Phocoena sinus (vaquita): 116746293
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Entry
116746293 CDS
T07759
Symbol
GFAP
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
116746293 (GFAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116746293 (GFAP)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116746293 (GFAP)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116746293 (GFAP)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116746293 (GFAP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
COLEC12
Motif
Other DBs
NCBI-GeneID:
116746293
NCBI-ProteinID:
XP_032473546
Ensembl:
ENSPSNG00000019637
LinkDB
All DBs
Position
20:complement(41299842..41312947)
Genome browser
AA seq
470 aa
AA seq
DB search
MERRRVTSAVRRSYVSSSEMGVGGRRLGPATRLPLARMPPALPARVDFSLAGALNSSFKE
TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELR
LRLDQLTANSARLEVERDNLAQDLGTLRQKLQDETNLRLEAENNLAAYRQEADEATLGRL
DLERKTESLEEEIRFWRKIHEEEVRELQEQLAQQQVHVEMDVAKPDLTAALREIRTQYEA
VASSNMHEAEEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQALTCDLESLRGTNE
SLERQMREQDERHAREAASYLEALARLEEEGQSLKDEMARHLQEYQDLLSVKLALDIEIA
TYRKLLEGEENRITIPVQTFSNLQIRGGKSTKEGEGHKVTRHLKSLTIQVIPIQAHQIVN
GAPAGSALETSLDTNSVTEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagacgggtcacctcagcggttcgccgctcctacgtctcctcctcagagatg
ggggtggggggccgccgcctgggtcctgccacccgcctgcccctggctcgaatgccgcct
gcactcccggcccgggtggacttctccttggccggggcgctcaactccagcttcaaggag
acccgggccagtgagcgggcggagatgatggagctcaatgaccgcttcgccagctacatc
gagaaggtgcgcttcctggaacagcagaacaaggcgctggctgctgagctgaaccagctg
cgggccaaggagcccaccaagcttgccgacgtctaccaggcggagctgcgcgagctgcgg
ctgcggcttgatcaacttaccgccaacagcgcccggctcgaggtggagagggacaatctg
gcgcaggacctgggcaccctgaggcagaagctccaggatgaaaccaacctgaggctggag
gctgagaacaacctggctgcctatcgacaggaggcagatgaagccaccctgggccgtctg
gatctggagaggaagactgagtctctggaggaggaaatccggttctggaggaagatccat
gaggaggaggtgcgggagctccaggagcagctggctcagcagcaggtccacgtggagatg
gatgtggccaagcccgacctcacagcagccctgagagagatccgtacacaatacgaggca
gtggcatccagcaacatgcatgaggcggaggagtggtaccgctccaagtttgcggacttg
acggacgccgctgcccgcaacgcggagctgctccgccaggccaagcacgaggccaacgac
taccggcgccagctgcaggccttaacctgcgacctggagtccttgcgcggcacgaacgag
tccctggagaggcagatgcgggagcaggacgagcgccacgcgcgggaggcggcgagttac
ctggaggcgctggcccgactggaagaggaggggcagagcctcaaggacgagatggcccgc
cacctgcaggagtaccaggacctgctcagcgttaaactggccctggatatcgagatagcc
acctacaggaagctgctggagggcgaagagaaccgcatcaccattcctgtgcagaccttc
tccaacctgcagatccgagggggcaaaagcaccaaagaaggggaaggtcacaaggtcaca
agacatctcaaaagcctcacaatacaggttataccaatacaggctcaccagattgtaaat
ggagcccccgccggctcagctctcgaaaccagcctggacaccaattccgtgacagaaggc
cacctcaagaggaacatcgtggtgaagaccgtggagatgcgggacggagaggtcattaag
gagtccaagcaggagcacaaggatgtgatgtga
DBGET
integrated database retrieval system
