Phocoena sinus (vaquita): 116747303
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Entry
116747303 CDS
T07759
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116747303 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116747303 (ATRX)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116747303 (ATRX)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116747303 (ATRX)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116747303 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116747303
NCBI-ProteinID:
XP_032475010
Ensembl:
ENSPSNG00000021664
LinkDB
All DBs
Position
X:complement(65904056..66151282)
Genome browser
AA seq
2494 aa
AA seq
DB search
MKRAVKVFLFCSFPESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKVSGSGNN
SDMMENSKEEGASSSEKSRSSGSSRSKRKPSIVTKYVESDDEKPLDETVNEDASNENSEN
DITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTAC
GQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDF
CHNAFCKKCILRNLGRKELSTIMDENNQWHCYICRPEPLLDLVTACNSVFENLEQLLQQN
KKKIKVDNEKSSKVYDHTPRFSPKKNSSNCNGEEKKLDDSCSGSVTYSYSALIVPKEMIK
KAKKLIETTANMNSSYVKFLKRATDNSEINSATKLRQLKAFKSVLADIKKAHLALEEDLN
SEIRALDAVNKEKNTKEHKVIDAKSETKVRKGEKPCALERKDFSKSEAKLSRKQVDSERV
DQSVAVEEQRANKNPSGEHKKSDKKEEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLET
AMEVQSSADYQGDGNSGTEQELESSVKLNITSKDNRGGIKSKTTAKVTKELYVKLTPVSL
FSSPIKGADCQEVPQDKDSYRSSCLNPKLENCGLEQEKNDNEHLVESEVPLLSEESDLRR
SPRVKTTPLRRQTETNPTTFNSDEENNDTVKEKQKLSVSMRKKDKRNSSDSAIDNPKPNK
LPKSKQSETVDQNSDSDEMLAILKEVSRMSHSSSSDTDINEPHTNHEKTLYDVKTQTGKD
DKGKRKRKSSTSGSDFDIKKGKSAKRSIISKKKRQNQSESSNYDSELEKEIKSMSKIGAA
RTTTKRVPNKEDYDSSEDEKHSKKGMDNQGQKSLRTAQEGSSDDAERKEERENFSSAEGI
VDKDKTLMELRDRLSKKQQPSVSSDGADKLSSGKEESFNSPEDKKVAETKEKSKYLKTKM
CKKVQGGLSHVAEKFPKKEQSDESSEDDNKQSKKGTEEKEKKTTDLKKKVIKMEQQYESS
SDSTEKLPEGEEICHFPKGIKQNKNDTTDGEKKSKKIKGKTSKKKDELSDNAEKLPGKRD
SCDSSEDKRSKNGTSSREKKRCNLPEKSSRKRQDCSSSDTEKYSMKEDGCDSSDKRPKRI
ELRERRNLNSKRNTREVQNGSSSSDVEESSEDNKKLKKQRASAKKKAGNMKEKMRSSLRT
STKRKQADISSSSSSDIGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALS
KSMPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDESEEGKKRSGKHNEENP
GDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEAKGRNR
RKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQ
EDSSSENKSNSEEDDKEEDEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKE
EEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIK
LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF
STALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVM
IIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIR
SRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRV
MKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGN
SSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSEETS
MSLSSDDYTKKKKTKGKRGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPS
VSLKLEESKATSSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVL
VFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKW
AEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTK
PVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP
NSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY
EAEKKGLTMRFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEA
TNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQ
QMLISCVQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRG
MYQSVAGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagcagtgaaagttttcctgttttgcagctttcctgaaagcaagttgaataca
ttggtgcagaagcttcatgactttctggcacactcatcagaagaatctgaagaaacaagt
tctcctccaagacttgtgatgaaccaaagcacagataaagtcagtggttctggaaataac
tctgatatgatggaaaacagcaaggaagagggagctagctcttcagaaaaatccagatca
tcaggatcatcacgatcaaagaggaaaccttcaattgtaacaaagtatgtagaatctgat
gatgaaaaacctttggatgaaactgtaaatgaagatgcttctaatgaaaattcagaaaat
gatattactatgcaaagcttgccaaaaggtacagtgattgtacaaccagagccagtgctg
aatgaagacaaagatgattttaaagggcctgaatttagaagcagaagtaaaatgaaaact
gaaaatctcaaaaaacgcggagaagatgggcttcatgggattgtgagctgtaccgcttgt
ggacaacaggtcaatcattttcaaaaagattccatttatagacatccttcactgcaagta
cttatttgtaagaattgctttaaatattacatgagtgatgatattagccgtgactcagat
ggaatggatgaacagtgtagatggtgtgcagaaggtggaaacttgatttgttgtgacttt
tgccataatgccttctgcaagaaatgcattctacgcaaccttggtcgaaaggagctgtct
acaataatggatgaaaacaaccaatggcattgctacatttgtcgcccggagcctttgttg
gatttggtcacagcatgtaacagcgtatttgaaaacttagaacagttgttgcaacaaaat
aagaagaagataaaagttgacaatgaaaagagtagtaaagtatatgaccatacacccaga
ttttctccaaagaaaaacagttcaaattgtaatggagaagaaaagaaattagatgattca
tgttctggttctgtaacctactcttattcagcactaattgtgcccaaggagatgattaag
aaggcaaagaaactgattgagactactgccaacatgaactccagttacgttaagtttttg
aagcgggcaacagataattcagaaatcaattctgctacaaagttacgtcagcttaaggct
tttaaatctgtgttggctgatatcaagaaagctcatcttgcgttagaagaagatttgaat
tcagagattcgagctttggatgctgtaaacaaagagaaaaataccaaagagcataaagtc
atagatgctaagtctgaaacaaaagtacgaaaaggggaaaaaccctgtgctttggaaagg
aaggatttttcaaaatcagaagctaaactgtcaagaaagcaggtagatagtgaacgtgtg
gatcagagtgttgcagtagaggaacaaagagcaaataaaaatcccagtggtgaacataaa
aaatctgataaaaaagaagaacctcagtatgaacctgctaacacttctgaagacttagac
atggatattgtgtctgttccttcctcagttccagaagacatttttgagaatcttgagact
gctatggaagttcagagttcagcagattatcagggagatggcaacagtggaactgagcaa
gaactggagagttctgtaaaattaaatattacttcaaaagacaacagaggaggtattaaa
tcaaaaacaacagctaaagtaacaaaagaattatatgttaaactcacccctgtttccctt
tttagttccccaattaaaggtgctgattgtcaggaagttccacaagataaagatagctat
agaagctcttgtctgaaccccaagctggagaactgtggacttgaacaggaaaagaatgat
aatgagcatttggttgaaagtgaagttccattactttcagaagaatctgatcttcgaaga
tccccacgtgtaaagactacacccttgaggcgacagacagaaaccaaccctacaacattt
aattcagatgaagaaaataatgacaccgttaaggagaaacaaaaactatcagtttcaatg
agaaaaaaggataagcggaattcttctgacagtgctatagataatcctaaacctaataag
ttgcctaaatctaagcagtcagagactgtggatcaaaattcagattctgatgaaatgcta
gcaatcctcaaagaagtatccaggatgagtcacagttcttcttcagatactgatattaat
gaacctcatacaaatcatgagaagactttgtatgatgtaaagactcaaacaggaaaagat
gataaaggaaaaaggaaacgaaaaagttctacttctggctcagattttgatattaaaaaa
ggcaaatcagctaaaaggtctataatttctaaaaagaaacgacaaaaccagtctgaatct
tctaattatgactcagaattagaaaaggagataaagagtatgagtaaaattggggctgcc
agaacaacaacaaaaagagttccaaataaagaagattacgattcttctgaagatgaaaaa
cacagcaaaaaaggaatggataatcaaggtcagaaaagtttgaggactgcccaggaagga
tcatctgatgatgctgaaaggaaagaagagagagagaatttctcttcagcagaaggcata
gttgataaagacaagactctcatggaattgagagatcgactctctaagaagcagcagcca
agtgtttcctcagatggtgctgataagctttcttctgggaaagaggagagttttaattct
ccagaagacaaaaaggttgctgaaactaaagaaaagagtaagtatctgaaaaccaaaatg
tgtaagaaagtacaaggtggcttatctcatgttgctgagaagttcccaaagaaagaacag
agtgatgaatcctctgaagatgataacaagcagagcaaaaagggaactgaagaaaaagaa
aagaaaactacagacttgaagaaaaaagtaattaagatggaacaacagtatgaatcatca
tctgatagcactgagaaattacccgaaggagaagaaatttgtcattttcctaaaggcata
aaacaaaataagaatgacacgactgatggggaaaagaagagtaaaaaaataaaaggtaaa
acttctaaaaagaaggatgaattatctgataatgctgagaagttaccagggaaaagagat
agttgtgattcttccgaagataagaggagtaagaatggaacatccagtcgagagaagaaa
aggtgcaacttacctgaaaagagttcaaggaagagacaagattgttcatcatctgatact
gagaaatattccatgaaagaagatggctgtgattcttctgataagagaccaaaaagaatc
gaattaagggaaagaagaaatttaaattcaaagagaaataccagggaagtacaaaatggc
tcatcatcttctgatgttgaggagagttccgaagataataaaaagctgaagaaacaaaga
gcttcagctaaaaagaaggcaggcaatatgaaggagaaaatgagaagctccttaagaaca
agcactaaaaggaagcaggctgacatttcttcctcatcttcttctgatataggagatgat
gatcagaattctgtaggtgaggggagcagtgatgagcagaaaataaagcctgtgactgaa
aatttagtgctgtcttcacatactggattttgtcaatcttcaggagatgaagccttatct
aaatcaatgcctgtcacagtggatgatgacgacgatgacaatgatcctgagaatagaatt
gccaagaagatgcttttagaagaaattaaagccaatctttcctccgatgaggatggatct
tcagatgatgaatcagaagaagggaaaaaaagaagtggaaaacacaatgaagaaaaccct
ggagatgaggaagcaaaaaatcaagtcaattctgaatcagattcagattctgaagaatct
aagaagccaagatacagacataggcttttgaggcacaagctgactgtgagtgatggagaa
tctggagaagaaaaaaagacgaagcctaaagagcacaaagaagccaaaggcagaaataga
aggaaggtgagcagtgaagattctgaagattctgattttcaggaatcaggagttagtgaa
gaagttagtgaatctgaagatgaacaacggccaagaacacggtctgcaaagaaagcagag
ttggaagaaaatcagcgaagttataaacagaaaaagaaaaggcgacgcatcaaggttcaa
gaagattcatccagtgaaaacaagagtaattctgaagaagatgataaagaagaagatgaa
gaagaagaagaagaagatgaaaatgacgattccaagtctcctggaaaaggcagaaagaaa
attcgaaagattcttaaagatgataaactgagaacggaaacacaaaatgctcttaaggaa
gaggaagagagacgaaagcgtattgctgagcgggaacgtgagcgagagaaattgagagag
gtgatagaaattgaagatgcttcacccactaagtgtccaataacaaccaagttggtttta
gatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaatatggttatcaaa
ttgaaaccccatcaagtagatggtgttcagtttatgtgggattgctgctgtgagtctgta
aaaaaaacaaagaaatctccaggttcaggatgcattctcgcccactgcatgggccttggt
aagactttacaggtggtaagctttcttcatacggttcttttgtgcgacaaattggatttc
agcacagctttagtggtttgtcctcttaatactgctttgaattggatgaatgaatttgag
aagtggcaagagggattaaaagatgatgagaagcttgaggtctctgaattagcaactgtg
aaacgtcctcaggagagaagctacatgctgcagagatggcaagaagatggtggtgttatg
atcataggctatgagatgtacagaaatcttgctcaaggaaggaatgtgaagagtaggaaa
cttaaagaaatatttaacaaagctttggttgatccaggccctgactttgttgtctgtgat
gaaggccatattctaaaaaatgaagcatctgctgtttcaaaagctatgaattctatacga
tcaaggaggaggattattttaacgggaaccccacttcaaaataacctaattgagtatcat
tgcatggttaactttatcaaagaaaatttgcttggatccattaaggagttcaggaatcga
tttataaatccaatccaaaatggtcagtgtgcagattctaccatggtagatgtcagagta
atgaaaaaacgtgctcacattctctatgaaatgttagctggatgtgttcagaggaaagat
tatacagcattaacaaagttcttgcctccaaaacatgaatacgtgttagctgtgagaatg
actcctattcagtgcaaactctatcagtactacttagatcacttgacaggtgtaggtaat
agcagtgaaggtggaagaggaaaggcaggtgcaaaacttttccaagattttcagatgtta
agtagaatctggactcatccttggtgtttgcagctggactacattagcaaagaaaataag
ggatattttgatgaagacagtatggatgaatttatagcttcagattctgaagaaacctcc
atgagtttaagctctgatgattatacaaaaaagaagaaaacaaaggggaaaagggggaaa
aaagatagtagctcaagtggaagtggcagtgacaatgatgttgaagtgattaaagtctgg
aattcaagatctcgaggaggtggtgaaggaaatgtggatgaaacaggaaacaatccctca
gtttctttaaagctggaagaaagtaaagctacttcctcttctaatccaagcagcccagct
ccagactggtacaaagattttgttacagatgctgatgctgaggttttagagcattctgga
aaaatggtacttctgtttgaaattcttcgaatggcagaggaaattggggataaagtcctt
gttttcagccagtctctcatatctctggacctgattgaagattttcttgaattggctagt
agggagaagacagaagataaagataaacctcttatttataagggtgaagggaagtggctc
cgaaacatagactattaccgtttagatggttctacaactgctcaatcaaggaaaaaatgg
gctgaagaatttaatgatgaaactaatgtgagagggcgcttgtttatcatttcaaccaaa
gcaggatctcttggaattaatctggtagctgctaatcgagtgattatatttgatgcttct
tggaatccgtcttatgacatccaaagtatattcagagtttatcgctttggacaaactaaa
cctgtgtatgtatataggttcttagctcagggaaccatggaagataagatttatgatcgg
caagtaactaagcagtcactgtcttttcgagttgttgatcaacagcaagttgaacgtcat
tttaccatgaatgagcttactgaactttatacctttgagccagacttgttagatgaccct
aattcagaaaagaagaagaaaagggatactcccatgctgccaaaggacaccatacttgca
gaacttcttcaaatacataaagaacacattgtaggatatcatgaacatgattctcttttg
gaccacaaagaagaagaagagttgactgaagaagagagaaaagcagcttgggctgagtat
gaagcagagaagaagggactgaccatgcgtttcaacataccaactgggaccaatttaccc
cctgtcagtttcaactctcaaactccttatattcctttcaatttgggagccctgtcagca
atgagtaatcaacagctggaggacctcattaatcagggaagagaaaaagttgtggaagca
acaaacagtgtgacagcagtgaggattcagcctcttgaagatataatttcagctgtatgg
aaggaaaacatgaatctctcagaggcccaggtacaggcgttagcattaagtagacaagcc
agccaggagcttgatgttaaacgaagagaagcaatctacaatgacgtattgacaaaacaa
cagatgttaatcagctgtgttcagcgaatacttatgaaccgaaggctccagcagcagtac
aatcagcagcaacagcagcaaatgacttatcaacaagcaacactgggtcacctcatgatg
ccaaagcctccaaatttaatcatgaatccttctaactaccagcagattgatatgagagga
atgtatcagtcagtggctggtggtatgcagccaccaccattacagcgtgcaccaccccca
atgagaagcaaaaatccgggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
