Phocoena sinus (vaquita): 116746709
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Entry
116746709 CDS
T07759
Symbol
TRAPPC11
Name
(RefSeq) trafficking protein particle complex subunit 11 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116746709 (TRAPPC11)
Membrane trafficking [BR:
psiu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116746709 (TRAPPC11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Prefoldin
Motif
Other DBs
NCBI-GeneID:
116746709
NCBI-ProteinID:
XP_032474198
Ensembl:
ENSPSNG00000019989
LinkDB
All DBs
Position
21:12493688..12537859
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AA seq
1143 aa
AA seq
DB search
MSPTQWDFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCANRRADRVPISFKVLPGDH
EYPKCRPKRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYELDWDEPQWKEKQSECATR
VEIVRQSLQGRNTKVAVVLIQKKTPLPPGEDVIASERAAALCNACELSGKSLFVLPHTDH
LVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQDT
QNALKNYRTAYNLVHELRAHETNILEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHID
LCKKKIGSAELSFEHAAWMSKQFQAFGDLFDEAIKLGLTAIQTQNPGFYYQQAAYYAQER
KQLTKTLCNHEASVAHPSPDPLETQTGVLDFYGQRPWRQGILSFDLSDPEKEKVGILAIQ
LKERSVVHSEIIITLLSNAVAQFKKYKCPRMKSHLMVQMGEEYYYAKDYTKALRLLDYVM
CDYRSEGWWTLLTSILTTALKCSYLMAQLKDYITYSLELLGRASTLKDDQKSRIEKNLIN
VLMNESPAPEPDCDILAVKTAQKLWADRISLAGSNLFTIGVQDFVPFVQCKAKFHAPSFH
VDVPVQFDIYLKADCPHPIRFSKLCVSFNNQEYNQFCVIEEASKTSDVLENLTQGKMCLV
PGKTRKFLFKFVAKTEDVGKKIEITSLDLVLGSEAGRCVILNWQGGGGDAASTQEALQAA
RSFKRRPRLPDSELHWDSIVIQASTMIISRVPNISVHLRHDPPALTNEMYCLVVTVQSHE
KTCIRDVKLTAGLKPGQDANLTQKTHVTLHGTEPCDESYPALLTDIPVGDLHPGEQLEKM
LYVRCGTVGSRMFLVYVSYLINTTIEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFE
HLERVYADIPFLLMTDLLSASPWALTIVSSELQLAPSMTPVDQLESQVDNVVLRTSESAS
ECFCLRCPSVGNVEGGVATGHYIISWKRTSAMDDIPVISTVITLPHVIVENIPLHVNADL
PSFGRVRESLPVKYHLQNKTDLVQDVEISVEPSDAFMFSGLKQIRLRILPGTEQEMLYNF
YPLMAGYQQLPSLNVNLLRFPNFTNQLLRRFIPTSIFVKVRLRHFLLFKFTVLKTNKRRC
FFM
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagccccacacaatgggacttccctgtggaattatgttgtcggcctatggcttttgtt
actctcacaggcctggatgtggtttataatgctgtccatcgagctgtctgggatgctttc
tgtgccaatcggagggctgatcgggtaccgatttctttcaaggtgctcccaggtgaccat
gagtatcccaaatgtagacccaagagaacttcgtatgaatggtacattcccaaagggatc
ttgaagacaggctggatgaataaacatctgaatctggtgccagccctggtggttgtgttc
tacgaactagactgggatgagccccagtggaaagaaaagcagtctgagtgcgcgaccaga
gtggaaatagttaggcagagtttacaagggagaaacacaaaagttgcagtggttctgatt
cagaagaaaacccctttgcccccaggagaagatgtcattgcttcagaaagagctgcagcc
ttgtgcaatgcgtgtgaactctcggggaagtctttgtttgtactgccccatacagaccac
cttgtgggctatattataagattagaaaacgccttttatgaacatgcacagacttattac
tacactgagattagaagagtgaaatctcataaagaatttttgaataaaacaacacaccag
cttttatttgttagacatcagttcaaaatagctttcttcagtgagttgaaacaagataca
caaaatgctctgaagaattacaggaccgcctataatcttgtacatgaattgagagcccat
gaaactaatattctggaaattaagaccatggcaggatttataaactacaagatctgtagg
ctgtgttttcagcacaacaccccactggacgcaattgctcagttccgaaagcacatcgac
ttgtgtaagaaaaaaatcggaagtgcagagttgtcttttgagcacgctgcatggatgtct
aaacaattccaggcctttggagatttatttgatgaagctatcaagttggggttgacagct
attcaaactcagaatcctggtttctattaccagcaggcagcatactatgcccaggagcgg
aaacagcttacgaaaaccctctgtaaccatgaagcttctgtagcgcaccccagtcctgat
cccctagaaacacagacaggagttcttgacttctacggacagcgaccgtggcgacaagga
atcctaagttttgatctttctgatcctgaaaaggagaaggtggggattcttgccattcag
ctgaaggagagaagtgttgttcactctgaaataataataactcttctgagcaatgctgtt
gcacagtttaagaagtataagtgtccaagaatgaaaagtcatctgatggttcaaatggga
gaggaatattattatgcaaaggattataccaaagctttgaggttgctggattatgtgatg
tgtgattatcggagtgaaggatggtggaccctgctcacgtctatactgaccacagctctg
aagtgttcctacctcatggcccaactgaaagattacatcacttattccctagaacttctt
ggaagagcttcaactctgaaagatgaccagaaatctcggatagaaaagaacctcataaac
gttttaatgaatgaaagtcctgctcctgaacctgactgtgacatattagctgtgaaaact
gctcagaagctgtgggcggaccgaatttctctggccggcagcaatcttttcacaataggc
gtacaggactttgtgccatttgtgcaatgcaaagccaagttccacgccccaagttttcat
gtcgacgttcccgtgcagttcgatatttatctgaaggctgactgcccacatcccattagg
ttttctaagctctgtgtcagctttaataatcaggaatacaaccagttctgtgtaatcgaa
gaagcatccaagacgagtgacgttttagaaaatttgactcagggaaagatgtgcttagtt
cctggtaaaacaagaaagtttttatttaaatttgtggcaaaaactgaagatgtgggaaag
aaaattgagatcacatccttggatctggttctgggcagcgaggcaggaagatgcgtgatc
ttgaattggcaggggggaggaggagatgccgcttccacccaggaagccttacaggctgcc
cgttctttcaaaagaaggcccaggctccccgacagcgagcttcactgggacagcatagtg
atccaggcgagcaccatgatcatttccagagttccaaacatttctgtccatctgcgacat
gaccctcctgccctgactaacgaaatgtactgtttggttgtgactgtgcaatcccatgag
aagacctgcatcagagacgtgaagctcactgctggtttaaaacccggacaggatgccaac
ttaactcagaaaactcatgtgactcttcatggaacagaaccgtgtgatgagtcctacccg
gctctactcacggacattcctgtcggagacctacatcccggggagcagctggaaaaaatg
ttatatgttcgctgtggaacagtgggctcaagaatgtttcttgtgtatgtttcttacctg
atcaatacaactattgaagaaaaagaaattgtttgcaagtgtcacaaggatgaaactgta
acaatagaaaccgtctttccatttgacgttgcagttaaatttgtttctacaaagtttgag
cacctagaaagggtttatgccgacatccccttcctgctgatgacggacctgttgagtgcc
tcgccctgggccctcaccatcgtctccagtgagctgcagcttgctccttccatgacgccc
gtggaccagctggagtcccaggtggacaacgttgtcttacggacttcagagagtgccagt
gaatgcttttgtcttcgttgcccatctgttggaaatgttgaaggtggagtagcaactggg
cattatattatctcctggaagaggacttcagccatggacgacatccctgtcatcagcacg
gtcatcactctgccacacgtgattgtagaaaatatccctctccatgtgaacgcagatctg
ccatcattcgggcgtgttagagagtcgttaccagtcaagtatcacctccagaataagact
gacttagttcaagatgtggagatttctgtggagcccagtgatgccttcatgttctcaggt
cttaaacagattcgattacgtatcctccctggcaccgaacaggaaatgttgtataatttc
taccctctgatggccgggtatcagcagctgccatctctcaacgtcaacttgctcaggttc
cccaacttcacaaatcaactgctcaggcgttttatacccaccagtatttttgtaaaggtg
aggcttagacattttctgctttttaaattcactgtcttgaaaactaacaaaagaagatgt
tttttcatgtaa
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integrated database retrieval system
