KEGG   Phocoena sinus (vaquita): 116746665
Entry
116746665         CDS       T07759                                 
Symbol
TLR3
Name
(RefSeq) toll-like receptor 3 isoform X1
  KO
K05401  toll-like receptor 3
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04217  Necroptosis
psiu04620  Toll-like receptor signaling pathway
psiu05160  Hepatitis C
psiu05161  Hepatitis B
psiu05164  Influenza A
psiu05165  Human papillomavirus infection
psiu05167  Kaposi sarcoma-associated herpesvirus infection
psiu05168  Herpes simplex virus 1 infection
psiu05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    116746665 (TLR3)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    116746665 (TLR3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05161 Hepatitis B
    116746665 (TLR3)
   05160 Hepatitis C
    116746665 (TLR3)
   05171 Coronavirus disease - COVID-19
    116746665 (TLR3)
   05164 Influenza A
    116746665 (TLR3)
   05168 Herpes simplex virus 1 infection
    116746665 (TLR3)
   05167 Kaposi sarcoma-associated herpesvirus infection
    116746665 (TLR3)
   05165 Human papillomavirus infection
    116746665 (TLR3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:psiu04054]
    116746665 (TLR3)
   04090 CD molecules [BR:psiu04090]
    116746665 (TLR3)
Pattern recognition receptors [BR:psiu04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   116746665 (TLR3)
CD molecules [BR:psiu04090]
 Proteins
  116746665 (TLR3)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 Tlr3_TMD LRR_1 TIR LRR_9 TIR_2 LRRNT
Other DBs
NCBI-GeneID: 116746665
NCBI-ProteinID: XP_032474101
Ensembl: ENSPSNG00000021656
LinkDB
Position
21:14405268..14424123
AA seq 930 aa
MITILTSQKSLCLFPFSLILPDIWIMSRDLLYRIYSFWGLLPFWILCTSSTNKCTVRHEI
ADCSHLKLTQIPDDLPTNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPEL
CQSLPLLEILNLQHNELSQLSDKTFIFCMNLTELHLMSNSIQKIQSNPFKRLKNLIKLDL
AHNGLSSTKLGTQLQLENLQELLLSNNKISALRREELDFLGNSSLKRLELSSNQIKEFSP
GCFHAIGKLFGFSLNNAKLSPSLIEELCLELSNTSIQNLSLSNNQLYTTSNTTFVGLKQT
NLTMLDLSHNSLSVIGNDSFAWLPRLEYLFLEYNNIQHLSSRSFYGLSNLRYLNLRRSFT
KQSISLASLPKIDDFSFQWLKFLEYLNMEDNTFPGIKSNTFTGLTRLRCLSLSNSFSSLR
TLTNETFLSLAGSPLLILNLTKNKISKIESGAFSWLGHLNVLDLGLNEIGQELTGQEWRG
LENIVEIYLSYNKYLELTSNSFALVPSLQRLMLRRVALKNVNSSPSPFHPLLNLTILDLS
NNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPIHFLKGLSHLHILNLESNGF
DEVPAEVFKDLRELKSIDLGLNNLNILPPSVFDNQVSLKSLSLQKNLITSVEKNVFRPAF
KNLSNLDMSFNPFDCTCESIAWFVTWINNTHTNISELSNRYLCNTPPQYHGFPVMLFDIS
PCKDSAPFELLFMINTSILLIFILIVLLIHFEGWKISFYWNVSVHRVLGFKEIDRQPEQF
EYAAYIIHAYKDRDWVWEHFSPMEEEDHTLRFCLEERDFKAGVLELEAIVNSIRRSRKII
FVITQNLLKDPLCKRFKVHHAVQQAVEQSLDSIILIFLEDIPDYKLNHALCLRRGMFKSH
CILNWPVQKERVNAFHHKLQVALGSRNSVH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgatcacaattctgacgtctcagaagagtctgtgtctttttcctttttcactcatcctg
cctgacatttggatcatgagcagggatttgctttatcgtatctactccttttggggactg
ttgcccttctggatactgtgtacatcttctaccaacaaatgtactgttagacatgagata
gctgactgcagtcatctgaagttgactcaaatacctgatgacctcccaacaaacataaca
gtgttgaatcttacccataatcaactcagaagattaccacctgccaattttacaagatat
agccaacttactatcttggatggaggatttaactccatctcaaagctggagccagaactg
tgccaaagtctccctttgttggaaattttgaacctccaacacaatgagctatctcagctt
tctgataaaacctttatcttctgcatgaatttgactgaactccatctaatgtccaactca
atccagaaaattcaaagtaatccctttaaacgcctgaagaatttaatcaaattagaccta
gctcataatggtttatcatctactaaattaggaactcagctgcaactggaaaacctccaa
gagcttctactatcaaataataaaatttctgcactaagacgtgaagaacttgatttcctt
ggcaactcttctttaaaaagattagagttgtcatcaaatcaaataaaagagttctctcca
gggtgttttcatgcgattggaaaattatttggcttctctctgaacaatgccaaactgagc
cccagtctcatagaagagctctgcttggaattatcaaacacaagcattcagaatctgtcc
ctgagcaacaaccagctgtacacaaccagcaacacgacttttgttggactgaagcagaca
aatctcacaatgctcgatctttcccataacagcttaagtgtgattggtaatgattccttt
gcttggcttccacgtctagaatatctctttttggagtataataatatacaacatctgtct
tctcgctctttttatgggctttccaatttgagatacctgaatttgagacgatcttttact
aaacaaagcatttccctggcttcacttcccaagattgatgatttttcctttcagtggcta
aaatttttggagtatctcaatatggaagataacacctttccaggcataaaaagcaatact
ttcacgggattgacaaggctgagatgtttaagtctgtccaactccttctcaagtttgcga
actttaacaaatgaaacgtttttatcacttgctggttctcctctgctcatactcaaccta
accaaaaataaaatctcaaaaatagagagtggtgctttttcgtggttgggccacctcaat
gtacttgaccttggccttaatgaaattgggcaagaactcacaggccaggaatggagaggt
ctagaaaatattgttgaaatctacctttcctacaacaaatacctagagctgactagcaac
tcttttgccttggttccaagccttcaacgactgatgctccgaagggtggcccttaaaaat
gtgaatagctccccttcaccttttcaccctcttcttaacctgaccatcctggatctaagc
aacaacaacatagccaacataaatgatgaactgttgaagggtcttgagaaactagaaatt
ctggatttgcagcataacaacttagctcgcctctggaagcatgcaaaccctggcggtcct
attcattttctgaagggtctttctcacctccacatccttaacttagagtctaatggcttt
gatgaggtcccagcagaagtcttcaaggacttacgtgaattgaagagcatcgatttagga
ttgaataatttaaatatccttccgccatctgtctttgataatcaagtgtcgctaaagtca
ttaagccttcagaagaatctcataacatctgttgaaaagaacgttttcaggccagcattc
aagaacctgagtaatttagatatgagctttaatccattcgattgtacatgtgaaagcatt
gcctggtttgttacttggattaataatacccataccaacatctctgaactatcaaaccgt
tacctctgcaacactccacctcaatatcatggtttcccagtgatgctttttgatatatca
ccctgcaaagacagtgccccatttgaactccttttcatgataaataccagtatcctattg
atttttatccttattgtactcctcatccattttgaaggctggaagatatctttttattgg
aatgtttcagtgcatcgagttcttggtttcaaagaaatagacagacagccagaacagttt
gaatatgcggcatatataattcatgcctataaggatagggattgggtctgggaacacttc
tcccccatggaagaagaagatcatacactcagattttgtctggaagaaagggattttaag
gcaggtgtccttgaacttgaagcaattgttaacagcatcagaaggagcagaaaaattatt
tttgttataacacagaatctactgaaagatccattatgcaaaaggttcaaggtgcaccac
gcagttcagcaagctgttgaacaaagtctggattccatcatattgatctttctcgaggat
attccggattataaactgaatcatgcgctctgtttgcgaagagggatgtttaaatctcac
tgcatcttgaactggccggttcagaaagaacgggtaaatgcctttcatcataaattgcaa
gtagcacttggttccagaaattcagtacattaa

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