116746098 (NTN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116746098
NCBI-ProteinID:
XP_032473232
Ensembl:
ENSPSNG00000021527
UniProt:
A0A8C9EBW0
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Position
20:complement(7528803..7714312)
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AA seq
604 aa
AA seq
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MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAF
GKDVRVSSTCGRPAGRYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCW
QSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQ
CRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDD
SLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASK
GKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQNLWIRSR
DIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgcagtgtgggaggcgctggcggcgctggcggcggtggcgtgcctggtgggc
gcggtgcgtggcgggcccgggctcagcatgttcgccggccaggcggcgcagcccgacccc
tgctcggacgagaacggccacccgcgccgctgcatcccggactttgtcaacgcggccttc
ggcaaggacgtgcgcgtgtccagcacctgcggccggcccgccgggcgctactgcgtggtg
agcgagcgcggcgaggagcggctgcgctcctgccacctctgcaacgcctcggaccccaag
aaggcgcacccgcccgccttcctcacggatctgaacaacccgcacaacctgacgtgctgg
cagtccgagaactacctgcagttcccgcacaacgtcacgctcacgctgtcgctcggcaag
aagttcgaggtgacctatgtgagcctgcagttctgctcgccacggcccgagtccatggcc
atctacaagtccatggactacgggcgcacgtgggtgcccttccagttctactccactcag
tgccgcaagatgtacaaccggccgcaccgtgcgcccatcaccaagcagaacgagcaggag
gccgtgtgcaccgactcgcacaccgacatgcgcccgctctcgggcggcctcatcgccttc
agcacgctggacgggcggccctcggcgcacgacttcgacaactcgcccgtgctgcaagac
tgggtcacggccaccgacatccgcgtggccttcagccgcctgcacacgttcggcgacgag
aacgaggacgactcagagctggcgcgcgactcgtacttctacgccgtgtccgacctgcag
gtgggcggccgctgcaagtgcaatggccacgcggcccgctgcgtgcgcgaccgcgacgac
agcttggtgtgtgactgcaggcacaacacggccggcccggagtgcgaccgctgcaagccc
tttcactacgaccggccctggcagcgcgccacagcccgcgaggccaacgagtgcgtggcc
tgtaactgcaaccttcacgcccggcgctgccgcttcaacatggagctttacaagctgtcg
gggcgcaagagcggaggcgtctgcctcaactgtcgccacaacacggccggccgccactgc
cactactgcaaggagggctactaccgcgacctgggcaagcccatcacccaccgcaaggcc
tgcaaagcctgcgattgccaccctgtgggcgccgctggcaaaacctgcaaccagaccacg
ggccagtgcccctgcaaggatggtgtgaccggcatcacctgcaaccgctgtgccaagggc
taccaacagagccgctcccccatcgccccctgcataaagatccccgtagcaccgccgacc
actgcagccagcagcgtggaggagcccgaagactgtgattcctactgcaaggcctccaaa
gggaagttgaagattaacatgaaaaagtactgcaagaaggactacgccgtccagatccac
atcctgaaggcggacaaggcaggggactggtggaagtttacggtgaacatcatctccgtg
tacaagcagggcaccagccgcatccgccgcggtgaccagaacctgtggatccgctcgcgg
gacatcgcctgcaagtgccccaaaatcaagcccctcaagaagtacctactgctgggcaac
gcggaggactcgcccgaccagagcggcatcgtggcggacaagagcagcctggtgatccag
tggcgggacacgtgggcgcggcggctgcgcaagttccagcagcgcgagaagaagggcaag
tgcaagaaggcctag
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