Phocoena sinus (vaquita): 116747335 Help Entry 116747335         CDS       T07759                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism psiu  Phocoena sinus (vaquita) Pathway psiu03013   Nucleocytoplasmic transport psiu03040   Spliceosome Brite KEGG Orthology (KO) [BR:psiu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116747335 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     116747335 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:psiu03019]     116747335 (THOC2)    03041 Spliceosome [BR:psiu03041]     116747335 (THOC2) Messenger RNA biogenesis [BR:psiu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      116747335 (THOC2) Spliceosome [BR:psiu03041]  Complex C   Other components    EJC/TREX     116747335 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     116747335 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  116747335 NCBI-ProteinID:  XP_032475137 Ensembl:  ENSPSNG00000018864 LinkDB All DBs Position X:complement(105009888..105113176) Genome browser AA seq 1642 aa AA seqDB search MAAATVLVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTSRDFQQALYELSCHVIKGN LKHEQASNVLNDISEFREDMPSILADVFCVLDIETNCLEEKSKRDYFTQLVLTCLHLVSD TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG QDLSGNTTSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE PQTLCHILGFKFKFYQFWLHWVFVAACWLSLVAEPNGETPSSLYRVAAVLLQFNLIDLDD LYVHLLPADNCIMDEHKREIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDN QKLGLLEALLKIGDWQHAQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKG AKGSPVNALQNKRAPKQAESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEF QSDGSKQEDKEKTEVILSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRL YGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYI LSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLA SFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAM TGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHL KLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYA HHISSKYDELKKSEKGNKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYAT FWSLTMYDLAVPHTSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEK KQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELV HQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKE CGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNI LIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPE NEFHHKDPPPRNAIASVQNGPGGGPSSSSVGSASKSDESSNEETDKSRERSQCGVKAVNK ASSATPKGNSSNGNSGSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGGKDGKEK PKEERPNKDEKARETKERTPKSDKEKEKFKKEEKVKDEKFKTTVPNAESKSTQEKEREKE PSRERDIAKEMKLKENVKGEKTPVSGSLKSPVPRSDIAEPEREQKRRKIDTYPSPSHSAT VKLVYFQVTAILPKVPLGSENYASSPVISIHFLQDSLIELKESSAKLYINHTPPPLSKSK EREMDKKDLDKSRERSREREKKDEKDRKDRKRDHSNNDREVPPDLTKRRKEENGTMGVSK HKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKK EKRDSSGGKEEKKHHKSSDKHR NT seq 4929 nt NT seq  +upstreamnt  +downstreamnt atggcggccgcgactgtcttggttcccgtagagtggataaagaactgggagaaatcaggg agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca acttctagagatttccagcaagctctttatgagttatcatgccatgtcattaaaggaaat ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg ccatccattcttgccgacgtattctgtgtattagatattgagacaaattgtttagaagaa aaaagcaagagagactattttacacaattggtattaacatgtttgcatttagtttcagac acagttcttaaggaacgcttggatccagaaacattggaatcattagggcttatcaaacaa tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa aaatttaatctgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg caagatttatctggaaatactactagtgatttaatcttagaaaatatcaaatctttaata ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccagttttggctgcat tgggtcttcgttgctgcgtgctggctttctctagttgcggaaccaaatggagagactcct tcatctttgtacagagttgcagcagtacttctacaatttaatcttattgatttagatgat ctttatgtacatcttcttccagctgataattgcattatggatgaacacaaacgagaaatt gtagaagctaagcagattgttagaaaacttacaatggttgtactgtcttccgataaaatt gacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagccacctgacaac caaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcatgcacagaac attatggatcagatgcctccatactatgcagcttcacataaactaatagcccttgctatt tgcaagcttattcatataactattgagcctctctaccgaagagttggcgttcctaaaggt gctaaaggctcacctgttaatgctttacaaaataagagagcaccaaaacaagcagagagc tttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtcctcacctttct catgatcccattttattcgcaaaagtggtgcggataggcaagtcatttatgaaggagttt cagtctgatggaagcaaacaagaagataaagagaagacggaagttatccttagctgcttg cttagcattactgaccaggtattacttccatctctttctttgatggactgcaatgcttgt atgtctgaggaactgtggggaatgtttaaaacatttccatatcagcatagatatcgtctg tatggccagtggaagaatgaaacttacaacagtcatccacttttagtaaaagttaaagct caaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtgaagcct tctggaagacaaattgggaagttgagccacagcaatccaaccattttgtttgattatatc ttgtcacaaatacagaagtatgataacttaataacgcctgtagtagattcattgaaatac ctcacttcgttgaattatgacgtcttggcctattgtatcattgaagctttagctaatcca gaaaaggagagaatgaaacatgacgacacaaccatctcaagctggcttcagagtctggct agtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtcttcttcaatat gtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaagaagtggta caaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaactagaggccatg actggtggagagcaactaaaagctgagggtggttactttggccagataagaaacactaaa aaatcctcccagagattaaaggatgcactattagaccatgatcttgctcttcctctctgt ttgcttatggctcagcagaggaatggggtaatctttcaggaaggtggagagaaacatttg aaactcgtgggaaagctctatgatcagtgtcatgataccctggtacagtttggtgggttt ttagcatctaatctaagcacagaagattatataaagcgagtgccttcaattgatgtgctc tgtaatgaatttcacacaccccatgatgcagcatttttcctgtctaggccaatgtatgca caccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaaataaacagcaa cataaagttcacaagtacattacatcatgtgaaatggtgatggctcctgtccatgaagca gtggtttccttacatgtttccaaagtctgggacgacatcagccctcaattctatgccaca ttctggtcattgacaatgtatgaccttgcagttccacataccagctatgaacgggaagtc aataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcctccaaataaa aagaaaaaagaaaaggagcgatgtactgcccttcaggacaagcttcttgaagaagaaaag aagcagatggaacatgtacagcgagtgctacagagactgaaactggaaaaggacaattgg cttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctgtgtatattt cctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgttgaattggta catcaacagaaaactccaaatttttccacacttctttgctatgatcgagttttctctgat ataatttacacagtcgcaagctgtactgaaaatgaagctagtcgatatgggagattcctt tgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatatgaaaaggaa tgtggaaattatccaggatttcttactatattacgggcaactggttttgatggtggaaat aaagctgatcaattagactatgaaaattttcgacacgttgtacataaatggcattacaaa ctaaccaaggcatcggtacattgccttgaaacaggcgaatatactcacatcaggaatatc ttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctgggtcaggct ttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggccagatctatat gcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatgatacctgaa aatgagtttcatcacaaagacccccctccgaggaatgcaattgccagtgtacaaaatggg cctggcggtgggccttcttcatcgtcagtaggaagtgcatctaaatcggatgaaagcagt aatgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagcagttaataaa gcttctagtgccacaccaaaagggaattcaagcaatggaaatagtggctctaacagcagc aaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaaaaagagaaaaaagaa aagactccagctactactccagaggcccgagtacttggtggtaaagatggtaaagaaaaa ccgaaggaagaacggccaaataaagatgaaaaagcaagagagacgaaggaaagaacacct aagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagttaaagatgagaaattc aagaccactgtccccaatgcagaatcaaagtcgactcaagaaaaggaaagagagaaggag ccatccagagaaagagatatagcaaaggaaatgaaattaaaggaaaatgttaaaggagag aaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatattgcagagcct gaaagggaacaaaaacgtcgcaaaattgatacctacccttctccatcacattccgcaaca gtaaagctggtttatttccaggttacagccatacttcccaaagttcctctgggttctgag aactatgccagctcacctgtcatctccattcattttctacaggacagtctcatcgaactc aaggagtcttcagcaaagctctacattaatcatactcctccaccactgtccaagagtaag gagagagaaatggacaagaaagatttggacaagtcgagggaaagatccagagaaagagaa aaaaaagatgaaaaggacaggaaagaccggaaaagggatcactcaaacaatgaccgagaa gtgccaccggacttaaccaagaggcggaaagaggaaaatggaacaatgggggtttcaaaa cacaaaagtgagagtccgtgtgagtctccttatccaaatgagaaagacaaggaaaaaaat aagtcaaaatcgtcaggcaaagaaaaaggcggtgactcatttaaatctgaaaaaatggat aaaatctcctctggtggcaaaaaggagtccaggcatgataaagaaaagatagaaaagaaa gagaaacgggacagttcaggaggaaaggaagagaagaaacatcataagtcctcggacaag cacagataa

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