Phocoena sinus (vaquita): 116746317
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Entry
116746317 CDS
T07759
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116746317 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116746317 (CHRNE)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116746317 (CHRNE)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116746317
NCBI-ProteinID:
XP_032473612
Ensembl:
ENSPSNG00000019422
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Position
20:complement(9609277..9617958)
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AA seq
491 aa
AA seq
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MAGTLLSALLLLQLLGRGEGKNEELRLYHHLLDDYDPGRRPVQKPEDTVTVTLKVTLTNL
ISLNEKEETLTTSVWIGIDWHDYRLNYSKGDFGGIETLRVPSELVWLPEIVLENNIDGQF
GVAYEANVLVSEGGYVSWLPPAIYRSICAVEVTYFPFDWQNCSLVFRSQTYNAEEVELVF
AVDDDGDTISNIDIDTEAYTENGEWAIDFCPGVIRRHDGGSNDGPGDTEVIYTLIIRRKP
LFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLS
VPLLGRYLIFVMVVATLIVMNCVIVLNVSCRTPTTHAMSPRLRHVLLELLPQLLGSGAPS
EVSRAASPPRRASSLGLLLRAEELILKKPRSELMFEGQRYRHRTWTAALCQTLGAAAPEI
RCCVDAVNFVAESTRDQEATGEEVSDWVRMGKALDNICFWAALVLFLVGSSLIFLGAYFN
QVPELPYPPCM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcagggacactgctcagcgccctgctcctcttgcagctgctcggcagaggtgaaggg
aagaacgaggagctgcgtctttaccaccacctcctcgacgactatgacccaggacgccga
ccagtgcagaagcctgaggacactgtcaccgtcaccctcaaagtcaccctgaccaacctc
atctcactgaatgagaaagaggaaaccctcaccaccagcgtctggattggaatcgactgg
catgattaccgactcaactacagcaagggcgattttgggggcatagaaaccctgcgggtc
ccttcagaactcgtttggctgccagagattgtgctggagaacaatatcgacggccagttc
ggtgtggcctatgaagccaacgtgctggtctcggagggcggctacgtgagctggctgccc
ccggccatctaccgaagtatctgcgccgtggaggtcacctacttccctttcgactggcag
aactgctctcttgttttccgctcgcagacgtacaatgcagaagaggtggagctcgtcttt
gccgtggacgacgatggcgacaccatcagcaacatagatatcgacactgaggcctatact
gagaacggggagtgggccatcgacttctgccccggggtgatccgccgccacgacggtggc
tctaatgatggtccaggggacactgaagtcatctacacgctcatcattcgccggaagccg
ctcttctacgttattaacatcatcgtgccttgcgtgctcatctcgggcctagtactgctc
gcctatttcctgccggcacaggccggcggccagaaatgcaccgtctccatcaacgtcctg
ctcgcccagaccgtcttcttgttcctaattgcccagaaaatcccagagacatctctgagc
gtgccgctgctgggcaggtacctcattttcgtcatggtggttgccacgctcattgtcatg
aattgcgtcatcgtgctcaacgtgtcttgtcggacgcccaccactcacgccatgtccccg
cggctgcgccacgtcttactggagctgctgccccaactcctgggctcgggcgcaccttcc
gaggtctcccgggccgcctcgcccccaaggcgggcgtcgtccttgggcctactgctccgc
gcggaggagcttatactgaaaaagccgcggagtgagctcatgtttgaggggcagaggtac
cggcacaggacctggactgctgccctctgccagactctgggcgccgccgcccccgagatc
cgctgctgtgtggatgccgtgaacttcgtggccgagagcacgcgagaccaggaggccacc
ggcgaggaggtgtccgactgggtgcgcatggggaaggccctcgacaacatctgcttctgg
gccgctctggtgctcttccttgttggctccagcctcatcttcctcggggcctacttcaac
caagtgccggaactgccctacccgccctgtatgtag
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