Phocoena sinus (vaquita): 116746891
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Entry
116746891 CDS
T07759
Symbol
SPTB
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, erythrocytic
KO
K27409
spectrin beta, erythrocytic
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116746891 (SPTB)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116746891 (SPTB)
Intermediate filaments
Intermediate filament-binding proteins
116746891 (SPTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Tnp_22_trimer
PH_11
Motif
Other DBs
NCBI-GeneID:
116746891
NCBI-ProteinID:
XP_032474551
Ensembl:
ENSPSNG00000015592
LinkDB
All DBs
Position
2:complement(141285050..141410030)
Genome browser
AA seq
2330 aa
AA seq
DB search
MTSATEVENVGNQPPYSRINARWDAPDDELDNDNSSARLFERSRIKALADEREVVQKKTF
TKWVNSHLARVSCRITDLYKDLRDGRMLIRLLEVLSGEMLPKPTKGKMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDV
AERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIET
EKMIEKYSGLASDLLTWIEQTITVLNSRKFANSLTGVQQQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYRRELALREELIRQEKL
EQLARRFDRKAAMRETWLNENQRLVAQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVRA
LEDLAQELERENYHDQKRITARKDNVLRLWNYLQELLQSRRQRLEKTLALQKLFQDMLHS
IDWMDEIKAHLLSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITTATLQFAEEPGY
QPCDPQVIQDRVSHLEQCFEELSNTAAGRKAQLEQSKRLWKFFWEMDETESWIKEKEQIY
SSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLDQTFQEAEGMVARKEFGHPQIEAQIKE
VSAQWNQLKELAAFRKKNLQDAENFFQFQGDADDLKAWLQDAHRLLSGDVGQDEGATQAL
GKKHKDFLEELEENRVVLEHLEKQAKGFPQEFRDSPDVTNRLQALRDLHVQVVAQADMRR
QRLQDALDLYTVFGETDACELWMGEKGKWLAQMDIPDTLEDLEVVQHRFDILDQEMKTLM
AQIDGVNLAANSLLESSHPRSGEVKKCQDHLNTRWQEFQTMVLERREAVDSALRVHSYCV
DCEETSKWVMDKTKVVESTKDLGRDLTGVIAIQRKLSGLERDVAAIMTRVGALRQESQQL
MESHPELKKDIGQRQAYVEELWQALQEALKSQEASLGEASPLQAFLQELDAFQAWLSTAQ
KDVASKDMPESLPEAEQLLQQHAAIKDDIDRHQNSYQQVKASGEKVIHGQTDPEYLLLGQ
RLDGLDKGWDALHRMWESRSHALCPVPRFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLE
AAEARIRKFEEFLVSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNDE
KAQEASVLLRDNLELQNFLQNCKELTLWINDKLLTSQDVSYDEARNLHNKWLKHQAFVAE
LASHQGWLENIDAEGKQLMEEKPQFAALVSQRLEALHRLWDELQATTQETTQHLSAARSS
DLRSQTQADLNKWIRAMEDQLRSDDLGKDLTSVNRMLAKLKRVEDQVNVRKVELEELFAQ
MPSLGEEAGHEDLSIEKRFLDLLEPLGRRKKQLESSRARLQISRDLEDETLWVEERLPLA
QSTDHGTNLQTVQLFMKKNQTLQNEILGHAPRVEDVLHRGQQLVAAAEIDCRDVEECLGH
LQVSWDTLRETAARRLQRLRDASEAQQYYLDAGEAEAWISEQEFYVFSDETPQDEEGAIV
MLKRHLRQQRTVEEYGRSIKQLAGRAQSLLSSGHPEGEQIIRLQGQVDKQYAGLKDMAEE
RRRKLENMYHLFQLKREVEDLEQWITEKELVASSPEMGQDFDHVTLLRDKFRDFARETGA
TGQERVDNVNAIIERLIDVGHAEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLQR
YFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATR
LQTAYAGEKADTIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFRFFSMVRDLLSWMDS
IIRQIETQEKPRDVSSVELLMKYHKGILAEMETRSKNFSACLELGESLLQRQHQASDEIR
EKLQQVVSRRKEMKEKWKARQEQLHMWLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTV
DSVEKLIKRHEAFEKSTAGWAERFAALEKPTTLELKEHQTLERTDEETGPQEEEGETAGE
APRGPHRAATERTSPGEEERQWPQDLQPPLPPGPHKEGQEEKSSTDEKPTTEPLFKVLDT
PLSEGEEPTTLPAQVDHGHSVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSELTFY
KDAKNLALGVPYHGEEPLALRHAICEIAASYKKKKHVFKLRLSNGSEWLFHGKDEEEMLS
WLQGVSTAINESQSIRVKAQSLPLPSITGPDASLGKKDKEKRFSFFPKKK
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggccacggaggttgaaaacgtgggcaaccagccaccgtacagccggatcaat
gcgcgctgggatgccccggacgatgagctggataatgacaacagctcagccaggctcttt
gagaggtcccggatcaaggccttggcagatgagcgggaagtcgttcagaagaaaaccttc
acaaaatgggtgaactcgcacctggcgcgcgtgtcctgccgcatcactgacctctacaag
gacctgcgggatgggaggatgctcatcaggctgttggaagtgctctctggagagatgctg
ccaaagcccacgaaggggaagatgcgcatccactgcctggagaatgtggacaaggccctg
cagttcctgaaggagcagcgtgtgcacctggagaacatgggctcccacgacatcgtggac
ggcaaccaccgcctggtcctgggcctcatctggaccatcatcctccgcttccagattcag
gacatcgttgtccaaactcaggaaggtcgtgagacacgctcagccaaggacgcattgctg
ttatggtgtcagatgaagacggcaggctacccccatgtcaatgtcaccaacttcacctcc
agctggaaggatggcctagcctttaacgccctgatccacaagcaccggcccgacctgatt
gattttgataagctgaaggactccaacgcccggcacaacctggagcacgcgttcgacgtg
gctgagcgacagctgggcatcatcccgctcctcgaccctgaagatgtcttcacagaaaac
cctgacgagaaatccatcatcacctacgtggtggcgttttaccactacttctccaagatg
aaggtgctggcagtggagggcaagcgcgttggcaaggtaattgaccacgccattgagacc
gagaagatgattgaaaagtacagcgggctggcctcagacctgctcacctggatcgagcag
accatcactgtcctgaacagccgcaagttcgccaactccctgaccggtgtccagcagcag
ctgcaggccttcagtacctaccgcaccgtggagaagccgcccaagtttcaggagaagggg
aatctagaagtcctactttttaccatccagtcacggatgagagccaacaatcagaaagtg
tacacgccccatgatgggaaactcgtgtccgacatcaaccgggcctgggaaagcctggag
gaagctgagtaccggcgggagctggctctgagggaggagctcatccggcaggagaagcta
gagcagttggcccggcgctttgaccgaaaggctgccatgagagagacgtggctcaatgaa
aaccagcggcttgtggcccaggataatttcgggtacgacctggcagctgtggaggccgcc
aagaagaagcatgaggccattgagacagacacagctgcctacgaggagcgggtgagggcc
ctggaggacctggcccaggagctggagcgggagaattaccacgaccagaagcgcatcacg
gcccgcaaggacaacgtcctgcgcctgtggaactacctgcaggagctgctgcagtcccgg
cgccagaggcttgagaagacgctggccctgcagaagctcttccaggacatgctgcacagc
atcgactggatggacgagatcaaggctcacctcttgtctgccgagttcgggaagcacttg
ttggaggtcgaggacttgctccaaaaacacaagttgatggaggctgacatcgccatccaa
ggggacaaagtgaaggcgatcaccacagccactcttcagttcgctgaggagccagggtac
cagccttgcgacccccaggtcatccaggaccgtgtcagccacctggagcagtgcttcgag
gagctgagcaacacggcagccggacgcaaggcccagctggagcagtccaagcggctctgg
aagttcttctgggagatggatgagaccgagagctggatcaaagagaaggagcagatttac
tcctccctggactatggcaaggacctgaccagtgtgctcatcctacagcgcaagcacaag
gccttcgaggatgagctgcgcgggctggacgcccacctggaccagaccttccaggaggct
gagggcatggttgcacgcaaggagtttgggcacccgcagatcgaggcccagatcaaggag
gtgtctgcccagtggaaccagctgaaggagctggctgccttccgcaagaagaacctccag
gacgctgagaacttctttcagttccagggcgatgcggacgatctgaaggcctggctgcaa
gacgcccaccggctgctctcgggagatgtggggcaggatgaaggggccacacaggccctg
ggcaagaagcacaaggactttctggaggagctagaggagaaccgcgtggtgttggagcat
ctggaaaagcaggccaaggggttcccccaagagtttcgggattccccagatgtgaccaac
cggctgcaggccctccgggatctccacgtgcaggtggtggcccaagcggacatgcgtcgg
cagaggctgcaggatgccctggacctgtacacggtgtttggggagacggatgcctgtgaa
ctgtggatgggcgagaaggggaagtggctggcccagatggacatcccagacacgctggag
gacctggaggtcgtgcagcacaggtttgatatactggaccaggagatgaagactttgatg
gctcagattgatggcgtgaaccttgctgccaacagcctgttagagagtagccacccacgc
agtggggaagtgaagaagtgccaggaccatctgaataccaggtggcaggaattccagacc
atggtgttggaacggcgggaggctgtggactcggccctccgggtgcacagctactgtgtg
gattgcgaggagaccagcaagtgggtgatggacaagacaaaggtggtggagtccacaaag
gacctgggccgggacctgacaggcgtcatcgccatccagcgcaagctgtcggggctggag
cgtgacgtggccgccatcatgacccgcgtgggtgccctgcggcaggagtcccagcagctg
atggagtcacaccctgagctgaagaaggacattggccagcggcaggcgtatgtggaggag
ctgtggcaggccctgcaggaagccctgaagagccaggaggcctcgctgggggaagccagc
cctctgcaggccttcctgcaggaactggatgccttccaggcctggctgtccacggcccag
aaggacgtggcctccaaggacatgcctgagtccctcccagaggccgagcagctcctgcag
cagcatgcggccatcaaggacgacattgacaggcaccagaatagctaccagcaggtcaag
gcatccggagagaaggtgatccatggccagacggacccagagtacctgctcctgggccag
cggctggatggcctggataagggctgggatgccctgcaccgcatgtgggagagccgcagc
catgccctctgcccagtgcctcgcttccaggagttccagaaggacgccaagcaggctgaa
gccatcctcagcaaccaggaatatactctggctcacttggagcccccagactccctagaa
gctgcagaggccaggatccggaagtttgaggaattcttggtgtctatggagaacaaccgg
gataaggttttgagtcctgtggactctggaaacaagctggtagctgaaggaaacctctac
tcagacaagatcaaggagaaggtgcagctgattgaggacaggcacaggaaaaatgacgag
aaggcccaggaggcctcagtccttctgagagacaacctggagctccagaacttcctgcag
aactgcaaggagctcactctctggatcaatgacaagctgctgacatcccaggatgtctcc
tatgatgaagctcgaaaccttcacaacaaatggctgaagcaccaggcgttcgtggcagag
ctggcttcccaccaggggtggctagagaacattgatgcagaaggaaagcagctgatggag
gagaagccccagtttgcggccctggtgtcccagaggctggaagccttgcaccggctctgg
gatgagcttcaggccaccacacaggagacgacccagcacctctcagccgccaggagctct
gacctgcgttcgcagacccaggccgacctcaacaagtggatcagggccatggaggaccag
ctgcggtcggacgacctgggcaaggacctgaccagcgtcaacaggatgctggctaagctg
aagcgtgtggaggaccaagtgaacgtgcggaaggtggaactggaggagctgtttgcccag
atgccctcgctgggagaggaggcggggcatgaagacttgagcatcgagaagcggttcctg
gaccttctggagcccttggggaggaggaagaagcagctggaatcatccagagccaggctg
cagatcagccgggacttagaggatgagacgctctgggtggaggagaggctgcctctggcc
cagtcgaccgaccatggcacgaacctgcaaactgtgcagctgttcatgaagaagaaccag
acgctgcagaacgagatcctgggccacgcgccgcgggtggaggatgtgctgcacaggggg
cagcagctggtggccgcggccgagatcgactgccgagacgtggaggagtgcctggggcat
ctgcaggtctcgtgggacacactgcgggagacggcggccaggcggctgcagcgcctgcgg
gacgccagcgaggcgcagcagtactacctggacgcgggcgaggccgaggcctggatcagt
gagcaggagttctacgtcttctccgacgagaccccccaggatgaagagggcgccatcgtg
atgttgaagcggcacttacggcagcaacgcactgtagaggagtacgggaggagcatcaag
cagctggccggccgggcccagagcctgctgtcttcaggccaccccgagggggaacagatc
atcagacttcaggggcaggtggacaagcagtacgcggggctgaaggacatggcagaggag
cgcaggcggaagctggagaacatgtaccacctgttccagctgaagcgggaggtggaagac
ctggagcagtggatcacggagaaggagctggtggcctcctccccagaaatggggcaagac
tttgaccacgtgactctgctccgggacaagttccgggactttgcccgggagaccggggcg
actggacaggagcgggtggacaacgtgaatgccatcatcgagcggctcatcgacgtgggc
cacgcagaggcggccaccatcgccgagtggaaggacgggctgaacgagatgtgggcggac
ctgctggagctcattgacacgcgcatgcagctgctggccgcctcctatgacctgcagcgc
tacttctacactggcgccgagatcctgggcctcattgacgagaagcaccgcgagctgcct
gaggatgtggggctggacgccagcaccgccgagtccttccatcgcgtgcacacagccttc
gagcgggagctccacctgctgggtgtgcaggtacagcagttccaggacgtggccacccgc
ctgcagacagcgtacgctggagagaaggcagacaccatccagaacaaggaacaggaggtg
tctgctgcatggcaggcgctgctcgatgcctgcgcggggcgccgcacccagctggtggac
acagcggacaaattccgcttcttcagcatggtccgagacctcctctcctggatggacagc
atcatccggcagatcgagacccaggagaagcccagggacgtctcctcggtggaactgctc
atgaagtatcacaagggcattctggcggagatggaaacccgaagcaagaacttcagcgcc
tgcctggagctcggcgagtccctgctgcagcggcaacaccaagcctcggatgagatcagg
gagaaactgcagcaggtggtgtccaggaggaaggagatgaaggagaagtggaaggcccgc
caggagcagctccacatgtggttggaagtgtgccagttctctcgggacgcctcagtggct
gaagcatggctgatcgcccaggagccctacctggccagccgggactttggacacacggtg
gacagcgtggaaaagctcatcaagaggcatgaggcttttgagaaatccacggcaggctgg
gcagagcgcttcgccgccctggagaagcccaccacgcttgagctcaaagaacaccagacc
ctggagagaactgacgaggagactgggcctcaagaagaggaaggcgagacagcaggggag
gctccccgaggtccccaccgagcagccaccgagagaacgtccccgggggaagaagagagg
cagtggccccaggacctgcagccgccactgccaccagggccgcacaaggaagggcaggag
gagaaatccagcacagatgagaagcccaccacagagcccctctttaaggtcctggacacg
cctctgagcgagggtgaagagcctacaacgctgccggcccaggtggaccacgggcacagc
gtgcagatggagggctacttgggccgcaagcatgacctggaggggcccaacaagaaggcg
tccaacaggtcctggaacaacctgtactgtgtgctcaggaatagcgagctgactttctac
aaggatgccaagaacctggccctgggggtgccctaccatggggaggagcccctggccctg
agacatgccatctgtgagattgctgccagctacaagaagaagaagcacgtcttcaagctg
aggctgagcaatggcagtgagtggcttttccacggcaaggatgaggaggagatgctgtcc
tggctgcagggcgtgagcaccgccatcaacgagtcccagagcatccgtgtcaaggcacag
agcctgcccctaccctccatcaccggccccgacgccagcctcggcaagaaagacaaggag
aagagattcagcttcttccccaaaaagaagtag
DBGET
integrated database retrieval system
