Phocoena sinus (vaquita): 116746283
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Entry
116746283 CDS
T07759
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116746283 (DENND4A)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116746283 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
116746283
NCBI-ProteinID:
XP_032473533
Ensembl:
ENSPSNG00000002770
LinkDB
All DBs
Position
2:69517906..69655512
Genome browser
AA seq
1917 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVP
WDYTCIDVTPTGLSADLNNGSLVGPQIFLCYRRGRDKPPLTDLGVLYDWKERLKQGCEVI
QSTPYGRPANISGSTSSQRIYITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVD
KNLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPQEDYESFSLPESVPLFCLPMGAT
IECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYSEENLTEKQRFLLGLASSADE
KSDSSKTIHTSKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYD
PPPDVSCVDLDTNTISQTGDKKNVAWKVLPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGL
MDLAMNDYDFNSGKRLHMIDLEIQEAFLCFMASILKGYRSYLRPITQAPSETATDAASLF
ALQAFLRSRDRSHQKFYNMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGE
VRLIELDESFKSEHTVFVTPPEIPHLPNGEEPPLQYSYNGFPVLRNNLFERPEGFLQTRK
SKLPSKSSSPSSPSPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFICLPAY
VKVCHSKVRALKTAYDVLKKMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMQKA
GIDPNAITYGYYNKAVLESTWPSRSRSGYFLWTKVRNVVLGVAQFKRALKKHTHLSQTTL
SADGSDLDAVSHGSMDSGHGTHTVEQAPFNTGLIKVYASDDRSSTGGQSDLGYNSLSKDE
VRRGDTSTEDIQEEEDKKGSDSSSLSESESAKGSADCLPKLNYQSSSSIVRLSAATNSAD
KTSGESTESSSEPLLISSFEDTNETGNIHSRCFRKRHKSDNEPNLQQQISWGNRNRNLSG
GVLMGLMLNRINQEANPGDMVEKLGADARILSNVISKSTRPNSLDIGKPSLRSKRDSIEK
ESSDDDTPFDGSNCLADKVDSPVIFDLEDLDNETDGSKVGYIAPQNPKRSQRLNSSFSVK
PFEKTDVATGFDPLSLLVAETEQQQKEEEEEEEDDSKSVSTPSARRDLAEEIVMYMNNMS
SPLTSRTPSIDLQRACDDKVTTKKSPTLVKACRRSSLPPNSPGPVRLTKSKSYSKSEDRP
RDRLWSSPAFSPTCPFREESQDALTHSSPSFNLDTLLVPKLDVLRNSMFTAGKGVAEKAS
KWYSRFTMYTTSSKDQSSDRTSLSSVGAQDSESTSLTDEEVCHELEGATSCQESSATAGT
KGIDFSRTSLEGSSSLEGSLSKFALPGKSEVASSCNTSNTNIFQNYAMEVLISSCSRCRT
CDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLNIEIRDLRRPGRYFLKSSPSTENM
HFPSSFSRQTRQSCISTSASGLDTSVLSVQGNFDLNSKSKLLENTCARSIQIPADRSRAA
LSKCPVFPMARSVSTYGTLDKENNGGQKLIPTGSLPTTLQGATDSLGLEWHLPSPDPITV
PYLSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSS
EHCNKYSKIPRHCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHSQNRTLLFETQKY
PMVHLLQKGDNSFNQELLKNMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILFL
SLVALGRENIDIDAFDKEYKVAYDRLTPSQVKSTHNCDRPPSTGVMECRKTFGEPYL
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagataaggggcctcgtgttgctgactactttgttgtagcgggattaactgat
gtttcaaagcctcttgaagaagaaattcacttcaatgatgcttgtcataaagtagctaaa
ccaaaagaacctatcacagatgtttcagttattattaaatctcttggggaggaagtgcca
tgggattacacgtgtattgatgttaccccaactggactgtcagctgatctcaataatgga
agtcttgtggggccgcagattttcctttgctatagaagaggaagagataagcctccactt
acagatctgggggttttatatgactggaaagaaagattgaaacaggggtgtgaagttatc
cagagtactccttacggacgccctgcaaatattagcggcagtacctcatcacaaagaatt
tatatcacttaccgaagagcctctgaaaacatgactcagaatacgttggctgttacagac
atatgtattattatacccagtaaaggagaaagtccaccacacacattctgcaaagttgac
aagaatctcaataacagtatgtggggatcagcagtgtacttatgttataaaaaatcggtg
gcaaagactaacactatatcttacaaagctggtctaatttgtagataccctcaagaagat
tatgagtcattctcactcccagaatctgttcccctattttgtttaccaatgggtgcaact
attgaatgttggccatcaaatagcaaataccctctccctgtattttctacatttgtgtta
actggagcctcagctgaaaaggtctatggtgctgctattcagttttatgaaccatactcc
gaagagaatctcacagaaaaacagagatttcttttgggtttagcatcatcagcagatgag
aagtctgatagttccaagacaattcacactagtaaatgcatctgtcttctctctcactgg
cctttttttgatgcattcaggaagtttctgacttttctatatcgttattccatctctggg
cctcatgtccttccaattgagaagcatatttctcattttatgcataaagttccttttcca
tctcctcagagaccacggattttagttcagttatcaccacatgataatctgattctcagt
cagcctgtttcttcacctcttccgctaagcggtggcaagttttcaacactacttcagaat
ttaggccctgaaaatgctgtgacactactggtgtttgcagtaacggaacataagattctt
attcattccttacggccttcagtgcttactagtgtgacagaagcattagtgtctatgatt
ttccctttccactggccatgcccctatgttcctctctgcccactggctttagcagatgtc
ttaagtgcaccatgtccgttcatagtaggaattgattcaagatactttgatctctatgac
cctccaccagatgtcagttgtgttgacctagataccaacacaatttctcaaactggtgat
aagaaaaatgtagcctggaaggtacttccaaagaaaccatgtaaaaatctgatgaacaca
ctgaataatttgcaccagcagttggcaaaattgcagcagagaccaagagacgatggacta
atggacttagcaatgaatgattatgattttaattctggaaagaggttgcacatgatagat
ttggaaatccaggaggcatttttgtgtttcatggcctctattttaaaaggttatagatca
tacttacgaccaataacacaagccccatctgagacagccacagatgcagcctctcttttt
gccctacaagctttcttaagaagccgtgaccggtcacatcagaaattctataacatgatg
accaaaacacaaatgtttattcgcttcattgaggaatgttcttttgtcagtgataaagat
gcaagcctggcgttttttgatgattgtgtagataaagtggatatggacaagagtggtgaa
gtgcgacttatagaactggatgaatctttcaaaagtgaacatactgtttttgtaacacca
cctgagattccccatctacccaatggtgaagaaccccctttacagtacagctataatgga
tttccagttcttaggaacaatttatttgagagacctgaaggatttctacaaacccgaaag
agcaaattgccttcaaaatcaagtagtcctagtagcccttctcccatgttcagaagaaca
aaacaggaaattaaatcagcccataaaattgccaagaggtactcttccattcctcagatg
tggtctaggtgtctactgcgtcactgttacgggctgtggtttatttgtctcccagcttat
gtgaaagtatgtcattcaaaagtcagggctctgaaaacagcctatgatgtgcttaaaaaa
atgcagtcaaagaagatggatccacctgatgaggtgtgctaccgcattcttatgcagctc
tgtggacagtatgatcagccagtgcttgcagttcgagtgctgtttgaaatgcagaaagct
ggtattgaccccaatgccataacttatggttattataataaggctgttttggaaagtacc
tggccttcaaggagtcgtagtggctattttctttggacaaaagtgaggaacgttgttttg
ggagtagcacagttcaaaagagctttaaagaaacacacacatttatcacaaacaactctc
tcagcagatggcagtgacctggatgctgttagtcatggcagcatggatagtggtcatggg
acacacactgtggagcaggcaccttttaatacgggtttaatcaaagtgtatgcttctgat
gatagatctagtacaggtggccagtctgaccttggatataattcactatctaaggatgaa
gttagaagaggggatacatctactgaggacattcaagaagaagaagataagaaagggagt
gattctagttccttgtcagagagcgagagtgcaaagggaagtgctgattgtcttcctaag
ctcaattatcaaagttcttccagtatagttcgcctcagtgctgcaactaacagtgctgat
aaaacatcaggagaaagcacagaaagttcgtctgagccgctcttaatatcatcttttgag
gatacaaatgaaacaggaaacattcacagtagatgcttcagaaaaagacataaaagtgac
aatgagcctaatttgcagcagcaaatatcctggggaaatagaaaccgaaatcttagtgga
ggagtactaatgggacttatgctcaatagaattaaccaggaagcaaaccctggagatatg
gttgaaaaattaggagctgatgcaagaattctttcaaatgtaatctcaaaaagcacaaga
ccaaatagtcttgatattggaaagccatctttaagatcaaagagagacagtatagagaag
gaatctagtgatgatgatacaccttttgatggttctaattgtttggcagataaagtggat
tctcctgttatttttgacttagaagacttagacaatgaaacagatggatcaaaagtgggg
tacattgctccacaaaatcctaagaggagtcaacgcttgaatagcagcttttcagtaaaa
cctttcgaaaaaactgatgttgcaacaggatttgatcccctctctcttttggttgctgag
actgaacagcagcaaaaagaggaggaggaagaggaggaagatgatagcaaaagcgtttcg
acaccatctgctaggcgggatttagctgaagaaattgtgatgtatatgaataacatgagc
agtcctttgacaagtcgaacaccaagcattgatttacaacgggcctgtgatgataaagta
accactaagaaaagtccaacgttggtcaaggcatgcagaagatctagcctgcctcctaat
tctcctgggccagtgagacttaccaaatctaaaagttactcaaaaagcgaagacagacca
agggatagactctggtcttctccagccttctcacctacttgcccatttagagaagaatct
caagatgcattaacccattcatcaccttcatttaatttagatacactactagtacctaaa
ctagatgttctaagaaacagtatgttcactgctggaaaaggagttgcagagaaagcaagc
aaatggtattcaagattcaccatgtacaccacatcatccaaggatcaaagttctgatcgt
accagtctttcttcagtgggagcccaggattctgaatctacctctttaacagatgaagag
gtctgccacgagttggaaggagccacttcttgtcaggaaagcagtgccactgcagggact
aagggaattgatttcagcagaacaagcctggaaggttcttcctccttagaaggatccttg
tccaagtttgccttacctgggaagtcagaagtggcatcttcctgcaacacgagtaataca
aatatcttccagaactatgcaatggaggttcttatctcgagctgctctcgttgtagaacc
tgtgattgtcttgtccatgatgaggaaatcatggctggctggacagcagatgattcaaat
ctcaatacaacctgcccattttgtggcaatcttttcttgccctttctgaacatcgaaata
agagatttaagacgacctggaagatactttttgaagtcaagcccgtctacagaaaatatg
cattttccatcctccttttcaaggcagacaaggcagtcttgtatctcaacatcagcctcg
ggtcttgacacatctgttctctctgttcaagggaattttgatctaaatagcaaatcaaag
ttgctcgaaaatacatgtgcccgaagtattcagatccctgctgatagatcaagagcagct
ttgtcaaaatgtccagtatttccaatggccaggagtgttagtacttatggcaccttggat
aaggaaaacaatggaggacagaagctcattcctacaggcagcctgccaactactttacaa
ggagctacagattctttaggattagaatggcacctcccaagtccagatcctatcactgtt
ccatatcttagtcctttagtggtatggaaggaacttgaaagcttattggaaaatgaaggt
gatcatgcaataacagtggcagactttgtggaccatcatccaattgttttttggaacctg
gtgtggtattttagacgtcttgacttacccagtaatttacctggattgattctttcttct
gagcattgtaacaagtattcaaagattcctcgccactgtatgtctgaagacagtaaatat
gttttaatacaaatgttgtgggacaatatgaaattacatcaggatccaggacagccgttg
tacatcctctggaatgcccacagtcaaaatcgtactcttttgtttgagacccagaagtat
ccaatggtccatttattgcaaaaaggtgataattcatttaaccaggaactattgaaaaat
atggtaaaaagcattaaaatgaatgacgtctatggaccaatgagtcagattttagagaca
ctgaataaatgtcctcattttaaaagacagaggagtttatatagagaaatactgtttctc
tcacttgtggcactgggaagagaaaacattgatatagatgcatttgataaagaatacaag
gtggcatatgatcgtctcacacctagtcaagtcaagagtactcacaactgtgacagacca
ccaagtacaggagtgatggaatgtcgaaaaacctttggagaaccttatctttaa
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integrated database retrieval system
