Phocoena sinus (vaquita): 116746106
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Entry
116746106 CDS
T07759
Symbol
SDK2
Name
(RefSeq) protein sidekick-2 isoform X1
KO
K16353
protein sidekick
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116746106 (SDK2)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
Other
116746106 (SDK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Fn3_VIN3
V-set
C2-set_2
Ig_C17orf99
Ig_RIMBP2
Fn3_SaeA_3rd
Motif
Other DBs
NCBI-GeneID:
116746106
NCBI-ProteinID:
XP_032473242
Ensembl:
ENSPSNG00000021722
LinkDB
All DBs
Position
20:53038952..53303595
Genome browser
AA seq
2077 aa
AA seq
DB search
MITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEESQKHQSVSHGEAAVIRAPR
IASFPRPQVTWFRDGRKIPPSSRIAITLENALVILSTVAPDAGRYSAQAVNDKTGDTKTS
QPVALAVENVGGPGDPIAPTIIIPPKNTSVVTGTSEVTMECVANARPLIKLHITWKKDGV
LLSSGISDYNRRLTIPNPTGSDAGYYECEAILRSSGASSVVRGAYLSVLEPPQFVKEPER
HITAEMEKVVDVPCRAKGVPPPSITWYKDSAVVEVGRLSRFRQRGDGGLQISGLVPDDTG
MFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQ
KGERILASGSVQLPRFTLLESGSLLVSPTHTSDAGTYTCLATNSRGVDEASADLVVWART
RITKPPQDQSVIKGTQASMMCGVTHDPRVTVRYVWEKDGATLSMEGNPRIRLDRNSSLHI
SQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSAAERRAINLTWAKPF
DGNSPLIRYVLEMSENNAPWTVLLASVDPEATSVMVKGLIPARSYQFRLCAVNDVGKGQF
SKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLP
VGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPG
NVHAEATNSTTIRFTWTAPSPQFINGINQGYKLMAWEPEQEEEVTMVTARPNFQDSIHVG
FVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLARTHEDVPGPVGHLSFTEILDTSLKVSWQ
EPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQ
GQVSASTISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVG
EGEEWLLIHQLPNEPDARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPP
DMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLSHVVQDRV
EREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTVMGRTRESVPSSGPTNVSVLATTSSSM
LVRWGEVPEADRNGLVLGYKVLYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQV
LAFTRIGDGSPSHPAILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQI
TYRLNATTANAATVEVLAPSARQFTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK
RDRPQPPSKPVVQQENVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSH
NASTFVVDRLKPFTSYKFRVKATNDIGDSEFSKESEPLTTLQAAPDEAPTVVSVTPHTTT
SVLIRWQPPSEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTYLNKHRRY
EIRMSVYNTAGEGPSSPPHEVFVGEAVPTAVPRNVAVHGATATQLDVTWDPPPPESQNGD
IQGYKIYFWEAQRRNLTERVKTLFLAENGVKLKNLTGYTAYMVSVAAFNAAGDGPRSTPA
RGQTQQAAPSAPSSVKFSELTTTSVNVSWEAPQFPNGVLEGYRLVYEPCTPVDGVSKIVT
VDVKGSSPLWLKVKDLAEGMTYRFRIRAKTFTYGPEIEANVTTGPGEGAPGPPGVPIIVR
YSSAIAIHWSSGDPGKGPITRYIIEARPSDEGLWDILIKDIPKEVTSYTFSMDILKPGVS
YDFRVIAVNDYGFGTPSSPSQSVPAQKANPFYEEWWFLVVIALVGLIFILLLVFVLIIRG
QSKKYAKKTDSGTNPKSGALGHGEMMSLDESSFPALELNNRRLSVKNSFCRKNGLYTRSP
PRPSPGSLHYSDEDVTKYNDLIPAESSSLTEKPSEISDSQGSDSEYEVDPSPQKAHSFVN
HYISDPTYYNSWRRQQKGISRAQAYSYTESDPGEPDPTALSNGSSAQQGSLFRPKASRTP
TPQNPPNPPSQQSTLYRPPSSLAPGSRAPIAGFSSFV
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccagcctggaccgcacccacgccggcttctaccgctgcatcgtgcgtaaccgg
atgggcgctctgctccagcggcaaaccgaggtccaggtggcctacatggggagctttgag
gagagtcagaagcaccagagcgtctcccacggagaagcggccgtcatccgcgccccacgc
atcgccagcttcccacggccgcaggtgacctggttccgggacggccgcaagatcccgccc
agcagccgcatagccatcaccctggagaacgcccttgtcatcctgtcaacggtggctccc
gacgcaggccgctattccgcacaagctgttaatgacaagaccggggataccaagaccagc
cagcccgttgctctcgccgtggagaatgtagggggccccggagaccccatcgctccaacc
atcatcattcctcccaagaacaccagcgtggtgacggggacctcggaggtgaccatggag
tgcgtggccaatgccaggcccctgatcaagctgcacatcacttggaagaaggatggggtg
ctgctgtccagcggcatcagcgactacaaccgccggctcaccatccccaaccccacgggc
agcgacgccggttactacgagtgtgaggccatccttcgcagcagcggtgcctcctctgtc
gtccgtggcgcctacctgtctgtgctggaaccgcctcagtttgtcaaggagccagagaga
cacatcacagcagagatggagaaagtggtggacgtcccctgtcgggccaaaggtgtgccg
ccaccctccatcacctggtacaaggactcggccgtggtggaggtggggaggctaagccgc
ttccggcagcgaggcgacgggggcctgcagatcagcgggctggtgcccgacgacaccggc
atgttccaatgcttcgcccgcaacgcggccggcgaggtgcagacctccacctacctggcc
gtcaccagcatcgcccccaacatcaccaggggccccctggacagcacggtgattgacggc
atgtcagtggtgctggcttgtgagacttcgggggcgccccggccggccatcacttggcag
aaaggggagcgcatcctggccagcggctcagtccagctgcctcgcttcacgctcctggaa
tccggcagcctgctcgtcagccccacgcacacctccgacgccggcacctacacctgtttg
gccaccaactctcggggggtcgatgaagcctcggccgacctggtcgtgtgggcccggacc
cgcatcaccaagcccccccaggaccagagcgtcatcaagggaacccaggcctccatgatg
tgcggagtgacccacgacccccgagtgactgtcaggtacgtctgggagaaggatggggcc
acactgagcatggagggcaacccccgcatccgtctggacagaaacagctccctgcacatc
tcgcagacgtggtccggggacatcggcacctacacctgccgggtgctctcagccggaggc
aacgactctcgcagtgcccacctgcgtgtgaggcagctgcctcacgcccctgagcaccca
gtggcgactctcagcgccgcggagagaagggccatcaacctgacgtgggccaagcccttt
gacggcaacagcccgctgatccgctacgtcctggagatgtcggagaacaatgccccctgg
acggtgcttctggccagtgtggaccccgaggccacctcggtgatggtcaagggcttgatt
cccgcacgttcctaccagttccgtctttgtgccgtaaacgacgtggggaaaggacagttc
agcaaagacacagagagggtctcccttcctgaggagccccccacggcccctccacagaat
gtcatcgccagcggccggaccaaccagtccatcatgatccagtggcagccacctcccgag
agccaccagaatggcatccttaagggctacatcatcaggtactgcctggctgggctgcct
gttgggtaccagtttaagaacatcacggacgctgatgtcaacaacctgctgctggaggac
ctcatcatctggaccaactacgagatcgaggtggccgcctacaacagcgcaggactgggt
gtctacagcagcaaagtcaccgagtggacactgcagggagtgcccacggtccctccaggc
aacgtgcatgcagaagccaccaactccacaaccatccgcttcacctggactgctcccagc
ccccagttcatcaatggcatcaaccagggctacaagctgatggcctgggaaccagagcag
gaagaggaggttaccatggtgaccgcccggcccaactttcaagacagcatccacgtgggc
tttgtgtcgggcctgaagaagttcactgagtacttcacctcggtgctgtgcttcaccacc
cccggcgacgggcctcgcagcaccccgcagctggcgcgcacccacgaggacgtgccaggg
cccgtgggacacctgagcttcactgaaatcctggacacctcgctgaaggtcagctggcaa
gaaccaggggagaagaacggcattctcacaggatatcggatctcctgggaggagtataac
cggaccaacacccgcgtgacgcactacctgcccaacgtcaccctggagtaccgcgtcacg
ggcctcaccgcgctcaccacctacaccatcgaggtggccgccatgaccgccaagggccag
ggccaggtgtccgcctcaaccatctcctccggggtgcctccagaactcccaggagccccc
accaacctgggcatttccaacattggcccccgctccgtgaccttgcagttcaggccaggt
tatgatgggaagacctccatctcccgctggctggtggaggcccaggtgggcgtggtcgga
gagggagaggagtggctgctgattcaccagctccccaacgagccggacgcccggtccatg
gaggtgcccgacctgaaccccttcacctactacagcttccgcatgcgccaggtgaatatc
gtgggcactagcccacccagccagccttccagaaagatccagaccctccaggcgccgcct
gacatggccccagccaacgtgacgctgcgcacagcgagtgagaccagcctgtggctccgg
tggatgcctctcccagagatggaatacaacgggaaccccgagtcggtgggctacaagatc
aagtacagccgggcggacggccacggcaagacgctgagccacgtggtccaagaccgcgtg
gaacgggagtacaccatcgaagacctggaggagtggacggagtaccgcgtccaggtgcag
gccttcaacgccatcgggagcgggccctggagccagacggtgatgggcaggacccgggag
tcagtgccgtcctcgggccccaccaacgtgtctgtgctggccaccacctccagcagcatg
ctggttcgctggggcgaagtcccagaggccgaccgcaacgggctggtgctgggctacaag
gtgctgtataaggagaaggactcagactcccagccccggttctggctggtggaagggaac
tcgtcacgcagcgcccagctcacaggtctgggcaaatatgtgctgtacgaggtgcaggtg
ctagccttcacgcgcatcggggacggcagccccagccatcctgccatcctggagcggacg
ctggatgacgttccgggaccacccatgggcatcctgttcccagaggtgaggaccacatcg
gtgcggctgatctggcagccccccgctgcccccaacggcatcatccttgcctaccagatc
acatacaggctcaacgccaccacggccaacgctgccacggtggaggtgctcgcgcccagc
gcccgccagtttacggccaccggcctcaagccagagtccgtctacctgttccgcatcacg
gcccagacccgcaagggctggggagaggccgccgaggccttggtggtgaccacagagaag
agagaccgcccgcagccccccagcaagcccgtggtgcagcaggagaacgtgaaggcacgc
agcgtgctgctgtcctgggagcctgggagcgacggactgtcccccgtgcgctactacacc
atccagacccgcgagctgcccagcggcaggtgggccctgcactcggcctctgtgagccac
aacgcctccaccttcgttgtggacaggctcaagcccttcacgtcctacaagtttcgagtg
aaggccaccaatgacattggggacagtgagttcagcaaggagtcggaaccactgaccacc
ctgcaggccgcccctgatgaagcgcccacagttgtctcggtgacaccgcacaccaccacc
tccgtgctgatccgatggcagccaccatcagaagacaagatcaacggcatcctgctgggc
ttccggatccggtaccgggagctgctctacgagggtctgaggggcttcacgctgcgtggc
atcaacaacccgggggccaagtgggcagagctcacctacctgaacaagcaccggcgctac
gaaatacgcatgagtgtgtacaacactgcgggcgaggggccctccagccccccacacgag
gtcttcgtcggggaggcagtgcccacggcagtgccccgcaacgtggctgtccacggcgcc
acggccacgcagctggatgtgacgtgggacccacccccgccggaaagccagaacggagac
atccagggctacaagatttatttctgggaggcccagcggcggaacctcacggagcgggtg
aagacgcttttcctggccgagaacggcgtcaaactcaagaacctgaccggctacaccgcc
tacatggtcagcgtggcagccttcaacgccgcgggggacgggcctcggagcacgccggcc
cggggccagacccagcaagcagcccccagtgctcccagctccgtcaagttcagtgagctg
accaccacctcagtgaacgtgtcctgggaggctccacagttccccaatggtgtcctggag
ggctaccggctggtgtacgagccctgcacccccgtggacggagtcagtaagatcgtgaca
gtggatgtgaagggcagcagccctctgtggctgaaggtgaaggacctggcggaggggatg
acctacaggttccgtatcagagccaagaccttcacctacgggcccgagatcgaagccaat
gtcaccacgggccccggagaaggtgcccccgggccgcccggagtgcccatcatcgtgagg
tacagctcggccattgccatccactggtccagcggagaccccggcaaaggccccatcacc
cgctacatcatagaagccagaccttcagacgaggggctctgggacatcctcatcaaagac
atccccaaggaggtgacgtcctacacgttcagcatggacatcctcaagccaggcgtgagc
tatgacttccgggtcatcgctgtcaacgactacggctttggcacccccagcagcccctcc
cagtctgtgccagcccagaaagccaaccccttctacgaggagtggtggttcttggtggtc
atcgcgctcgtcggcctcatcttcatcctgcttctggtctttgtgctcatcatccgaggc
cagagcaagaagtatgccaagaagacagactcagggaccaatcccaagtctggtgccctg
ggccatggggagatgatgagcttggacgaaagcagttttcctgccctagaactcaataac
cggcggctctcagtcaagaactccttctgccgaaagaacggcctgtataccaggtctcct
cctcgacccagcccgggcagcctccactactccgacgaggacgtcaccaagtacaacgac
ctcatcccagccgagagcagcagcctgaccgagaagccctcggaaatctctgactctcag
ggaagcgacagcgagtacgaggtcgacccgagcccccagaaggcccactcttttgtcaac
cactacatcagtgaccccacctattacaactcgtggaggcggcagcagaaggggatctcg
cgggcccaggcctacagctacacggagagcgacccgggcgagccagaccccaccgccctg
tccaacggcagcagcgcccagcagggcagcctctttcggcccaaggccagtcggacccca
acgccccaaaaccccccgaaccccccgagtcagcagagcaccctctaccgtccccccagc
agcctcgcccctggctcccgggctcctatagcaggattttcatcatttgtttga
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