Phocoena sinus (vaquita): 116747325
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Entry
116747325 CDS
T07759
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04622
RIG-I-like receptor signaling pathway
psiu05161
Hepatitis B
psiu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116747325 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116747325 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
116747325 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747325 (DDX3X)
03041 Spliceosome [BR:
psiu03041
]
116747325 (DDX3X)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116747325 (DDX3X)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116747325 (DDX3X)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116747325 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
116747325 (DDX3X)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116747325 (DDX3X)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116747325 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116747325
NCBI-ProteinID:
XP_032475075
Ensembl:
ENSPSNG00000014476
UniProt:
A0A8C9CFY2
LinkDB
All DBs
Position
X:36959480..36975484
Genome browser
AA seq
667 aa
AA seq
DB search
MGTFLVLRAPALAACAARIPFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDK
DSSGWSSSKDKDAYSSFGCRSDSRGKSSFFSDRGSGSRGRFDDRGRGDYDSIGSRGERGG
FGKYERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNC
PPHIESFSDLEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL
LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV
RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM
GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENI
TQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR
SQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV
GNLGLATSFFNERNVNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSG
GFGARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQ
GVDWWGN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggggacctttctggtcctgagggctccggctctcgcggcgtgcgcggctcggattccg
tttgctggcctagacctgaactcttctgataatcagagtggaggaagtaccgccagcaaa
gggcgctatattcctcctcacttaaggaacagagaagctactaaaggattctatgataaa
gacagttcagggtggagttctagtaaagataaggatgcatacagcagttttggttgccgt
agtgattcaagagggaagtctagtttcttcagtgatcgtggaagtggatcaaggggaagg
tttgatgatcgtggacgaggtgactatgacagcattggcagccgtggtgaaagaggtggc
tttggaaaatatgaacgtggtggaaacagtcgctggtgtgacaaatcagatgaagatgat
tggtcaaaaccactcccgccaagtgaacgcttggaacaagaacttttttctggaggcaac
accgggattaactttgaaaaatacgatgacattccagttgaggcaacaggcaacaactgt
cctccacacattgaaagtttcagtgatcttgagatgggagagattattatgggaaacatt
gagcttactcgctacactcgtccaactccagtgcaaaagcatgctattcctattatcaaa
gagaagagagacttgatggcttgtgcccaaacagggtctggaaaaactgcagcatttctc
ttgcccatcttgagtcagatttattctgatggtccaggcgaggctttgagggccatgaag
gaaaatggaaggtatgggcgccgcaaacaatacccaatctccttggtgttagcaccaact
agagaattggctgtacagatctatgaggaagccaggaaattttcataccgatctagagtt
cgtccttgcgtggtttatggtggtgctgatattggtcagcaaattcgagacttagaacgt
ggatgtcacttgttagtagccactccaggacgtctagtggatatgatggaaagagggaag
attggattagacttctgcaaatacttggtgttagatgaagctgatcggatgttggatatg
gggtttgagcctcaaatacgtagaatcgttgaacaagatactatgccaccaaagggagtt
cgccacactatgatgtttagtgctaccttcccgaaggaaatacagatgcttgctcgtgat
ttcttggatgagtatatctttctggccgtaggaagagttggctctacctctgagaacatc
acacagaaagtagtctgggtggaagagtcagacaaacggtcatttctgcttgaccttcta
aatgcaacaggcaaagattcactgaccttagtgtttgtggagaccaaaaagggtgcagat
tctctagaggatttcttgtaccatgaaggatatgcctgtacgagtatccatggagaccga
tctcagagagatagagaagaggctcttcaccagttccgctcaggaaaaagcccgattcta
gtggctacagcagtagcagcaagaggactggacatttcaaatgtgaaacatgttatcaat
tttgatttgcccagtgatattgaagaatatgtacatcgcattggccgtacaggacgtgta
ggaaaccttggccttgccacatcattctttaatgagaggaacgtaaatattaccaaggat
ttgttggatcttcttgttgaagctaaacaagaagtgccatcttggttagaaaacatggct
tatgaacatcactacaagggtagcagccgtggacgatccaaaagtagtagattcagtgga
ggatttggtgccagagactatcgacagagtagtggtgccagcagttccagcttcagcagc
agccgcgccagcagcagccgcagtggtggaggcggccatggcagcagcagagggtttggt
ggaggtggctatggaggcttttacaacagtgatggatatggaggaaattataactcccag
ggggttgactggtggggtaactga
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