Phocoena sinus (vaquita): 116747343
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Entry
116747343 CDS
T07759
Symbol
LAMP2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03272
Virion - Hepatitis viruses
psiu03273
Virion - Lassa virus and SFTS virus
psiu04140
Autophagy - animal
psiu04142
Lysosome
psiu04145
Phagosome
psiu05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116747343 (LAMP2)
03272 Virion - Hepatitis viruses
116747343 (LAMP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116747343 (LAMP2)
04142 Lysosome
116747343 (LAMP2)
04140 Autophagy - animal
116747343 (LAMP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
116747343 (LAMP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116747343 (LAMP2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116747343 (LAMP2)
04090 CD molecules [BR:
psiu04090
]
116747343 (LAMP2)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
116747343 (LAMP2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
116747343 (LAMP2)
Other autophagy associated proteins
RNautophagy/DNautophagy
116747343 (LAMP2)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
116747343 (LAMP2)
CD molecules [BR:
psiu04090
]
Proteins
116747343 (LAMP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Toast-rack_PspC-Cterm
TCTN_DUF1619
SSrecog
CTV_P6
Motif
Other DBs
NCBI-GeneID:
116747343
NCBI-ProteinID:
XP_032475173
Ensembl:
ENSPSNG00000017367
UniProt:
A0A8C9CG25
LinkDB
All DBs
Position
X:complement(102307849..102343102)
Genome browser
AA seq
411 aa
AA seq
DB search
MVCFRLAPVPGSGLLLLCLVLGAVSSYALELNLTDSENATCLYAKWQMNFTIRYETTDKH
NKTVTISDLGPATYSGSSCGDDQNGPKIAVQFGSGFSWIVNFTEETSFYSIDNISFSYNT
NDNTTFPDAKEKGVFTVSDHVAFRVPLNDIFRCSSLLTLGKNDVVQHYWDVHVQAFVQNG
TVSTKEFLCDKDKTLTTVLPIVPTTVPSPTTTPSPKEKPEVGSYSVVNSNGTCLLATMGL
QLNITHDKVASVININPNTTNFTGSCHPQTALLRLSSSSIKYLDFVFAVKNENRFYLKEV
NVSMYLVNGSVFSIANNNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFDLRVQPFNVME
GKYSTAQDCSADDDNFLVPIAVGAALAGVLILVLLAYFIGLKRHHAGYEQF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcttccgcctcgccccggttccgggatccgggctccttctgctctgcctcgtc
ctgggagctgtctcgtcttatgcattggaacttaatttgacagattcagaaaacgccact
tgcctttatgcaaaatggcagatgaatttcacaatacgctatgagaccacagacaaacat
aataaaactgtaaccatttcagaccttggtcctgcaacgtacagtggaagctcttgtggg
gatgaccagaatggtcccaaaatcgcagtgcagtttggatctggtttttcctggattgtg
aattttacagaggagacatctttttattcaatcgacaatatctcattttcctacaacacg
aatgataacacaacatttcctgatgcgaaagaaaaaggagtttttactgtttctgaccat
gtggcattcagagttccattgaatgacatctttagatgcagtagtttattaaccttagga
aagaatgatgttgtccagcactattgggatgttcatgtacaagcttttgtccaaaatggc
acagtgagcacaaaagagtttttgtgtgataaagataaaactttaaccacagtgctgccc
atcgttcccaccactgtgccatctcctactacaacaccctctccaaaggaaaagccagag
gttggatcctactcagttgtaaacagcaatgggacatgtcttctggctaccatggggctg
cagctgaacattactcatgataaggttgcttcggttattaacatcaatcccaacacaacc
aacttcactggcagctgccaccctcaaactgctctacttaggctgagcagcagcagcatc
aagtatctggactttgtctttgctgtgaaaaatgaaaaccgattctatctaaaggaggtg
aatgtcagcatgtatttggttaacggctctgtttttagcattgcaaataacaatctcagc
tactgggatgcccccctgggaagttcttacatgtgcaacaaagagcagactgtttcagtg
tctggagcatttcagataaatacctttgatctaagggttcagcctttcaatgtgatggaa
ggaaagtattctacagctcaagactgcagtgcagatgacgacaacttccttgtgcccata
gcggtgggagcagccttggcaggagtgcttattctagtgttgctggcttactttattggt
ctcaagcgccatcatgctggatatgagcaattttag
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