Phocoena sinus (vaquita): 116747045
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Entry
116747045 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RLIM-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116747045
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116747045
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116747045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_4
DUF4811
zf-RING_16
zf_RING_Vps8_fungal
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116747045
NCBI-ProteinID:
XP_032474769
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Position
X:30772852..30776159
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AA seq
653 aa
AA seq
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MENSDSNXEEDGVSAQRISQTDRLVWEEDFSRFVNNLSEEDYKLMRDNNLLGIPGESTEE
ELLRRLQLIKENPPQDSDENTDRGDSSDDVSSGDSTIDWLNCSGQTENMTSGQRENQFWR
EQSQINPKSDQFRFSLETNFNLDNGSPNPENEYVASARLPRRENTEDSQRQVDNPQSESI
FTRPSMSEQDTTETLMEFPPARSQRRARSRSPEYRRTRARIESWSPPCSLRETVQRLNHS
IPSQTFEQPLVSENARFSRTEHQEILRQQMTGFELQNSGLIETSRTRNAVHGENSPDTTG
SGESWGMRKIHPTIPFNLEVGQVHSGAYSQRDSRASRTQLTSETPNNTATSESERGLRHM
YSHSEQADVRAYVNTIRNPVCKILNTSLNDTTSVPIQSMLRQTMTEFSNSSNLMDINSNL
EHSVSPPSQNMEWPESPNRRDGPNGSSSGRFCCDSNPSYDTHSSSTLICHSRPNCMFSSS
SSPISSFSPISSSNPISSSSTISSSSTISSSSSSDENSLMFEGSEERNLSSDVSSETTQG
SRRMTPVIFNESDSGPSHNLQQFFLLSGDNLYPTTGLTKAQIDNLAVRSFGENDALKACS
ICITEYTENSKLRILPCSHEYHIHCIDRWLSENSTCPICREQVVDSNESENSN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcggattccaacngtgaagaagatggagtttcggcccaacgcataagtcaa
acggaccgattggtttgggaagaagatttctccaggttcgtaaataatctgagtgaagaa
gattacaaacttatgagagacaacaatcttctaggcattccaggtgaaagtacagaagaa
gagttgctgagaagacttcagctaattaaagaaaacccaccacaagactcagatgaaaat
acagatagaggagactcttcagatgatgtgtctagtggtgactctacaatagactggctt
aactgttctggacaaactgaaaatatgacaagtggacaaagagaaaaccaattttggaga
gaacagagccaaattaatcctaaaagtgatcagttcagattcagtttagaaacaaatttt
aaccttgataatgggagtccaaatccagagaatgaatatgtagcatctgcaagacttccc
agaagagaaaatacggaagacagccaaaggcaagtggacaatccacaatctgaatcaata
tttacaagaccatctatgtctgaacaagatacaactgaaacattaatggaattcccacct
gccagaagtcagagaagagcaagaagtaggagcccagagtatcggagaaccagagcaaga
attgaaagttggtcgcctccatgttcacttagggaaactgtacaaagacttaatcatagt
ataccatctcagacttttgagcagcctctggtaagtgagaatgcgagattttctagaact
gagcaccaagaaatattgagacagcaaatgactggatttgagttgcaaaacagtggtctt
attgaaacttctagaacaaggaatgccgttcatggagaaaattctccagatacaaccggc
agtggtgaatcttggggaatgaggaaaatacatccaaccatacccttcaatcttgaagta
ggacaagttcattctggagcatattctcagagagacagcagagctagtagaactcagtta
acatctgagacaccaaacaacactgccacttctgaaagtgaacgaggactgaggcatatg
tattcacattctgagcaggcagatgtgagagcttatgtcaataccatcagaaatcccgtt
tgtaaaattttaaatactagcttaaatgatacaacatctgttccaattcagagcatgtta
aggcagacaatgacagaatttagtaactcaagtaaccttatggacattaacagtaattta
gagcacagtgtctcacctccaagtcaaaacatggaatggccagagtcaccaaatagaaga
gatggtcctaatggtagtagtagtggtagattttgttgtgattcaaatcctagctatgat
acccattcaagttccacgctgatttgtcattcaagacccaattgtatgtttagttccagt
tctagtcctatttccagtttcagtcctatttccagttccaatcctatttccagttccagt
actatttccagttccagtactatttccagttccagctcaagtgatgaaaattcactgatg
tttgaaggcagtgaagaaagaaacttatcatcagatgtatcatcagagaccacgcaaggg
agtagacgaatgaccccagtaatatttaatgaaagtgactctgggccctcccataatctg
caacagtttttcctcttaagtggagataatctatacccaactacaggactcaccaaagca
cagattgacaacttggctgtaagatcttttggtgaaaatgatgcattaaaagcctgtagc
atttgcattacagagtacacagaaaacagcaagcttcgcatcctaccttgctcccatgaa
tatcacattcactgcattgatcgctggctgtctgagaactcgacctgtcctatttgtcgt
gagcaagtagtggattccaatgagagtgaaaattctaattga
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