Phocoena sinus (vaquita): 116746178
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Entry
116746178 CDS
T07759
Symbol
TTLL6
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin polyglutamylase TTLL6
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116746178 (TTLL6)
04812 Cytoskeleton proteins [BR:
psiu04812
]
116746178 (TTLL6)
Enzymes [BR:
psiu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
116746178 (TTLL6)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
116746178 (TTLL6)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
116746178 (TTLL6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
ATP-grasp_3
cpYpsA
Motif
Other DBs
NCBI-GeneID:
116746178
NCBI-ProteinID:
XP_032473368
Ensembl:
ENSPSNG00000017015
LinkDB
All DBs
Position
20:35611887..35647060
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AA seq
896 aa
AA seq
DB search
MGACLNPSSSGPTSVVASGTGGRAGPRRESKNRGGGPVFPQSFLQAGEMLQCLLLEGEEG
TDSEEREDSSIEDSKEIVTLAFVRENTGAQNGLQHAQEQGKKKRKKKRXLVINLSSCRYE
SVRRAAQQYGLREGGENDDWTLYWTDYSVSLGRVMEIKSYQKINHFPGTTEICRKDLLAR
NMSRMLKIFPKDFHFFPRTWCLPADWGDLQNYSRSRKNKVYICKPDSGCQGRGIFITRTV
KEIKPGEDMICQLYISKPFIIDGFKFDLRIYVLMTSCDPLRXFVYNEGLARFATTSYSRP
CPDNLDDICMHLTNYSVNKHSPNFLRDAHSGSKRKLSTFNVYMESHGYNVGQIWRDIEDI
IIKTLISAHPIIKHNYHTCFRNHTLNSACFEILGFDILLDHKLKPWLLEVNHSPSFSTDS
WLDKEVKDSLLYDTLVLINLRSCDKKKVLEEERQRARFLQQCRSRETRKEEVKGFQAVLL
EKTEKYEKENCGGFRLIYPSVNSEKYEKFFQDNNSLFQNTVASRAREVYARQLIQELRLK
QKKISFQTKDKRVEMQGESAGERVRGKCMRNWRQKQRQECKTTTSLASKQYLQPLTLVSC
TPDLLSSIRDTKKNETDDSLEQEAPREEAGPAPHKPTSARSYSSITDLRNSSLLSCSRPE
LSKPVSGIKEAKSTSAVNTVTSTVPLTSVETFPEFITQVSDTPQSLLGATMGTSSEGSSS
GMDRGASFKCKQQQMPWHLIQEKLSNNSLPTKSQSFSRSLNPRWTLLKNGTKKQHPVSEL
FAKVPLREKLSLFPAHYNPELVLSDKSQNLSLPQECCFCGRSSGEKKELDVPSLLLLQNS
HSHAVSLNDLLVVATAARLDPRPGRSHTGAARDRCIQDREAYSHCMTSGQRGCERS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtgtctcaatccttcgagcagtggacccacaagtgtggttgcgagcggtacg
ggtggcagagcggggccgagacgggagagtaaaaatcgcgggggaggacccgtgtttccc
cagagcttcctccaggcaggggagatgctccagtgcctgcttttggaaggagaggaaggg
acagactcagaagagagagaggacagttccatagaagattcaaaagaaatcgtcaccctg
gcttttgtgagagagaacactggggctcaaaatgggcttcagcatgcccaggagcaaggc
aagaagaagaggaagaaaaagagatgattggtgatcaatctatccagctgccgatatgag
agtgtgcgtagggctgcccaacagtatggccttcgagagggaggggaaaacgacgactgg
actctctactggactgactactcggtgtcgctggggcgggtgatggaaatcaaaagttac
cagaaaatcaatcacttcccagggacgactgaaatctgccgcaaggacttgctggccagg
aatatgagccgcatgttaaagatattcccaaaagatttccactttttccctaggacctgg
tgtcttcctgctgactggggagatttgcagaactacagcaggtcaagaaaaaataaggtg
tacatctgtaagccggattcgggctgccagggcagaggtatattcatcacccggacagtg
aaggaaatcaaaccaggggaggatatgatctgtcaactctatatctcaaagccctttatc
atcgacgggttcaagtttgacctacggatttacgtgctcatgacgtcctgtgaccctctc
aggnattttgtgtacaacgaaggactggcgcgcttcgccaccacctcctactcccgcccc
tgcccagacaacctggacgatatctgcatgcacctgactaattattccgttaataagcac
agtcccaatttcctccgagatgctcactctggcagcaagaggaagctctccaccttcaac
gtgtacatggagagccacggctacaacgtggggcagatctggagagatatcgaggacatc
atcatcaagacgctcatctcggctcaccccatcatcaagcataactaccacacctgcttc
cgcaatcacacactcaacagtgcctgctttgaaatcctgggcttcgacattttgctggat
cacaaactcaagccctggctgctggaggtcaaccactctccgagcttctccactgactcc
tggttggataaagaggtaaaggacagtctgctgtatgacactttggtcctgatcaacctg
agaagctgtgacaaaaagaaagtcttggaggaggagagacaacgggcgcggttcctgcag
cagtgtcgttctcgggagaccaggaaggaggaagtcaagggctttcaggccgtgcttcta
gagaaaactgagaagtatgaaaaggaaaactgtggaggcttccgcctgatttatcccagt
gtgaattcggagaagtatgagaagtttttccaggacaacaactccctcttccagaataca
gttgcttccagggctcgggaggtgtatgcccggcagctgatccaggagctgagactgaaa
cagaagaaaatatccttccaaacgaaagataagagggtggaaatgcagggggaatcagca
ggcgagcgagtgagaggcaagtgcatgcggaactggcgacagaagcaaaggcaggagtgc
aagaccaccaccagcctggcctccaaacaatacctccagccattgacattagtgtcctgc
acacccgacttgctgtcgagcatcagagacacaaagaaaaatgagacagacgacagcctc
gagcaggaggcccccagggaggaggctggccctgctccccataagcctacatctgcgagg
tcttacagctctattactgacttgaggaattcaagcctcctcagctgctccaggccagag
ctcagtaaacccgtctccggaatcaaggaagccaagtccacctctgcagtgaacacagtc
accagcactgtgcctctaacctcagtagaaaccttcccagaattcatcacccaggtctca
gacaccccccagtctctgctaggggcgaccatgggaaccagctctgagggcagtagctca
gggatggacaggggggcctccttcaaatgcaagcagcagcagatgccttggcacctcatc
caggaaaaattatcaaacaattctctgcctacaaaatcccagagcttctcaaggagtctg
aacccaaggtggactttgctaaagaatggcacgaagaagcaacatcccgtgtcagagctg
ttcgccaaggttccactgagggagaagctgtccttgttcccagctcactacaacccagag
ctggtgctgagtgacaagtcacaaaacctctccctgccccaggagtgctgcttctgcggc
cgaagctctggcgagaagaaggagctggatgtgccctccctcctcctcttgcagaattct
cacagccatgccgtttccctgaatgacctgctggtggttgccactgcagcccgactggat
ccgaggcctggcagaagccatacaggtgctgcgcgagaccggtgtatacaggatcgggaa
gcgtacagccactgcatgacctctggccaaagaggatgtgagaggagctag
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