KEGG   Phocoena sinus (vaquita): 116747246
Entry
116747246         CDS       T07759                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable glutamate--tRNA ligase, mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu00860  Porphyrin metabolism
psiu00970  Aminoacyl-tRNA biosynthesis
psiu01100  Metabolic pathways
psiu01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    116747246
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    116747246
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:psiu01007]
    116747246
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psiu03016]
    116747246
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psiu02048]
    116747246
Enzymes [BR:psiu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     116747246
Amino acid related enzymes [BR:psiu01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   116747246
Transfer RNA biogenesis [BR:psiu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    116747246
 Prokaryotic type
   Other AARSs
    116747246
Prokaryotic defense system [BR:psiu02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    116747246
SSDB
Motif
Pfam: tRNA-synt_1c
Other DBs
NCBI-GeneID: 116747246
NCBI-ProteinID: XP_032474913
LinkDB
Position
X:complement(127513746..127526120)
AA seq 786 aa
MGAIQPWWYTLEAMQQGKPQCRAKMPATLGQPLKGQSVRGGLILFSKRADSSLRLEKLQY
PPQGRPPRILLKPQSKAEHAPIGARCLGELRISGASSHADPPFYNSAPPPRVLLTSQEQG
PENTLGKVILADTRSFGQKFKVRRNNGVGRIRQGPGGNFRKFQSLWSSPSGKWISDPSVA
REREATAYLHALAMGKAIKSPHDSLSARGSLATEKGCCIPGGPQWPWATPGTGCEASLGT
DSRAAVRVRFAPSPTSFLHLGGLHTALYNYVFAKKHLRLEDMDQTCLVLGAAENIEDMLE
WAGVPPDKSPRRGGPAGPYLESQRLALYTHATEALLKREALRNHQTRQYDNQCRSLSQAQ
VAQKLAKDPKHATHFCPEXETPAFQDLVYGWNPHEVVSMEGDPVILKSDGFPTYHPACVV
IDHHMGISRLLRGSEWLVPTSKHLLLHQALGWQPPHFAHLPLLLNRDGSKLSKRQGDICC
RRLPADALLDIITNCGSGFAENQMGRALPELIKQSNLTRITCHSALLDPEKLPEFNRLHL
RQLVSDETQRRQLVGKLQALAEETFGSQLQDRRVLDAAYVERIVLLRQGHICRLQDSVSP
AHSYLWTRPAVGRAQLGAVSERVDVIAKHVPGLLEGSGGNLIQDMLNGELKKLPESLEGT
KHSNAMKLQRKCGNEYRRCFPDGEKVCRTAEVAVGTVVAGPALRQGEQGSGPCRKLVEGT
KSGHRASGCTGAFMAPRQACPNQSASVGQPPLTSLTLERKASYVVLTPQYTAEVRSWFTE
QSQLMF
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgggggccattcaaccatggtggtatacgttggaagcaatgcagcagggcaaaccccag
tgccgggccaagatgccagccaccctagggcagccgctgaaggggcaaagtgtcagaggt
ggtcttatactattttccaaaagagccgatagcagcctacgcctggagaagttgcagtac
cctccccaaggaagacccccgagaatactcctcaagcctcaaagcaaggcagagcatgcc
cccattggtgccaggtgcctaggggagctgaggatctcaggagcaagcagccacgcagat
ccccccttctacaactcagccccaccgcctcgtgtcctcctaactagccaagaacaggga
ccagagaacactctggggaaagtgatcctggcggatacaagatcgtttggtcagaagttc
aaggtaaggagaaacaacggtgttggaagaatcaggcaggggccaggtggcaacttcagg
aagttccagagtctatggagctctccatctggaaaatggatctcagacccttcagtggcc
cgggaacgggaagctactgcctacctgcatgccctggcaatggggaaggccatcaaaagc
ccccacgactctttgtctgctagaggctccctggccacagaaaagggttgctgcatcccc
ggaggcccccagtggccttgggccacccctgggacggggtgcgaggccagcctgggcacc
gattccagggctgctgtgcgagtgcggttcgcccccagccccacaagcttcttgcacctg
ggcggcctccacactgccttgtacaactacgtctttgccaagaagcacctgaggctggag
gacatggatcagacctgccttgtgcttggggcagcagagaatattgaggacatgctggag
tgggcaggcgtcccccctgacaagagcccccgccggggaggtcctgcagggccctacctg
gaatctcagcgacttgcgctctacacgcatgctaccgaagctctgctgaagagggaggcc
ctgaggaaccatcagactcgccagtatgacaatcagtgccggagcctgagccaggcgcag
gtggcccagaagctggccaaagaccccaagcatgccacccacttctgcccggagngggag
acaccagccttccaggacttggtgtatggctggaatccgcacgaggtggtcagcatggag
ggggacccggtcatcctgaagagtgatggcttccccacgtaccacccggcctgcgtggtg
atcgaccaccacatgggcatcagccgcttgctgcggggctccgagtggctggtccccacc
tctaagcacctgctcctccaccaggccctgggctggcagcccccgcactttgcccacctg
cccctgcttctcaacagggatggcagcaagctgtccaagagacaaggggacatttgctgc
cggcggcttcctgccgatgccctgcttgacatcatcaccaactgcggctcagggtttgca
gagaaccagatggggagggccttgccagagctgatcaaacagtctaacctgacccggatc
acctgccactcagccctgctggacccggaaaagctcccagaattcaacaggctgcacctc
cgccagctggtgagcgatgagacccagagacgccaactggtggggaagctgcaggccctc
gcggaagagacttttgggagccagctgcaagacaggcgtgtgctggacgcagcctacgtg
gagaggatcgtcctgctgagacaggggcacatttgccgcctgcaggattcggtctcccca
gcgcactcctacctgtggactcgccctgccgtgggtcgagcgcagctgggtgccgtctca
gagagggtggacgtcattgccaagcatgtgccggggctcttagaaggatccggtgggaac
ttaattcaggacatgctgaacggagaactgaagaagctgccagaaagtctggaaggcacc
aaacacagtaacgcgatgaagctccaaaggaagtgcgggaacgaatacagaaggtgcttt
ccagatggagagaaggtgtgcaggacagcggaggtggccgtgggaaccgtagttgcggga
cctgccctcagacagggggagcaggggtctggaccctgtcggaagctcgtggaaggaacc
aagagtgggcacagagcctccgggtgcacaggtgcatttatggcgccacgccaggcatgt
cctaatcagtcggccagtgtcggccagccacctctcacctccctgactctggaaaggaag
gcctcatatgtggttctgacaccacagtacacagcagaggttaggagctggttcacagaa
cagtcacagctcatgttttag

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