Phocoena sinus (vaquita): 116747156
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Entry
116747156 CDS
T07759
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116747156 (NUP62CL)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116747156 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747156 (NUP62CL)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116747156 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
betaPIX_CC
DUF4164
Duffy_binding
Motif
Other DBs
NCBI-GeneID:
116747156
NCBI-ProteinID:
XP_032474844
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Position
X:complement(91410045..91477278)
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AA seq
461 aa
AA seq
DB search
MGLAVTWQREFQDVSSVSAERLNSHGYREAYLVVVNGRPFQLTRSTPFKPGSQHRSSGEA
PTAQAGSSRPQKFRVCLSGRSAVLTAFAFTSQPPELQPPPVFVCSGNQQAPSLLLSSCTC
ILDRTASCPADPEQRGQKGLVPASTVATATSSSTMLFTSFSNVSTSTAATGLSFGASTTL
AGMLGGTALGFGLNFPGAGGAAAVASTTTSTITTTTVTTTSTSTSTTSSFTMNLKPLTST
GVNNTVPFGMIPKPFTLTISEIITPVMTYGQLSGLVNKWSLELEDQEKHFLHQVTQVNAW
DYTLIENGETIIALHGEVQKVKQDQKRLEQELYFILSQQKELEDLLTPLEESVKDESGSV
CLQHTYEERERIYQLAEDVYAQLKRTAQDLKDIIEYLNTFGSPADTTGPLQQICKILNAH
MDFLQWIHQTSGVLQRNVEEREVFEHRHYREQECNVRIAFD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggcttggcagtgacatggcagcgagagtttcaggacgtgagcagtgtttcggcagaa
aggttgaatagccatggttacagggaggcctatttagttgtggtcaatggccgccctttc
cagttaactaggtcgaccccttttaagcctgggtctcagcatcgctccagcggagaagcg
cccactgcgcaggctggttcttctcggccgcagaagttccgggtctgcctctctggccgc
tccgcagttttaactgccttcgcctttacttcgcagccaccagagttacagccaccaccg
gttttcgtttgttcaggaaatcagcaggctccctcactgttactttcttcctgcacgtgt
attctagatcggaccgctagttgtccagcagatcccgaacagcgtgggcagaaagggttg
gttccagcatctactgttgctaccgctactagttcaagcacaatgctgtttacctcattt
tcaaatgtttctacctccactgctgctactgggctctcatttggtgcctctacaactttg
gctggaatgcttggtggtacagcattggggtttggattaaatttccctggagcaggtgga
gcagctgctgttgcatctactacaacgtcaaccatcaccactaccacggtcaccaccacc
agcaccagcaccagcaccaccagtagctttaccatgaatctgaaaccactgacatcaact
ggcgtgaataacactgttccatttggcatgattcctaaaccttttactttgaccattagt
gaaatcataactcctgtgatgacatatggtcagctgagtggtctggtaaacaaatggagc
cttgagttagaggatcaagagaaacactttcttcaccaggtcacccaggtcaatgcttgg
gactatacattgattgagaatggtgagacgattattgctttacatggagaagtgcaaaag
gtgaaacaggatcagaaaaggctggagcaagaattgtattttatcctgtcacagcagaaa
gaactagaagatctcttgacccctttagaggagtctgtaaaggacgagagtgggtctgtt
tgtctgcagcatacatatgaggagcgtgagaggatttaccagttagcagaagatgtatat
gctcagctgaaacgaacggcccaagatctcaaggacattattgagtacctgaatacattt
ggaagtcctgctgacactactggcccgctccagcagatctgcaaaattctgaatgctcat
atggactttctacaatggattcatcagacttcaggcgtgctgcaaaggaatgtagaagag
agagaagttttcgagcatcgtcattacagggagcaggaatgcaatgtcaggattgctttt
gattga
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