Phocoena sinus (vaquita): 116747322
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Entry
116747322 CDS
T07759
Symbol
ARHGEF6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04518
Integrin signaling
psiu04810
Regulation of actin cytoskeleton
psiu05212
Pancreatic cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
116747322 (ARHGEF6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116747322 (ARHGEF6)
09160 Human Diseases
09162 Cancer: specific types
05212 Pancreatic cancer
116747322 (ARHGEF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116747322 (ARHGEF6)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116747322 (ARHGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
CH
SH3_9
SH3_1
PH
SOS1_NGEF_PH
CAMSAP_CH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
116747322
NCBI-ProteinID:
XP_032475068
Ensembl:
ENSPSNG00000012148
LinkDB
All DBs
Position
X:complement(115975879..116093565)
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AA seq
773 aa
AA seq
DB search
MNPEERIVTWLISLGVLDSPKKTICDPEEFLKSSLKNGVVLCKLINRLRPGSVEKYCLEP
QTEADCTNNINDFLKGCAALQVEVFDPDDLHAGVNFSKVLSTLLAVNKATEDQLSERPCG
RSSSLSAANSSQTNSQGAVSSTAPGLQRQSKPVEMTENGSHQLIVKARFNFKQTNEDELS
VCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERPLSPKAVKGFETTPLTKN
YYTVVLQNILDTEKEYAKELQSLLVTYLRPLQSNNNLSTVEFTSLLGNFEEVCTFQQTLC
QALEECSKFPENQHKVGGCLLNLMPHFKSMYLAYCANHPSAVNVLTQHSDDLERFMENQG
ASSPGILILTTSLSKPFMRLEKYVTLLQELERHMEDTHPDHQDILKAIIAFKTLMGQCQD
LRKRKQLELQILSEPIQAWEGEDIKTLGNVIFMSQVMVQYGTCEEKEERYLMLFSSVLIM
LSASPRMSGFIYQGKIPIAGMVVTRLDEIEGNDYTFEITGNIVERIVVHCGNNQDFQDWL
EHLYRLIRGPTSCSSLSKTSSSSCSAHSTFSQSFSSTGQPRGPLEPPQIIKPWSLSCLRP
APPLRPSAALGYKEESGKSPKTMKKFLHKRKTERKPSEEEYVIRKSTAALEEDAQILKVI
EAYCTSANFQQGHGSSARKDSVPQVLLPEEEKLIIEETRSNGQTVIEEKSLVDTVYALKD
EVKELKQENKRMKQCLEEELKSRRDLEKLVRRLLKQTDECIRAESSSKTSILP
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaagaacgcatcgtgacatggcttatatctttgggagtattagattccccc
aaaaagaccatctgtgatccggaggagttcttgaagtcctcactgaaaaatggggtagta
ctatgcaaactgatcaacagacttaggcctggctctgtagaaaagtactgtctggagccc
caaactgaagctgactgtaccaacaacatcaatgacttcctgaaaggatgtgcagccctt
caagtggaggtatttgatcctgatgaccttcatgcaggggtcaatttctccaaggttctg
agcactcttttagctgtcaacaaagcaacagaagatcagctctcagaaaggccatgtgga
cgttcctcttctcttagcgctgctaatagctctcagacaaactcacagggagcagtttct
agcacagctccagggctgcaaaggcagtcaaagccagtggagatgacggaaaatggaagt
catcagttgatagtaaaggcgagattcaactttaagcagactaatgaagatgaactgtct
gtctgtaaaggggacatcatttatgtcactagagttgaagaaggaggctggtgggaaggc
acattaaatgggagaacaggctggttccctagtaattatgtccgagaaattaaatccagt
gagagacctctctcgcccaaggctgtcaaaggatttgaaactactccacttaccaagaat
tattatactgtggtgttacagaatatcttggacactgaaaaagagtatgctaaagaactt
cagtctcttcttgttacttacttaagacccctgcagtccaataacaatctgagtactgtg
gaatttacatctttattgggaaacttcgaggaagtatgcacgtttcaacagacgctctgc
caagccttggaagaatgttcaaagtttccagaaaaccaacacaaagtaggtggttgtcta
ctgaacctcatgcctcattttaaatctatgtatctggcttactgtgcaaatcatccttca
gctgtaaatgtactcacccagcacagtgatgatctggaacgatttatggaaaatcaaggt
gcatctagcccaggtatcctcattttaacaacaagtctcagcaaacctttcatgcgactg
gaaaagtatgttactctcttgcaagagttggaacggcatatggaggatacgcatccagat
caccaggatattctgaaagcaatcatagcattcaaaactctcatggggcagtgccaagat
ctcagaaagagaaagcagctggagttgcagatactttcggaacctattcaggcatgggaa
ggggaggatattaaaaccttggggaatgtgatctttatgtcgcaagtaatggtgcagtat
ggaacatgtgaggaaaaagaggagcggtacctcatgttattttcaagtgtcttgataatg
ttatctgcaagtcctcggatgagtggctttatctatcagggaaaaataccaatagcagga
atggtggtgactagattagatgaaattgaagggaatgactacacatttgaaatcactggt
aacatagtagagagaattgtggtccactgcggcaacaaccaggacttccaggattggctg
gagcatctgtacaggctgataagaggacccacctcttgcagttccttatccaaaacatca
tcgtcatcttgtagtgctcattccacattctcccagtcttttagctctactggacagccc
cgaggacccttggagcctcctcaaattataaaaccgtggagcttaagttgtctgcgacct
gcgcctccacttagaccatcagcagcgctaggttataaagaggaatctggtaaaagcccc
aaaacgatgaagaagtttcttcacaaaagaaagaccgaaagaaagccatcggaggaggaa
tatgtcatccgcaaaagtacggctgctctggaagaggacgctcagattctgaaagtgatc
gaagcctactgtaccagtgccaactttcaacaaggccacggctcaagtgctcgcaaggat
tccgttccccaagtcttactccccgaggaagagaaactcatcattgaagagaccagaagc
aacggccagaccgtcattgaagaaaagagccttgtcgatactgtttatgccttgaaggat
gaggtcaaagagctgaaacaggagaataaaagaatgaagcagtgcctggaagaagagttg
aaatcaagaagggacctagaaaagctggtccggaggctgttgaagcaaactgatgagtgt
attcgggccgagtccagtagcaagacctccattctcccataa
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integrated database retrieval system
