Phocoena sinus (vaquita): 116746356
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Entry
116746356 CDS
T07759
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04020
Calcium signaling pathway
psiu04024
cAMP signaling pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04713
Circadian entrainment
psiu04720
Long-term potentiation
psiu04724
Glutamatergic synapse
psiu05010
Alzheimer disease
psiu05014
Amyotrophic lateral sclerosis
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05030
Cocaine addiction
psiu05031
Amphetamine addiction
psiu05033
Nicotine addiction
psiu05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116746356 (GRIN2C)
04024 cAMP signaling pathway
116746356 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116746356 (GRIN2C)
04082 Neuroactive ligand signaling
116746356 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116746356 (GRIN2C)
04720 Long-term potentiation
116746356 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
116746356 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116746356 (GRIN2C)
05014 Amyotrophic lateral sclerosis
116746356 (GRIN2C)
05017 Spinocerebellar ataxia
116746356 (GRIN2C)
05020 Prion disease
116746356 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
116746356 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
116746356 (GRIN2C)
05031 Amphetamine addiction
116746356 (GRIN2C)
05033 Nicotine addiction
116746356 (GRIN2C)
05034 Alcoholism
116746356 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116746356 (GRIN2C)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
Glutamate (ionotropic)
116746356 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
DUF63
Motif
Other DBs
NCBI-GeneID:
116746356
NCBI-ProteinID:
XP_032473681
Ensembl:
ENSPSNG00000021017
LinkDB
All DBs
Position
20:52183829..52196667
Genome browser
AA seq
1222 aa
AA seq
DB search
MGGALGPVLLLTSLLGAWAGLGLGQGEQAVTVAVVFGSSGPLEAQARIRLTPQSFLDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGTARVHGIVFEDNVDTEAVAQILDFISFQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHTLFLE
SVRAVADANYVGWRLLDVLTLELGPGGTRAHTQRLLRQLDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYRRQHGTLPAPAGECRGHPGPVSPARKAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPD
PGTGSCVPNTVPCRRHGNHTFSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNG
KHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGT
VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGK
SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS
GLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYREMHTHMVKFNQRSVEDALSSLKMG
KLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFL
GDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYR
KLRHSVPNASRLDFLLAFSRGIYSCFSGVQSLASPARPPSPDLTAGSAQVSVLKMLQAAR
DIVTTAGVSSSLDRATRTIESWGGGRRAPPPPACPSPRPPTPEPSPTGCGPPGGGRTALG
RRAPQPPGRPPTPRSSLPDVSQVPGRPAWEARWPSLAGRGGRHLSASERRALPERPQSPE
RCHYSSFPRADRSGCPFLPLFPETPEPEDLPLLGPEQLARREALLRAAWARGSRPRHASL
PSSVTEAFARPSSETSRCARPACGRWTQAQSMRLPSYREACQEGLWAGAPPWPHGQHACL
HAHAHLPLCWGAVCPHLPPCVSHGPWLPGAWGPPGHRGRTLGLSTEYRDIGGLEEVSRVA
CGMHGFPRPCTWRRISSLESEV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggccctggggccggtcctgctactcacctcactcctcggtgcctgggcaggg
ctgggcctggggcagggcgagcaggctgtgacggtggccgtggtgtttggcagctcaggg
ccactggaggcccaggcccgtatccgcctcaccccccagagcttcctggacctgcccctg
gagatccagccactcaccgtgggtgtcaacaacaccaaccccagcagtcttctcacccag
atctgcgggctcctgggcactgcccgagtccacggcatcgtctttgaggacaacgtggac
actgaggccgtggcccagatcctcgacttcatctccttccagacccacgtgcctatcctc
agcatcagtgggggctctgctgtggtcctcacccccaaggagccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgttcgccgtgatcaccagcctgcacccgggccacacgctcttcctcgag
agcgtgcgcgccgtcgccgacgccaactacgtgggctggcggctgctggacgtgctgacg
ctggagctgggccccggcgggacgcgcgcccacacccagcgcctgctgcgccagctcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgccgaggcg
gcccaggccggcctggtggggcccgggcacgtgtggctggtgcccaacctggcgctgggc
agcaccgacgcgccccccgccgccttccccgtgggcctcatcagcgtcgtcaccgagagc
tggcgcctcagcctgcgccagaaagtacgcgacggcgtggccatcctggccctcggcgcc
cacggctaccggcgccagcacggcaccctgcccgccccggctggggagtgccgcggccac
cctgggcctgtcagccctgcccggaaggccttctacaggcacctactgaatgtcacctgg
gagggccgggacttctccttcagccctggtgggtacctggtccagcccaccatggtggtg
atcgccctcaaccggcaccgcctctgggagatggtggggcgctgggaccatggtgtcctc
cacatgaagtacccggtgtggcctcgctacagtgcctccctgcagcccgtggtggacagc
cggcacctgacggtggccacgctggaagagcgaccctttgtcatcgtggagagccccgac
cccggcacaggcagctgcgtgcccaacactgtgccctgccgccggcatggcaaccacacc
ttcagtggtgacacggccccctacaccaagctttgctgtaagggcttctgcatcgacatc
ctcaagaagctggccaaggtggtcaagttctcctacgacctgtacctggtgaccaatggc
aagcatggcaagagggtgcgcggcgtgtggaacggcatgatcggggaggtgtactacaag
cgggcagacatggccattggctccctcaccatcaatgaggagcgctccgagatcgtggac
ttctctgtgcccttcgtggagacgggcatcagcgtgatggtggctcgcagcaacggcacc
gtctccccctcggccttcctggagccctacagccctgccgtgtgggtaatgatgttcgtc
atgtgcctcaccgtggtggccataaccgtcttcatgttcgagtacttcagccccgtcagc
tacaaccagaacctcaccagcggcaagaagtctgggggcccgtccttcaccatcggcaag
tctgtgtggcttctctgggcactggtcttcaacaactcggtgcccatcgagaacccccgg
ggcaccaccagcaagatcatggtcctggtctgggctttcttcgctgtcatcttcctcgcc
agctacaccgccaacctggccgccttcatgattcaggagcagtacatcgacactgtgtct
ggcctcagtgacaagaagttccagcggcctcaggatcagtacccgcccttccgctttggc
accgtgcccaacggcagcacggagcggaacatccgtagcaactaccgcgaaatgcacacc
cacatggtcaagttcaaccagcgctcagtggaggacgcgcttagcagcctcaagatgggg
aagctggatgccttcatctatgatgctgctgtcctcaactacatggcgggcaaggacgag
ggctgcaagctggtcaccattggctctggcaaggtctttgccaccactggctatggcatc
gccatgcagaaggactcccactggaagcgggccatagacctggcgctcctgcagttcctg
ggggacggggagacccagaagctggagacggtgtggctctcggggatctgccagaacgag
aagaacgaggtgatgagcagcaagctggacatcgataacatggccggcgtcttctacatg
ctgctcgtggccatggggctggccctgctggtcttcgcctgggagcatctggtctaccgg
aagctgcgccactcggtgcccaacgcgtcccggctggacttcctgctggccttcagcagg
ggcatctacagctgctttagcggggtgcagagcctggccagccccgcgcggccgcccagc
ccggacctcaccgccggctcggcccaggtcagcgtgctcaagatgctgcaggcggcgcgc
gacatcgtgaccacggcgggcgtgagcagctccctggaccgcgccacgcgcaccatcgag
agctggggcggcggccgccgtgcgcccccgccgcccgcctgccccagtccgcggccgccc
acccccgagccgagccccacgggctgcgggccgccgggcgggggccgcaccgcgctgggg
cgtagggccccgcagcccccgggccgacccccgacgcccaggtcctccctacccgacgtc
tcccaggtgcctggccggccggcctgggaggcgcggtggccgtcgctggccgggcgcggc
gggcggcacctctcggcctccgagcggcgcgcgctcccggagcgccctcagtcgcccgag
cgctgtcactacagctccttccctcgggccgaccggtcagggtgccccttccttccgctc
ttcccggagacccccgagcccgaggacctgccgctgcttgggccggagcagctggcccgg
cgggaggctctcctgcgcgcggcctgggcccgaggttcgcgcccgcgccacgcttccctg
cccagctcggtgaccgaggccttcgcccggcccagctcggagacctcccggtgtgcccgc
ccggcctgcgggcgctggacgcaggcgcagtcgatgcggctgccgtcctaccgggaggcc
tgccaggaggggctgtgggcaggggcccccccctggccgcacggacagcacgcctgcctc
cacgcccatgcccacctgccgctttgctggggggctgtctgccctcacctcccaccctgt
gtcagccacggcccctggcttcctggggcttgggggcctccggggcacaggggcaggacc
ctggggctgagcacagaatacagggacattggggggctggaagaggtcagtagggtggcc
tgtgggatgcacggcttcccccgaccgtgcacatggaggcggatctccagcttggaatcg
gaagtgtga
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integrated database retrieval system
