Phocoena sinus (vaquita): 116747000
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Entry
116747000 CDS
T07759
Symbol
CLTRN
Name
(RefSeq) collectrin isoform X1
KO
K20004
collectrin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116747000 (CLTRN)
Membrane trafficking [BR:
psiu04131
]
SNARE
SNARE associated proteins
Others
116747000 (CLTRN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collectrin
Glycophorin_A
EphA2_TM
TMEMspv1-c74-12
ECSCR
DUF2500
Motif
Other DBs
NCBI-GeneID:
116747000
NCBI-ProteinID:
XP_032474705
Ensembl:
ENSPSNG00000018350
UniProt:
A0A8C9CHD8
LinkDB
All DBs
Position
X:complement(12824716..12863918)
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AA seq
222 aa
AA seq
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MLWLLFFLVSAIHAELCQPDAENAFKVRLSLRTALGDKAYTWDTNEEYLFKAMVAFSMRR
VPNREATEISHVLLCNVTQRVSFWFVVTDPSRNHTLPAVEVQSAIRMNRNRINNAFFLND
QTLEFLRIPATLAPPTDPSVPVWIIIFGVMFCIIIVATMLLILSGIRQHRRKNKGPSEME
DTEDKWENTVKIENGIPCDPLDMKGGHVNDAFVTEDERLTPL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggctgctcttttttctagtgagtgctattcatgccgaactctgtcagccagat
gcagaaaatgcttttaaagtgagacttagtctcagaacagctctgggagataaagcatac
acctgggatacaaatgaagaatatctcttcaaagcgatggtggctttctccatgagaaga
gttcccaacagagaagcaactgaaatttcccacgtcctactttgcaatgtaacccagcgc
gtgtcattctggtttgtggttaccgatccttcaaggaatcacacccttcctgctgttgag
gtacagtcagccataagaatgaataggaaccggatcaacaatgccttctttttgaatgac
cagactctggaatttttaagaattcctgccactcttgcaccacctactgacccctctgtg
cccgtctggattattatatttggtgtaatgttttgcatcatcatagtggcaaccatgcta
ttgattttgtcaggaatccggcaacatagaaggaagaacaaaggaccttctgaaatggaa
gacactgaagataaatgggaaaacacagtcaaaattgaaaatggcatcccctgcgatccc
ctggacatgaagggagggcacgttaatgatgcctttgtgacagaggatgagcggctcacc
ccactctga
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integrated database retrieval system
