Phocoena sinus (vaquita): 116746394
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Entry
116746394 CDS
T07759
Symbol
RAD51C
Name
(RefSeq) DNA repair protein RAD51 homolog 3 isoform X1
KO
K10870
RAD51-like protein 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03440
Homologous recombination
psiu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116746394 (RAD51C)
03460 Fanconi anemia pathway
116746394 (RAD51C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116746394 (RAD51C)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
116746394 (RAD51C)
FA (Fanconi anemia) pathway
Other FA pathway factors
116746394 (RAD51C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
HHH_5
RecA
DnaB_C
nSTAND3
AAA_18
AAA_24
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
116746394
NCBI-ProteinID:
XP_032473767
Ensembl:
ENSPSNG00000019147
LinkDB
All DBs
Position
20:28767438..28797193
Genome browser
AA seq
371 aa
AA seq
DB search
MQRDLLSLPLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKEEALETLQIIRRECL
TNKTSYSGTAESGKKCTALELLEQEHTQSFIITFCSALDNILGGGVPLTKTTEICGAPGV
GKTQLCMQLAVDVQIPECFGGVEGEAVFIDTEGSFMVDRVVDLANACIQHLQLIAGTHMG
EEHPKALQDFTLENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFR
HDLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAA
TIRLIFHWDQKRRLATLYKSPSQKDATVPFQITPQGFRDAVVATACSLQTEGSLNIRKRS
RDSEEEKESKD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggatttattgagtttgcccctatccccagcggtgagggtgaagctggtgtct
gcaggtttccagactgctgaggaactactagaggtgaaaccctccgagctcagcaaagaa
gttgggatatctaaagaggaagccttagaaacgctgcaaattataagaagagaatgtctc
acaaataaaacaagttattctggtacagctgagtcaggcaagaagtgcacagcgctggaa
cttcttgagcaggagcatacccagagtttcataattaccttctgttcagcactagataat
attcttgggggtggcgtacccttaaccaaaacaacagaaatttgtggtgcaccaggtgtt
ggaaaaacacaattatgtatgcagttggcagtagatgtgcagataccagaatgttttgga
ggagtggaaggtgaagcagtttttattgatacagaggggagttttatggttgatagagtg
gtagaccttgctaatgcctgcattcagcacctgcagcttatagcaggaacacatatggga
gaagagcacccaaaagctttgcaggatttcactcttgaaaatattctttcccatatttat
tattttcgttgtcgtgactacacagagctactggcacaagtttatctgcttccagacttc
ctttcagaacactcaaaggttcgattagtgatagtggatggtattgcttttccttttcgt
catgacctagatgacctatcccttcgtactcggttactaaatggcctagcgcagcaaatg
atcagccttgcaaataaccacagattagctgtaattttaaccaatcagatgacgacaaag
attgataaaaatcaggccttgctggttcctgcactgggggaaagttgggggcatgctgct
acaatacgactaatctttcattgggaccagaagcgaaggttggcaacattgtacaaatca
ccaagccagaaggatgctacagtaccatttcaaatcacacctcagggatttagagatgct
gttgttgctactgcatgttcattgcaaacagaaggttcattgaatatccggaagcggtca
cgggactcagaggaagaaaaggaatccaaagactag
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