Phocoena sinus (vaquita): 116746261
Help
Entry
116746261 CDS
T07759
Symbol
TRPV3
Name
(RefSeq) transient receptor potential cation channel subfamily V member 3 isoform X1
KO
K04972
transient receptor potential cation channel subfamily V member 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
116746261 (TRPV3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116746261 (TRPV3)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116746261 (TRPV3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Ion_trans
DUF4791
Pox_polyA_pol
Motif
Other DBs
NCBI-GeneID:
116746261
NCBI-ProteinID:
XP_032473480
Ensembl:
ENSPSNG00000018720
UniProt:
A0A8C9CRP6
LinkDB
All DBs
Position
20:11912623..11938363
Genome browser
AA seq
788 aa
AA seq
DB search
MDAHPKEIVPLMGRIATMSSGNAAILQEKRLAEITPTKSAHFFLEIEGFEPSSAVTKTSP
LIFSKPMDSNIRQCLPGSCDDMDSPHSPQDDVTETPFNPNSPSANLAQQEQRHRKKRLKR
HIFAAVSEGCVEQLLELLMELQELCEQCHSLEVPDFLMRKLTALDTGKTCLMKALLNINP
STKEIVRILLAFAEENNILDRFINAKYTEEAFEGQTALNIAIERRQGDIAAVLIEAGADV
NAHAKGVFFNPKYQHEGFYFGETPLALAACTNQPEIVELLMGNEQTDITSQDSRGNNILH
ALVTVAEDFRTQNDFVKHMYDVILLRSGNWELETMRNNDGLTPLQLAAKMGKAEILKYIL
SREIKEKRLRSLSRKFTDWAYGPVSSSLYDLTNVDTMTDNSVLKIIVYNTNIDNRHEMLT
LEPLHTLLHMKWKKFAKYMFFLSFCSYFFYNIILTFISYYHARGEEALSHPFGYKMWWLQ
LLGRMLVLIWAMCISVKEGIAIFLLRPSDMQSILSDAWFHFVFFVQAVLVILSVLLYLFA
CKEYLACLVLAMALGWANMLYYTRGFQSMGMYSVMIQKVILHDVLKFLFVYIVFLFGFGV
ALASLIEKCSKDNEDCSSYGSFSDTVLELFKLTIGLGDLKIQQNSKYPILFLFLLITYVT
LTFVLLLNMLIALMGETVENISKESERIWRLQRARTILEFEKMLPEWLRSRFQMGELCKV
AEQDFRLCLRINEVKWTEWKTHVSFLNEDPGPGRRTADFNKIQDSSRNNSKTTLNAFDEI
DEVPETSV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccacccgaaggagattgtgcctctcatgggcagaatagccactatgtccagt
gggaacgctgccatcctgcaggagaagaggctggcagagatcacccccaccaagagtgca
cacttcttcctggagatagaagggttcgagcccagctccgctgtcaccaagacctctccc
ctcatcttctccaagcccatggactccaacatccggcaatgcctccctggcagctgtgat
gacatggactccccacattctcctcaggatgacgtgacagagaccccatttaatcccaac
agtcccagtgcaaacctggcccagcaagagcagaggcatagaaagaagcggctgaagagg
cacatctttgcagctgtgtcggagggctgcgtggagcagctgctggagctgctgatggag
ctacaagagctttgcgagcagtgccacagcctggaggtgcctgacttcctcatgcgcaag
ctgacagccttggacacggggaagacctgcctgatgaaggccttgttgaacatcaacccc
agcaccaaggagattgtgcggatcctgctcgccttcgctgaggagaacaacatcctagac
aggttcatcaacgccaagtacacggaggaggccttcgaagggcagacggcgctgaacatc
gccatcgagcggcggcagggagacatcgccgcggtgctcatcgaggccggcgccgacgtc
aacgcccacgccaagggcgtcttcttcaaccccaagtaccagcacgaaggcttctacttc
ggcgagacacccctggccctggcagcctgcaccaaccaacccgagatcgtggagctgctg
atgggcaacgagcagacggacatcacctcgcaggactcacggggaaacaacatcctccat
gctctggtgacggtggctgaggacttcaggacgcagaatgacttcgtcaagcacatgtac
gacgtgatcctgctcaggagtggcaactgggagctggagaccatgcgcaacaatgacggc
ctcacgccgctgcagctggctgccaagatgggcaaggccgagatcctgaagtacatcctc
agccgtgagatcaaggagaagcggctccggagcctgtccaggaagttcaccgactgggcc
tacgggccagtgtcgtcctcgctctacgacctcaccaatgtggacaccatgaccgacaac
tcggtgctgaaaatcatcgtctacaacaccaacatcgataaccggcatgagatgctgacc
ctggagcccctgcacacgctgctgcatatgaagtggaagaagtttgccaagtacatgttc
ttcctgtccttctgctcctatttcttctacaacatcatcctgaccttcatctcctactac
cacgcccggggggaggaggccctgtcacaccccttcggatacaagatgtggtggctgcag
ctcttaggaaggatgcttgtgcttatctgggccatgtgcatttctgtgaaagagggcatc
gcgatcttcctgctgagaccctcagatatgcagtccatcctctcggatgcctggtttcac
tttgtcttttttgtccaagctgtgcttgtgatactgtctgtcctcttgtacttgtttgcc
tgcaaagagtacctcgcctgcctcgtgctggccatggccctgggctgggcgaacatgctc
tactacacgcggggattccagtccatgggcatgtacagcgtcatgatccagaaggtcatt
ttacatgatgttctgaagttcttgtttgtatatatcgtgttcttatttggatttggagta
gccctggcctcgctgatcgagaagtgttccaaagacaatgaggactgcagctcctatggc
agcttcagcgacacggtgctggaactcttcaagctcaccataggcctgggtgacctgaag
atccagcagaactccaagtaccccatcctcttcctgttcctgctcatcacctatgtcacc
ctcaccttcgtcctcctcctcaatatgctcattgccctgatgggggagactgtggagaac
atctccaaggagagtgagcgcatctggcgcctacagagagccaggacgatcttggagttc
gagaaaatgttaccagaatggctgaggagcagattccagatgggagagctgtgtaaagtg
gcagagcaagatttccgactgtgtttgcggatcaacgaggtgaagtggactgaatggaaa
actcacgtctctttcctcaatgaagatccgggacccgggagacggacagcagatttcaac
aaaatccaagattcttccaggaacaacagcaaaactaccctcaatgcatttgacgaaata
gatgaagttccggaaacctcagtgtag
DBGET
integrated database retrieval system
