Phocoena sinus (vaquita): 116746644
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Entry
116746644 CDS
T07759
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116746644 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116746644 (RAB11FIP1)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116746644 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
116746644
NCBI-ProteinID:
XP_032474047
Ensembl:
ENSPSNG00000021048
UniProt:
A0A8C9EAE9
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All DBs
Position
21:complement(29859771..29887284)
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AA seq
1237 aa
AA seq
DB search
MSLAASAGRGPGAVWSPTHVQVTVLQARGLRAKGPGGTSDAYAVIQVGKEKYATSVSERS
LGAPVWREEATFELPPLLSAEAAPAAAATLQLTVLHRALLGLDKFLGRAEVDLRELHRDH
GHRKTQWCTLKSKPGKKNKERGEIEVDIQFMRSNMTASMFDLSMKDKSRNPFGKLKDKIK
GKNKDSASDTVSAIIPSVTPSADSDDESPSKDKKKKSKLKTLFSRSNLQRAPLSQSMSVL
PTAKSDKVLLRPGDFQSQWEDEDNGEDKSSSASDVLSHKGTASVDPKQLNQIHFNPPKKE
GLSFLGGLRSKNDILSRSNVCINGNHVYVEQSEAKSETKGSSPASSPSPQGLRKKHLFSS
TENLASRPLKEPGEGGAVPSESSTKDSLKSMSLPSYRPLVSGDLRENTALATLEAAKETK
ESKKQENKKSSLLSLVTGKKDTAKGSEGESPPAAPGKEREGTPVAVRASEDQPGPVDDPV
KRSDEGTAAIVSGRGRAPNPFEDVQIPEPEADPEPKAAPAPPVPSPRAPQTRAVKPRLEV
SPEAQPAPRLPPSARSPLVFSALPSSSGQTPIPSKLGHDSEPQPFESPPGSSFSSPVAAP
ISTSTPIEHWPPADVGEASPEEPPSLPEPELEKESLTQVPSTVPCAVGSLSKQTPIPVGK
GMEDSPVGKTSADDPGQPLRTQPEARREEEELLGSPPRKQQGVIPSSVEAREVTSATALR
GGGMGSPAGKPPRREASGSAGQSRSPVGDADGGGGMSPAVKEAVPPIPVGEAVPLLDSAV
QKHEEMGPDACEGGKEIEGQVLFSKQLSREEAGEEAPVLVRGDRGDPQEVTPQGAAPGNA
WDMGHSQEGAAVAGPWPAALAARPPRPSSKGSFLRGPAHAASSGRDGPRLRSQGDDTRMA
QNQSKASDHEGLLSDPLHGLQSSCEAKPPALAHLDLTLPSIPEVASEDERGDQLEDDRGV
APVAALGGGASARAEQERAPSREAGGSAGGLCEPRPGAPRAPAPASAEQTTALAVQEPQS
PGPGDSGEAKPVGDGRPGQPPATALDSLVSGPPFSEPFPATRSFPTCAHSDTHHTSTAES
QKKAAVEGSAGKVENSGKRKPLLQAWVSPSDAQPVSAQPNAGSGSAKHRLHPVKPMNTAA
AKVALSSSGTATIISENLVNEAMMKKYKPSEPAFAYAQLTHDELIQLVLKQKETISKKEC
QVRQLEDYIDNLLVRVMEETPSILRVPSQVGKKAGKM
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcggcctcggcgggcaggggcccgggggccgtgtggtccccaacgcacgtg
caggtgacggtgctccaggctcggggcctgcgggccaagggccccgggggcacgagcgac
gcgtacgcagtgatccaggtgggcaaggagaagtacgccacctccgtgtcggagcgcagc
ctgggcgcgcccgtgtggcgggaggaggccacctttgagctaccgccgctgctgtcggct
gaggcagcgcccgccgccgccgccaccctgcagctcaccgtgctgcaccgcgcgctgctc
ggcctagacaagttcctgggccgcgccgaggtggacctgcgggagctgcaccgggaccac
ggccacaggaagacccagtggtgtaccttgaaatccaaaccggggaagaagaataaagaa
cgaggagaaattgaggttgacatccagtttatgagaagcaacatgaccgctagcatgttt
gacctttccatgaaagacaagtctcggaatcccttcgggaaactgaaggacaagatcaag
gggaagaataaggacagcgcgtcagataccgtgtcagccatcatccccagcgtgacgccc
tcggctgacagcgatgacgagtctccttcgaaagacaagaagaagaagtcaaagctcaag
accttgttttccaggtccaacctgcagagagcaccgctttcccagtccatgtctgtcctg
ccgactgcaaagtcagacaaagtgctgcttcgtcctggagactttcagtcccagtgggag
gatgaggacaatggtgaggacaagtcctcctctgcctcggacgtcttgtctcacaaggga
acggcaagtgtggatcctaagcagctgaaccagatccacttcaacccccccaagaaggaa
ggactctccttcctgggaggccttcggtctaagaatgacatcctttcccgctcgaatgtt
tgtatcaacgggaaccacgtctatgtggagcagtccgaagccaagagcgagaccaagggc
agctccccggcctcctcgccatccccccagggcctcaggaagaagcatttgttctcatct
acagaaaacctggcctctcgacctttgaaggagcctggggaaggaggtgcagtgccttcc
gagtcttccacaaaggactctctcaagtccatgtccctgccatcctaccggccgctggtc
agcggggaccttcgagagaacacggctctggcgaccttggaggctgcaaaggaaaccaaa
gagagcaagaaacaggagaacaagaagtcctctctgctctccctggtgaccgggaagaag
gacacggccaagggcagtgaaggcgaaagcccgccagccgcccccgggaaggagagggaa
ggcacgcccgtggcggttagagccagtgaggaccagccggggcctgtcgacgaccctgtg
aagagatcagacgaggggactgcggccattgtctcgggacggggcagagccccgaacccc
tttgaagacgtgcagatcccagaaccagaagctgacccagagcccaaggctgcaccagcg
ccacctgttccctcacccagggctccccagaccagagccgtgaaaccccgactggaagtg
tctccagaggctcagcccgcacccaggctccctccttccgctcgctctcctctcgtgttc
tctgctctcccttccagttctggtcagacacccatcccttctaaactggggcatgattca
gagccacagccctttgaatctcctcctggctcctctttctcctctcctgtagcggccccc
atttccacatccactcccattgaacactggcctcccgcagatgtgggtgaggccagtcct
gaagaaccgccttcgctccctgaaccagagctagaaaaggagagtttgacacaagttcca
agtactgttccttgtgctgtgggctcgctttccaaacagacacccattccagtggggaaa
gggatggaagactctccagtggggaagaccagcgctgatgacccaggacagcctctccgg
acgcagcctgaagcgaggcgagaagaagaagagcttctggggtctccccccagaaaacaa
caaggtgtcatcccttcatctgtcgaggcccgagaagtaacatccgccactgcgctcaga
ggaggcgggatgggcagccctgccgggaagcccccaaggcgggaagcctcaggctctgcg
ggtcaatctaggtctcccgtgggggatgcagatgggggtggcgggatgagtcctgcagtt
aaggaagcggtgccccccattcccgtgggcgaggcggtgcctctacttgactctgcggtg
cagaaacacgaagagatgggtccggatgcctgtgagggcggaaaggaaatcgaggggcag
gtgttgttttccaagcagctctctagggaagaggcgggggaggaggcccctgtgctggtc
cgcggggacagaggtgacccccaggaggtgacgccacaaggggctgcccctggaaatgcg
tgggacatgggacactcccaggagggcgcggctgtggctggaccctggcccgctgccctg
gcagctcgccctccccgcccgtcctccaaggggagcttcttgcggggccctgcgcatgcc
gccagctcggggagagatggtccccgtctcaggagtcagggagatgacacccggatggcg
cagaaccagagcaaagccagtgaccacgagggtctgctgtctgaccccctgcacggcctt
cagtcctcctgcgaggcaaagcccccagccctggcccatctggacttgaccctgccttcc
atccccgaagtcgcttcggaagacgagagaggagatcagcttgaagatgacagaggggtg
gccccggtggcagctctgggaggaggggcttctgcccgtgctgagcaggagagggcgccc
agcagggaggccggcgggtcagcagggggcctgtgcgagcccaggccaggagcgcccaga
gcacccgcacccgcttctgcagagcagaccacagccttggcggttcaggaaccacagtcg
ccgggccccggtgacagcggggaggcaaaaccagtgggagatgggaggccgggtcagcct
ccagccacagccctggattcccttgtgtccggcccccccttttctgagccctttcctgcc
acacgctcttttcccacctgtgcacactctgacacccaccacaccagtacagcagaatct
caaaaaaaagcagcagtcgagggctccgcgggtaaagtggaaaattctggcaagaggaag
ccgcttcttcaggcctgggtctcaccctcagacgcacagccagtctcggctcagccaaac
gctggaagcgggtcggccaagcacagacttcatcccgtgaagccgatgaacacggcagcc
gccaaggtcgctctctccagctcgggaactgccaccatcatcagtgagaacttggtcaac
gaagccatgatgaagaaatacaagccctcggaacccgcgtttgcttatgcacagctgacc
cacgacgagctgatccagcttgtcctcaaacagaaggaaacgataagcaagaaggagtgt
caggtgcgccagctggaagactacatcgacaacctgctggtcagggtcatggaggagacc
cccagcatcctccgggttccctctcaggttggcaaaaaagcaggaaaaatgtga
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