Phocoena sinus (vaquita): 116747007 Help Entry 116747007         CDS       T07759                                  Symbol HCFC1 Name (RefSeq) host cell factor 1 isoform X1   KO K14966   host cell factor 1 Organism psiu  Phocoena sinus (vaquita) Pathway psiu03083   Polycomb repressive complex psiu04980   Cobalamin transport and metabolism psiu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:psiu00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     116747007 (HCFC1)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     116747007 (HCFC1)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     116747007 (HCFC1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:psiu01009]     116747007 (HCFC1)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:psiu03036]     116747007 (HCFC1)    03029 Mitochondrial biogenesis [BR:psiu03029]     116747007 (HCFC1) Protein phosphatases and associated proteins [BR:psiu01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      116747007 (HCFC1) Chromosome and associated proteins [BR:psiu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      116747007 (HCFC1)    HMT complexes     COMPASS/SET1 complex      116747007 (HCFC1)     MLL-HCF complex      116747007 (HCFC1)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      116747007 (HCFC1) Mitochondrial biogenesis [BR:psiu03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     116747007 (HCFC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_5 Kelch_3 Kelch_4 Kelch_1 Kelch_6 Kelch_2 fn3 Pur_ac_phosph_N Motif Other DBs NCBI-GeneID:  116747007 NCBI-ProteinID:  XP_032474723 Ensembl:  ENSPSNG00000021713 LinkDB All DBs Position X:complement(129779957..129803627) Genome browser AA seq 2066 aa AA seqDB search MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAATTPTTTTIQVLPTVPGSSISVPAAART QGVPAVLKVTGPQATAGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSN PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVSSTVGQQNGSVVRVCSNPPC ETHDTGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSGIGAGQRRDIRYTCV ASTVPAVVRVGMAAGASEGAQGSVKPSCQTRQTGATSTTMTVMATGAPCSAGPLFRPSLA LEAGGRGATLVQLGPLSTQVRPGGEGSPLAGLGPLVSVGRQLEAHHAHTTYAATTARSTV GAGEPSEVQGMPALGYESSPGAAVTAKALEALLCSSATVTQVCSNPPCETHETGTTPTPT TATSTGGAGQPEGGQQPPAGRPCETHQTASTGTTMSVSMGALLPDAAPSHRTLESGLEGA APPAVTPQAGASLLAPFPTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPPPPASDQG EVESTQGDGVNIPGSSPITTTVSSTLTRAVTTVTQSTPVPGPSVPKISSVTETTPGALTT EVPIPATITVTIANTETSDMPFSAVDILQPPEELQASPGPRQQLPPRQLLQPASAPLMGE SAEVLSASQAPELQAAVDLSSTGDPSSGQEPASSAVVATVVVQPPPPTQSEVDQLSLPQE LMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMAGT GEPMDTSEAAAAVTQAELSHLSAEGQEGQATTIPIVLTQQELAALVQQQQLQEAQAQQQQ HHLPTEALAPADSLNDPTIESNCLNELAGAAPSTVALLPSTATESLAPSNTFVAPQPVVV ASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKAPVKKENQWFDVGVIKGTNVMVTHYF LPPDDAAPSDDDSGAVPDYNQLRKQELQPGTAYKFRVAGVNACGRGPFSEISAFKTCLPG FPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQSGGESKSSTPAQLAFM RVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSG AKPASKRPMSSPEMKSAPKKSKADGQ NT seq 6201 nt NT seq  +upstreamnt  +downstreamnt atggcttcggccgtgtcacccgccaactcgccggcagtgctcctgcagccccgctggaag cgagtggtgggttggtcgggtccagtgccccggccccgccacggccaccgcgccgtggcc atcaaggagctcatcgtggtgtttggcggcggcaacgaggggatagtggacgaactgcac gtgtacaacacggcaaccaaccagtggttcatcccggccgtgagaggggacatccctcct ggatgtgcagcctatggcttcgtgtgcgatgggactcgcctgctggtatttggcgggatg gtggagtacggcaaatacagcaacgacctctacgagcttcaggcaagccggtgggagtgg aagagactcaaagcaaagacgcccaaaaacgggccccctccgtgtcctcggctcgggcac agcttctccctcgtgggcaacaaatgttacctgtttggaggtctggccaacgatagcgag gaccccaagaacaacattccgaggtacctgaatgacttatacatcctggaactgcggcca ggctctggagtggtagcctgggacattcccatcacttacggcgtccttcccccaccccgg gagtcccacactgcagtggtctacaccgagaaagacaacaagaagtccaagctggtgatc tatggagggatgagtggctgcaggctgggggacctctggaccctggatattgagactctg acgtggaataagcccagcctcagcggggtggcacctcttcctcgaagtctccactcggct acgaccataggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac ctggataccatggcctgggagaccatcctgatggatacgctggaggacaatattccccgg gcccgtgccggccactgtgctgtagccatcaacacccgcctgtacatttggagtgggcgt gacggctaccgaaaggcctggaacaaccaggtctgctgcaaggacctctggtacctggaa acggaaaagccaccgcccccggcccgggtacagctggtacgagccaacaccaactccctg gaggtgagctggggggctgtggcaacagccgacagttatcttctgcagctccagaaatat gacattcctgccacggctgctactgccacctcccctacacccaatccagtcccgtctgtg cctgccaaccctcccaagagccctgccccagcagcagccgcgcctgctgtgcagccactg acccaagtaggcatcacgctcctgccccaggctgccgccaccaccccaaccaccaccacc atccaggtcctgccgacggtgcctggtagctcgatctccgtgcctgccgcagccaggact caaggtgtccctgctgttctcaaagtgaccggtcctcaggctacagcaggaaccccattg gtcaccatgcgacctgccagccaggctgggaaagcccccgtcactgtgacctcgcttccc gcaggcgtgcgaatggtcgtgcctacgcagagcgcccaggggacggtcatcggcagcaac ccgcagatgagtggcatggcggcgttggcagccgcggctgctgccacccagaagatccct ccttcctcggcacccacggtgctgagtgtcccggccggcaccaccatcgtcaaaactgtg gccgtgacgcctggcaccaccaccctcccagccactgtgaaggtggcctcctcgccagtc atggtgagcaacccagccactcgcatgctgaagactgcagccgcccaggtggggacgtct gtctcctctgccgccaacacgtccacccgccccatcatcacagtacacaagtcggggacc gtgacagtggcccagcaggcacaggtggtgaccacagtggtgggtggggtcaccaagacc atcaccctggtgaagagccccatctctgtcccaggaggcagtgctctgatttccaatctg ggcaaagtgatgtcagtggtccagaccaaaccagttcagacttctgcggtcacaggccag gcgtctacaggcccggtgactcagatcatccagaccaaagggcccctgccggctgggact atcctgaagctggtgacgtcagcagatgggaagcccaccaccatcatcactaccacgcag gccagcggggcagggactaagcccaccatcctgggcatcagcagcgtgtcccccagcacc accaagcccggcacgaccactatcatcaagaccatccccatgtcggccatcatcacgcag gcgggcgccacgggtgtgaccagcagtcccggcatcaagtcccccatcaccattatcacc accaaggttatgacttccggaactggagcccccgccaaaatcatcactgctgttcccaaa atcgccactggccacgggcagcaaggagtgacccaggtggtgctgaagggagcccccggc cagccgggcaccattctccgcaccgtgcccatgggcggcgtccgcctggtcacccccgtt actgtctccgccgtcaagccggctgtcaccacgttggtcgtgaagggcacaacaggcgtc acgaccctaggcaccgtgacgggcaccgtgtccaccagcctcgccggggccgggggccac agcaccagtgcctccctggccacacccatcaccaccttgggcaccatcgccaccctctcg agccaagtgatcaaccccaccgccatcaccgtgtcggcggcacagaccacgctgacggcg gccggtgggctcaccacccccaccatcaccatgcagcctgtctcccagcctacccaggtg actctgatcacagcgcccagcggagtcgaggcccagcctgtgcacgacctccccgtgtcc attctggcctcgcctactacagaacagcccacggccacggtcaccatcgctgactcaggc cagggtgacgtgcagcccggcactgtgacactggtgtgctccaacccgccctgcgagacc cacgagacgggcaccaccaacacagccaccaccactgtcgtggctaatctcgggggacac ccgcagcccacccaggtgcagtttgtctgcgacagacaagaggcagctgcttctctcgtg agctccacagtgggccagcagaacggcagtgtggttcgcgtctgttccaacccgccgtgc gagacccacgacacgggcaccaccaacacggccaccaccgccacctccaacatggctggg cagcacggctgctccaacccgccgtgcgagacccacgagacgggcaccaccagcacggcc accaccgccatgtcaggcatcggagccgggcagcggcgagacatccggtacacctgtgtg gcaagcaccgtgcccgccgtggtccgggtcggcatggctgccggggcgtcagagggagcc caggggtctgtcaagccctcgtgccaaacccgccagaccggcgcgaccagcaccaccatg actgtgatggccaccggggccccgtgctcagctggcccactcttcagaccaagcttggcc ctggaggctggtggccgtggcgccacgctcgtgcagttgggccctctgagcacccaggtc aggcctggtggtgagggtagccccctagctggcctgggcccgctggtatccgtggggcgc cagctggaggcgcatcacgcccacacgacgtacgccgccaccacggcccgctctaccgtg ggtgccggggaacccagtgaggtgcaggggatgcctgcgcttgggtacgagagctcgcct ggtgccgctgtgactgcgaaggccctggaggcactgctgtgctcctcggccaccgtgacg caggtctgctctaaccccccgtgcgagacccacgagacgggcaccacccctacgcccacc accgccacgtccaccgggggtgcgggccagccagagggtgggcagcagccccccgctggc cgcccctgtgagacgcaccagacggcttccaccggtaccaccatgtcagtcagcatgggc gccctgctccctgacgccgcgccctcccacagaaccctggagtccggcttggagggggcg gcaccgcccgcagttaccccccaggctggagcttcattgctggctcctttcccgacgcag agggtgtgctccaacccaccctgtgagacccacgagacaggcaccacgcacacggccacc accgtcacctccaacatgagttccaaccaagaccccccgccgcctgccagcgaccaggga gaggtggagagcacccagggcgacggcgtgaacatccctggttccagtcctatcacgaca acggtgtcctccacgctgacacgggccgtgaccactgtgacacagtccacaccggtcccg ggcccttcggtgccgaagatctcatcagtgaccgagactaccccaggggctctgaccacc gaagtccccatcccggccacgataacagtgaccatagccaacacagaaacttctgacatg cccttctctgctgttgacatcctgcagcccccagaggagctccaggcctcgccagggcct cgccagcagcttccgccacggcagctcctgcagcctgcctccgcacccctgatgggggag tccgccgaggtcctgtcagcctcccaggcccccgagctccaggccgccgtggatctgagc agtacaggggacccgtcttcaggccaggagcctgccagctcagccgtggtagccactgtg gtggtccagccgccaccgcccacgcagtccgaagtagaccagttgtcacttccccaagag ctgatggccgaggcccaggcgggcaccaccaccctcatggtaacggggctcacccccgag gagctggcggtgactgctgccgctgaagcggccgcccaggccgcagccacagaggaagcc caggccctggccatccaggccgtgctccaggccgcgcagcaggctgtcatggcaggcacc ggggagcccatggacacgtcggaggcggcggccgctgtgacgcaggcggagctgagccac ctgtcggccgagggccaggagggccaggctaccaccatccccatcgtgctgacgcagcag gagctggccgccctggtgcagcagcagcagctccaggaggcgcaggcccagcagcagcag caccacctccccacggaggcgctggcccctgccgacagcctcaacgacccgaccatcgag agcaactgcctcaacgagctggccggggctgcgcccagcaccgtggcactgctgccctcc acagccactgagagcctggctccgtccaacacgtttgtggccccccagccagtcgtggtc gccagtcccgcgaagctgcaggccgcggctaccctgacggaagtggccaatggcatcgag tccctgggcgtaaagccagacctgccacccccgcccagcaaagcccccgtgaagaaagag aaccagtggtttgatgtgggggtcattaaaggcaccaacgtgatggtgacacactatttc ctgccacctgatgacgctgctccgtcggatgacgactcgggcgcggtgcccgactataac cagctgcgcaagcaggagctgcagcctggcaccgcctataagttccgcgttgccggggtc aacgcctgtggccgggggcccttcagcgagatctcagcctttaagacgtgtctgcctggc ttcccgggggccccctgtgccattaaaatcagcaaaagtccagacggcgctcacctcacc tgggagccgccctctgtgacctctgggaagatcatcgagtactcggtgtacctggccatc cagagctcgcagtccgggggcgagtccaagagctccaccccggcgcagctggccttcatg cgggtgtactgtgggcccagcccctcctgcctcgtgcagtcctccagcctctccaacgcc cacatcgactacaccaccaagcccgccatcatcttccgcatcgctgcccgcaacgagaag ggctacggcccagccacgcaggtcaggtggttgcaagaaaccagtaaggacagctctggc gccaagccggccagcaagcggcccatgtcctctccagaaatgaaatcggctccaaagaaa tcgaaggcagacggtcagtga

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