Phocoena sinus (vaquita): 116746227
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Entry
116746227 CDS
T07759
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116746227 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116746227 (RNF43)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116746227 (RNF43)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116746227 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116746227
NCBI-ProteinID:
XP_032473410
Ensembl:
ENSPSNG00000016739
UniProt:
A0A8C9CEJ7
LinkDB
All DBs
Position
20:complement(28469754..28530085)
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AA seq
784 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKEHPMLPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYQPGCRRARAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSLSQSLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLSG
PSRSTAARPTRPGPFLPSQEPGMGPRHHRLPRGTHPRAPGEPQRLAVAQSPSAQGWGLSH
LRCTLQHPATCPMPPRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFHSSLSSDFDPLVYCSPEGERRREEAQPSMTSRPRSLDSVVPTG
ETQVSSHVHYHRHRHHHYKRRFQWHGRKSGPETGVPQSRPAIPRTQLQPELPSPDPQAAS
SSPAAPSGQLPSPQRPRALTEPAPGPADASSPSPGPSSLFHLQKSSLPVRHTQRKRRGSP
SEPSPASRPQDLAAHRVCQILPHYGPSLAYPWSPEAHPLIFGPPGLDRRLLPETPGPTYP
SSQPVWLCLTTCQPLGPYPSGEGPSKWSSGAPEGRPCPYPHCQVLPAQPGSEEEELEELC
EQAV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctacagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtactggcagcagcagtggagtctgaaaga
tcagctgagcagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtgtttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtacctgtgcaacgccagtgacgacgacaacctggag
cctggattcatcagcattgtcaagctggagagcccccagcgggccccccgcccctgcctg
tcactggccagcaaggcccggatggcgggggagcggggagccagcgccgtcctctttgac
atcacggaggatcgagctgctgctgaacagctgcagcagcccctggggctgacgtggcca
gtggtgttgatctggggtaatgatgccgagaagctgatggagtttgtgtacaagaaccga
aaggcccacgtgaggattgagctgaaggagcacccgatgttgccagattatgacgtgtgg
atcctcctgacggtggtgggcaccatctttgtggtcatcctggcctcggtgctgcgcatc
cggtgccgcccccgtcacagcagaccggatccccttcagcagcgaacagcctgggccatc
agccagctggccaccaggaggtaccagcccggctgcaggagggcccgggccgagtggcca
gactcaggtagcagctgcagttcagcccctgtgtgtgccatctgcctggaggagttctcg
gagggccaggagctacgggtcatttcctgcctccatgagttccatcgtacctgtgtggac
ccctggctgcatcagcatcgcacttgccccctctgcatgttcaacatcgtagagggagat
tccctttctcagtccctgggaccgtctagatcttaccaagaaccaggccgaagactccac
ctcattcgccagcatcccggccatgcccactaccacctgcctgctgcctacctgtcgggc
ccttcccggagcacagcggctcggcccacacggcctggtcccttcctaccatcccaagag
ccaggcatgggccctcggcaccaccgcctccccagaggcacacatccccgggctccaggc
gaaccacagcgcctggcagtggcccagagcccctccgcgcagggctgggggctgagccac
ctgcggtgcactttgcagcaccctgccacctgccccatgcccccacgccgggccaggcct
cacgacagcagcgggtctggagaaagctactgcacagaacgcagcggctacctagcagac
gggccagccagtgactccagttcagggccctgtcacggctcttcaagtgactcagtggtc
aactgcacggacatcagcctgcagggcatccacggcagcagttctaccttccacagctcc
ctgagcagtgactttgaccccctggtgtactgcagccccgaaggcgagcgccggcgggag
gaggctcagcctagcatgacctctcggccccgttctttggactcggtggtgcccacaggg
gaaacccaggtttccagccatgtccactaccaccgccaccggcaccaccactacaaaagg
cgtttccagtggcacggcaggaagtctggcccagaaactggagtcccgcagtccaggcct
gccattcctcggacacaactccagccagagctgccttcacccgatccgcaagcagccagc
tccagcccagcagccccgtcaggacagctccccagcccgcaacggcccagggccctcacc
gagccagcccccgggccagcggacgcctccagccccagccctggtcccagcagcctcttc
cacttgcagaaatccagcctccctgtgcgacacacacagaggaaacggcgggggagtccc
tcagagccctccccagcctctcgaccccaggacttggccgcacaccgagtgtgccagatc
cttccccattatggccccagcctggcatatccttggtccccagaggcccacccattgatc
ttcggacctccgggcctggacaggaggctgctaccagaaaccccaggccctacttaccca
agttcacagccggtgtggttgtgtctgactacatgccagcccctaggaccatacccatct
ggggaggggccttccaaatggagttctggcgccccagagggtaggccatgcccttaccca
cactgccaggtgctgccagcccagcctggctcagaagaggaggagctcgaggagctgtgt
gaacaggccgtgtga
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